RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 SHISA4Q96DD7 197 aa24.98■■□□□ 1.59
C9orf3-222ENST00000496567 CYP39A1Q9NYL5 469 aa24.98■■□□□ 1.59
C9orf3-222ENST00000496567 KCNJ14Q9UNX9 436 aa24.98■■□□□ 1.59
C9orf3-222ENST00000496567 SLC15A5A6NIM6 579 aa24.97■■□□□ 1.59
C9orf3-222ENST00000496567 PIK3CDO00329 1044 aa24.97■■□□□ 1.59
C9orf3-222ENST00000496567 HSD17B4P51659 736 aa24.97■■□□□ 1.59
C9orf3-222ENST00000496567 FOSBP53539 338 aa24.97■■□□□ 1.59
C9orf3-222ENST00000496567 BRMS1Q9HCU9 246 aa24.97■■□□□ 1.59
C9orf3-222ENST00000496567 GJB4Q9NTQ9 266 aa24.97■■□□□ 1.59
C9orf3-222ENST00000496567 RBBP6Q7Z6E9 1792 aaKnown RBP24.97■■□□□ 1.59
C9orf3-222ENST00000496567 ECM2O94769 699 aaPredicted RBP24.97■■□□□ 1.59
C9orf3-222ENST00000496567 RPS6P62753 249 aaKnown RBP24.97■■□□□ 1.59
C9orf3-222ENST00000496567 BAATQ14032 418 aaPredicted RBP24.97■■□□□ 1.59
C9orf3-222ENST00000496567 GRB14Q14449 540 aa24.97■■□□□ 1.59
C9orf3-222ENST00000496567 TBC1D5Q92609 795 aa24.97■■□□□ 1.59
C9orf3-222ENST00000496567 PCDHA4Q9UN74 947 aa24.97■■□□□ 1.59
C9orf3-222ENST00000496567 MGAMO43451 1857 aa24.96■■□□□ 1.59
C9orf3-222ENST00000496567 PLXNB2O15031 1838 aa24.96■■□□□ 1.59
C9orf3-222ENST00000496567 H3BQV1 296 aa24.96■■□□□ 1.59
C9orf3-222ENST00000496567 MEIS2O14770 477 aa24.96■■□□□ 1.59
C9orf3-222ENST00000496567 MMP1P03956 469 aa24.96■■□□□ 1.59
C9orf3-222ENST00000496567 HSPA1AP0DMV8 641 aaKnown RBP24.96■■□□□ 1.59
C9orf3-222ENST00000496567 HSPA1BP0DMV9 641 aaKnown RBP24.96■■□□□ 1.59
C9orf3-222ENST00000496567 PDIA4P13667 645 aaKnown RBP24.96■■□□□ 1.59
C9orf3-222ENST00000496567 SAFBQ15424 915 aaKnown RBP eCLIP24.96■■□□□ 1.59
C9orf3-222ENST00000496567 IFFO2Q5TF58 517 aa24.96■■□□□ 1.59
C9orf3-222ENST00000496567 DAGLBQ8NCG7 672 aa24.96■■□□□ 1.59
C9orf3-222ENST00000496567 CD99L2Q8TCZ2 262 aa24.96■■□□□ 1.59
C9orf3-222ENST00000496567 TRIM47Q96LD4 638 aa24.96■■□□□ 1.59
C9orf3-222ENST00000496567 ARHGAP39Q9C0H5 1083 aa24.96■■□□□ 1.59
C9orf3-222ENST00000496567 GNRH1P01148 92 aa24.95■■□□□ 1.58
C9orf3-222ENST00000496567 ADORA2AP29274 412 aa24.95■■□□□ 1.58
C9orf3-222ENST00000496567 CTGFP29279 349 aa24.95■■□□□ 1.58
C9orf3-222ENST00000496567 MCTP2Q6DN12 878 aa24.95■■□□□ 1.58
C9orf3-222ENST00000496567 USP17L6PQ6QN14 398 aa24.95■■□□□ 1.58
C9orf3-222ENST00000496567 BLIDQ8IZY5 108 aa24.95■■□□□ 1.58
C9orf3-222ENST00000496567 REXO1Q8N1G1 1221 aaKnown RBP24.95■■□□□ 1.58
C9orf3-222ENST00000496567 SOCS4Q8WXH5 440 aa24.95■■□□□ 1.58
C9orf3-222ENST00000496567 NUDT12Q9BQG2 462 aa24.95■■□□□ 1.58
C9orf3-222ENST00000496567 POTEB2H3BUK9 544 aa24.94■■□□□ 1.58
C9orf3-222ENST00000496567 HOXD10P28358 340 aa24.94■■□□□ 1.58
C9orf3-222ENST00000496567 HOXA13P31271 388 aaPredicted RBP24.94■■□□□ 1.58
C9orf3-222ENST00000496567 GUCY1B3Q02153 619 aa24.94■■□□□ 1.58
C9orf3-222ENST00000496567 MORN1Q5T089 497 aa24.94■■□□□ 1.58
C9orf3-222ENST00000496567 SLC30A10Q6XR72 485 aa24.94■■□□□ 1.58
C9orf3-222ENST00000496567 SLC5A4Q9NY91 659 aa24.94■■□□□ 1.58
C9orf3-222ENST00000496567 FOXN1O15353 648 aa24.93■■□□□ 1.58
C9orf3-222ENST00000496567 KRT2P35908 639 aa24.93■■□□□ 1.58
C9orf3-222ENST00000496567 CTCFP49711 727 aaPredicted RBP24.93■■□□□ 1.58
C9orf3-222ENST00000496567 NPY5RQ15761 445 aa24.93■■□□□ 1.58
C9orf3-222ENST00000496567 UBE2SQ16763 222 aa24.93■■□□□ 1.58
C9orf3-222ENST00000496567 SYTL5Q8TDW5 730 aaPredicted RBP24.93■■□□□ 1.58
C9orf3-222ENST00000496567 ZNF236Q9UL36 1845 aa24.93■■□□□ 1.58
C9orf3-222ENST00000496567 DNAJC25-GNG10A0A024R161 153 aa24.93■■□□□ 1.58
C9orf3-222ENST00000496567 FOSP01100 380 aaPredicted RBP24.93■■□□□ 1.58
C9orf3-222ENST00000496567 SYT1P21579 422 aa24.93■■□□□ 1.58
C9orf3-222ENST00000496567 CLK2P49760 499 aaKnown RBP24.93■■□□□ 1.58
C9orf3-222ENST00000496567 AP3B2Q13367 1082 aa24.93■■□□□ 1.58
C9orf3-222ENST00000496567 DPP9Q86TI2 863 aa24.93■■□□□ 1.58
C9orf3-222ENST00000496567 BIN2Q9UBW5 565 aaPredicted RBP24.93■■□□□ 1.58
C9orf3-222ENST00000496567 SPDYE3A6NKU9 549 aa24.92■■□□□ 1.58
C9orf3-222ENST00000496567 PGK2P07205 417 aa24.92■■□□□ 1.58
C9orf3-222ENST00000496567 HSPA8P11142 646 aaKnown RBP24.92■■□□□ 1.58
C9orf3-222ENST00000496567 MAP2K5Q13163 448 aa24.92■■□□□ 1.58
C9orf3-222ENST00000496567 FCHSD1Q86WN1 690 aa24.92■■□□□ 1.58
C9orf3-222ENST00000496567 DIS3L2Q8IYB7 885 aaKnown RBP24.92■■□□□ 1.58
C9orf3-222ENST00000496567 IPO9Q96P70 1041 aaKnown RBP24.92■■□□□ 1.58
C9orf3-222ENST00000496567 GJD2Q9UKL4 321 aa24.92■■□□□ 1.58
C9orf3-222ENST00000496567 ZNFX1Q9P2E3 1918 aaKnown RBP24.92■■□□□ 1.58
C9orf3-222ENST00000496567 RGS2P41220 211 aa24.91■■□□□ 1.58
C9orf3-222ENST00000496567 FAM133AQ8N9E0 248 aa24.91■■□□□ 1.58
C9orf3-222ENST00000496567 DNERQ8NFT8 737 aa24.91■■□□□ 1.58
C9orf3-222ENST00000496567 EHMT1Q9H9B1 1298 aa24.91■■□□□ 1.58
C9orf3-222ENST00000496567 ADD3Q9UEY8 706 aaKnown RBP24.91■■□□□ 1.58
C9orf3-222ENST00000496567 DIS3Q9Y2L1 958 aaKnown RBP24.91■■□□□ 1.58
C9orf3-222ENST00000496567 GNL2Q13823 731 aaKnown RBP24.9■■□□□ 1.58
C9orf3-222ENST00000496567 JAKMIP3Q5VZ66 844 aa24.9■■□□□ 1.58
C9orf3-222ENST00000496567 USP6NLQ92738 828 aa24.9■■□□□ 1.58
C9orf3-222ENST00000496567 PCDHA6Q9UN73 950 aa24.9■■□□□ 1.58
C9orf3-222ENST00000496567 PCDHA8Q9Y5H6 950 aa24.9■■□□□ 1.58
C9orf3-222ENST00000496567 ZSWIM8A7E2V4 1837 aa24.9■■□□□ 1.58
C9orf3-222ENST00000496567 VPS37CA5D8V6 355 aaPredicted RBP24.89■■□□□ 1.58
C9orf3-222ENST00000496567 M0R2N6 131 aa24.89■■□□□ 1.58
C9orf3-222ENST00000496567 STX6O43752 255 aa24.89■■□□□ 1.58
C9orf3-222ENST00000496567 COBLO75128 1261 aa24.89■■□□□ 1.58
C9orf3-222ENST00000496567 HOXC6P09630 235 aa24.89■■□□□ 1.58
C9orf3-222ENST00000496567 CNTN2Q02246 1040 aa24.89■■□□□ 1.58
C9orf3-222ENST00000496567 ZNF792Q3KQV3 632 aa24.89■■□□□ 1.58
C9orf3-222ENST00000496567 FOXP1Q9H334 677 aaPredicted RBP24.89■■□□□ 1.58
C9orf3-222ENST00000496567 COL20A1Q9P218 1284 aa24.89■■□□□ 1.58
C9orf3-222ENST00000496567 SRRDQ9UH36 339 aa24.89■■□□□ 1.58
C9orf3-222ENST00000496567 DOCK3Q8IZD9 2030 aa24.89■■□□□ 1.57
C9orf3-222ENST00000496567 BTBD18B2RXH4 712 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 PRMT2P55345 433 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 CAP1Q01518 475 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 OXER1Q8TDS5 423 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 NSUN6Q8TEA1 469 aaKnown RBP24.88■■□□□ 1.57
C9orf3-222ENST00000496567 TAAR1Q96RJ0 339 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 RMDN3Q96TC7 470 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 TMEM260Q9NX78 707 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms