RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 CACNA2D1P54289 1103 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 MRPS25P82663 173 aaKnown RBP8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 NECTIN1Q15223 517 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 TBC1D5Q92609 795 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 MAP4K1Q92918 833 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 SLC5A4Q9NY91 659 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 R3HDM2Q9Y2K5 976 aaKnown RBP8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 GMEB1Q9Y692 573 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 H7C1W4 665 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 AGPSO00116 658 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 CIB2O75838 187 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 COPS2P61201 443 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ADCY1Q08828 1119 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 CUL1Q13616 776 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 AGBL2Q5U5Z8 902 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ZNF554Q86TJ5 538 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ERICH1Q86X53 443 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 OGFOD1Q8N543 542 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 RAPGEF5Q92565 580 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 KRT12Q99456 494 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 PREBQ9HCU5 417 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 MTRF1LQ9UGC7 380 aaKnown RBP8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ZMYM6O95789 1325 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ZFYVE16Q7Z3T8 1539 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 POLR2DO15514 142 aaKnown RBP8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 PDE5AO76074 875 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ALOX15P16050 662 aaPredicted RBP8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ALDH5A1P51649 535 aaPredicted RBP8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ZBED6P86452 979 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 KIF2BQ8N4N8 673 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ABHD8Q96I13 439 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 TRIM47Q96LD4 638 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 PYM1Q9BRP8 204 aaKnown RBP8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ALG1Q9BT22 464 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 YIPF2Q9BWQ6 316 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 TSPYL2Q9H2G4 693 aaPredicted RBP8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 CDC42BPBQ9Y5S2 1711 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ADGBQ8N7X0 1667 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 IFIT3O14879 490 aaKnown RBP8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 VHLP40337 213 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 PCYT1AP49585 367 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ZNF827Q17R98 1081 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 SOGA3Q5TF21 947 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 SPTY2D1Q68D10 685 aaPredicted RBP8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ZBTB8BQ8NAP8 495 aaPredicted RBP8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 NSUN7Q8NE18 718 aaKnown RBP8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 RAB3IL1Q8TBN0 382 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 COG3Q96JB2 828 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 ZNF570Q96NI8 536 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 PANK4Q9NVE7 773 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 CTNND2Q9UQB3 1225 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 COMMD3-BMI1R4GMX3 469 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 PDLIM1O00151 329 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 MAGEA1P43355 309 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 ARPC4P59998 168 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 SLC39A14Q15043 492 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 MAEAQ7L5Y9 396 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 AGGF1Q8N302 714 aaeCLIP8.94□□□□□ -0.981e-8■□□□□ 9.4
CRNKL1-205ENST00000496549 ATL2Q8NHH9 583 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 NRDE2Q9H7Z3 1164 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 ADCY9O60503 1353 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 A0A1W2PRG0 241 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 SMAPO00193 183 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 SEMA3EO15041 775 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 ORC4O43929 436 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 MBD4O95243 580 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 TFRCP02786 760 aaKnown RBP8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 ZBTB16Q05516 673 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 TBX2Q13207 712 aaPredicted RBP8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 MYBPC3Q14896 1274 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 PAPD7Q5XG87 772 aaKnown RBP8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 GALNT17Q6IS24 598 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 ELOA2Q8IYF1 753 aaPredicted RBP8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 NCOA5Q9HCD5 579 aaKnown RBP8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 NDUFA13Q9P0J0 144 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 TUBE1Q9UJT0 475 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 ANGPTL2Q9UKU9 493 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 LAMC1P11047 1609 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 A0A1B0GTH6 734 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 TXNDC9O14530 226 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 CYP11B2P19099 503 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 STX2P32856 288 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 PHBP35232 272 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 EPS15P42566 896 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 RNASE9P60153 205 aaKnown RBP8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 FRMPD1Q5SYB0 1578 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 OTUD7BQ6GQQ9 843 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 PI16Q6UXB8 463 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 PPP1R21Q6ZMI0 780 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 FAM227BQ96M60 508 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 PHAXQ9H814 394 aaKnown RBP8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 EXOC1Q9NV70 894 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 IL1RAPL1Q9NZN1 696 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 MAN1B1Q9UKM7 699 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 SNX12Q9UMY4 172 aa8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 USP15Q9Y4E8 981 aaPredicted RBP8.94□□□□□ -0.98
CRNKL1-205ENST00000496549 CDC42BPAQ5VT25 1732 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 IQCA1LA6NCM1 817 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 SP100P23497 879 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms