RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 IPO9Q96P70 1041 aaKnown RBP9.81□□□□□ -0.84
U2AF1-212ENST00000496462 APBA2Q99767 749 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 ANP32EQ9BTT0 268 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 BARHL2Q9NY43 387 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 FAM13BQ9NYF5 915 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 CCDC39Q9UFE4 941 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 MAP2K5Q13163 448 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 DIS3L2Q8IYB7 885 aaKnown RBP9.8□□□□□ -0.84
U2AF1-212ENST00000496462 VPS54Q9P1Q0 977 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 MAD2L2Q9UI95 211 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 BRPF3Q9ULD4 1205 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 NOD1Q9Y239 953 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 ESYT2A0FGR8 921 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 SETQ01105 290 aaPredicted RBP9.8□□□□□ -0.84
U2AF1-212ENST00000496462 GUCY1B3Q02153 619 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 NEDD9Q14511 834 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 KRT40Q6A162 431 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 ATL3Q6DD88 541 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 CKAP2LQ8IYA6 745 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 STAG2Q8N3U4 1231 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 RGS22Q8NE09 1264 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 FAM184BQ9ULE4 1060 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 CASP8AP2Q9UKL3 1982 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 STX6O43752 255 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 GUCY1A2P33402 732 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 SCRN1Q12765 414 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 BAATQ14032 418 aaPredicted RBP9.8□□□□□ -0.84
U2AF1-212ENST00000496462 TOB2Q14106 344 aaPredicted RBP9.8□□□□□ -0.84
U2AF1-212ENST00000496462 ARRDC4Q8NCT1 418 aa9.8□□□□□ -0.84
U2AF1-212ENST00000496462 GPKOWQ92917 476 aaPredicted RBP eCLIP9.8□□□□□ -0.84
U2AF1-212ENST00000496462 BACH1O14867 736 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 MYCP01106 439 aaPredicted RBP9.79□□□□□ -0.84
U2AF1-212ENST00000496462 TRAPPC10P48553 1259 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 SLFN12Q8IYM2 578 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 RIC8AQ9NPQ8 531 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 ATP2A1O14983 1001 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 NKRFO15226 690 aaKnown RBP eCLIP9.79□□□□□ -0.84
U2AF1-212ENST00000496462 MAFGO15525 162 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 ADCY3O60266 1144 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 SNHG28P0DPA3 235 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 PTPREP23469 700 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 CCDC73Q6ZRK6 1079 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 GPR142Q7Z601 462 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 NEK8Q86SG6 692 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 ZNF296Q8WUU4 475 aaPredicted RBP9.79□□□□□ -0.84
U2AF1-212ENST00000496462 AGBL1Q96MI9 1066 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 DIS3Q9Y2L1 958 aaKnown RBP9.79□□□□□ -0.84
U2AF1-212ENST00000496462 KBTBD13C9JR72 458 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 IGF2BP3O00425 579 aaKnown RBP eCLIP9.79□□□□□ -0.84
U2AF1-212ENST00000496462 RARBP10826 455 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 SNAP25P60880 206 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 ORC2Q13416 577 aaPredicted RBP9.79□□□□□ -0.84
U2AF1-212ENST00000496462 LETM2Q2VYF4 491 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 FOXD4L5Q5VV16 416 aaPredicted RBP9.79□□□□□ -0.84
U2AF1-212ENST00000496462 FAM160B1Q5W0V3 765 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 PLA2G4DQ86XP0 818 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 CMTR1Q8N1G2 835 aaKnown RBP9.79□□□□□ -0.84
U2AF1-212ENST00000496462 SRBD1Q8N5C6 995 aaKnown RBP9.79□□□□□ -0.84
U2AF1-212ENST00000496462 CD99L2Q8TCZ2 262 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 SCFD2Q8WU76 684 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 FOXD4L4Q8WXT5 416 aaPredicted RBP9.79□□□□□ -0.84
U2AF1-212ENST00000496462 CALML4Q96GE6 196 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 ANO3Q9BYT9 981 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 LRRC27Q9C0I9 530 aa9.79□□□□□ -0.84
U2AF1-212ENST00000496462 HMX1Q9NP08 348 aaPredicted RBP9.79□□□□□ -0.84
U2AF1-212ENST00000496462 KRT18P05783 430 aaKnown RBP9.78□□□□□ -0.84
U2AF1-212ENST00000496462 EIF2AK2P19525 551 aaKnown RBP9.78□□□□□ -0.84
U2AF1-212ENST00000496462 GJA5P36382 358 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 EVCP57679 992 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 CHMP4BP1P59074 171 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 WWC2Q6AWC2 1192 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 SYAP1Q96A49 352 aaPredicted RBP9.78□□□□□ -0.84
U2AF1-212ENST00000496462 ABHD8Q96I13 439 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 AGXT2Q9BYV1 514 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 MCOLN1Q9GZU1 580 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.78□□□□□ -0.84
U2AF1-212ENST00000496462 RBM19Q9Y4C8 960 aaKnown RBP9.78□□□□□ -0.84
U2AF1-212ENST00000496462 hCG_1642624A0A1W2PR95 340 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 LACTBP83111 547 aaPredicted RBP9.78□□□□□ -0.84
U2AF1-212ENST00000496462 MS4A4AQ96JQ5 239 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 WDR11Q9BZH6 1224 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 SCAND2PQ9GZW5 306 aaPredicted RBP9.78□□□□□ -0.84
U2AF1-212ENST00000496462 NBPF3Q9H094 633 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 PRKAG2Q9UGJ0 569 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 NRBP1Q9UHY1 535 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 PCDHA6Q9UN73 950 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 PCDHA8Q9Y5H6 950 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 ADORA2AP29274 412 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 NOM1Q5C9Z4 860 aaKnown RBP9.78□□□□□ -0.84
U2AF1-212ENST00000496462 PIK3AP1Q6ZUJ8 805 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 DHX37Q8IY37 1157 aaKnown RBP9.78□□□□□ -0.84
U2AF1-212ENST00000496462 NSUN7Q8NE18 718 aaKnown RBP9.78□□□□□ -0.84
U2AF1-212ENST00000496462 FOXP1Q9H334 677 aaPredicted RBP9.78□□□□□ -0.84
U2AF1-212ENST00000496462 R3HDMLQ9H3Y0 253 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 VTA1Q9NP79 307 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 SRRDQ9UH36 339 aa9.78□□□□□ -0.84
U2AF1-212ENST00000496462 ZNF215Q9UL58 517 aaPredicted RBP9.78□□□□□ -0.84
U2AF1-212ENST00000496462 KIAA0100Q14667 2235 aaKnown RBP9.77□□□□□ -0.84
U2AF1-212ENST00000496462 FOXP2O15409 715 aa9.77□□□□□ -0.84
U2AF1-212ENST00000496462 HMGCRP04035 888 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms