RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 MRPL12P52815 198 aaKnown RBP18.32■□□□□ 0.52
HDAC4-213ENST00000496347 TLE2Q04725 743 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 WTAPQ15007 396 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 GNASQ5JWF2 1037 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 IQSEC1Q6DN90 963 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 TAPT1Q6NXT6 567 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 NOL8Q76FK4 1167 aaKnown RBP18.32■□□□□ 0.52
HDAC4-213ENST00000496347 MCF2L2Q86YR7 1114 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 MB21D2Q8IYB1 491 aaPredicted RBP18.32■□□□□ 0.52
HDAC4-213ENST00000496347 TOX2Q96NM4 488 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 PURBQ96QR8 312 aaKnown RBP18.32■□□□□ 0.52
HDAC4-213ENST00000496347 MTA3Q9BTC8 594 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 LSG1Q9H089 658 aaKnown RBP18.32■□□□□ 0.52
HDAC4-213ENST00000496347 JMJD4Q9H9V9 463 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 PCDH10Q9P2E7 1040 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 TAF6LQ9Y6J9 622 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 BAZ2BQ9UIF8 2168 aaKnown RBP18.32■□□□□ 0.52
HDAC4-213ENST00000496347 KLRF2D3W0D1 207 aa18.31■□□□□ 0.52
HDAC4-213ENST00000496347 PQBP1O60828 265 aaKnown RBP18.31■□□□□ 0.52
HDAC4-213ENST00000496347 ASGR1P07306 291 aa18.31■□□□□ 0.52
HDAC4-213ENST00000496347 SMPD1P17405 629 aa18.31■□□□□ 0.52
HDAC4-213ENST00000496347 GRM4Q14833 912 aa18.31■□□□□ 0.52
HDAC4-213ENST00000496347 FSCN1Q16658 493 aaKnown RBP18.31■□□□□ 0.52
HDAC4-213ENST00000496347 LRIT3Q3SXY7 679 aa18.31■□□□□ 0.52
HDAC4-213ENST00000496347 EEPD1Q7L9B9 569 aa18.31■□□□□ 0.52
HDAC4-213ENST00000496347 FBXO11Q86XK2 927 aa18.31■□□□□ 0.52
HDAC4-213ENST00000496347 MTMR8Q96EF0 704 aa18.31■□□□□ 0.52
HDAC4-213ENST00000496347 MAD2L2Q9UI95 211 aa18.31■□□□□ 0.52
HDAC4-213ENST00000496347 MRPL11Q9Y3B7 192 aaKnown RBP18.31■□□□□ 0.52
HDAC4-213ENST00000496347 DDX49Q9Y6V7 483 aaKnown RBP18.31■□□□□ 0.52
HDAC4-213ENST00000496347 A0A0U1RQG5 324 aaPredicted RBP18.3■□□□□ 0.52
HDAC4-213ENST00000496347 PALM3A6NDB9 673 aaPredicted RBP18.3■□□□□ 0.52
HDAC4-213ENST00000496347 CABYRO75952 493 aa18.3■□□□□ 0.52
HDAC4-213ENST00000496347 PDE4DQ08499 809 aa18.3■□□□□ 0.52
HDAC4-213ENST00000496347 DUSP28Q4G0W2 176 aa18.3■□□□□ 0.52
HDAC4-213ENST00000496347 TMEM67Q5HYA8 995 aa18.3■□□□□ 0.52
HDAC4-213ENST00000496347 STAG2Q8N3U4 1231 aa18.3■□□□□ 0.52
HDAC4-213ENST00000496347 AMNQ9BXJ7 453 aa18.3■□□□□ 0.52
HDAC4-213ENST00000496347 AP5M1Q9H0R1 490 aa18.3■□□□□ 0.52
HDAC4-213ENST00000496347 RBM47A0AV96 593 aaKnown RBP18.29■□□□□ 0.52
HDAC4-213ENST00000496347 DCDC2CA8MYV0 355 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 ZBTB5O15062 677 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 KIAA0355O15063 1070 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 ZEB2O60315 1214 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 ANTXR2P58335 489 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 GHRHRQ02643 423 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 TROAPQ12815 778 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 TRAF1Q13077 416 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 GPR153Q6NV75 609 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 CASC1Q6TDU7 716 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 CATIPQ7Z7H3 387 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 SCFD2Q8WU76 684 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 ANO2Q9NQ90 1003 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 PDGFCQ9NRA1 345 aa18.29■□□□□ 0.52
HDAC4-213ENST00000496347 SCN10AQ9Y5Y9 1956 aa18.28■□□□□ 0.52
HDAC4-213ENST00000496347 TRIM43BA6NCK2 446 aa18.28■□□□□ 0.52
HDAC4-213ENST00000496347 SOX1O00570 391 aaPredicted RBP18.28■□□□□ 0.52
HDAC4-213ENST00000496347 NKRFO15226 690 aaKnown RBP eCLIP18.28■□□□□ 0.52
HDAC4-213ENST00000496347 DDAH1O94760 285 aa18.28■□□□□ 0.52
HDAC4-213ENST00000496347 PPP2R5BQ15173 497 aa18.28■□□□□ 0.52
HDAC4-213ENST00000496347 TRIM43Q96BQ3 446 aaPredicted RBP18.28■□□□□ 0.52
HDAC4-213ENST00000496347 SEZ6LQ9BYH1 1024 aa18.28■□□□□ 0.52
HDAC4-213ENST00000496347 WDR11Q9BZH6 1224 aa18.28■□□□□ 0.52
HDAC4-213ENST00000496347 SLC27A2O14975 620 aa18.27■□□□□ 0.52
HDAC4-213ENST00000496347 MCM5P33992 734 aa18.27■□□□□ 0.52
HDAC4-213ENST00000496347 IRX5P78411 483 aaPredicted RBP18.27■□□□□ 0.52
HDAC4-213ENST00000496347 BEX3Q00994 111 aa18.27■□□□□ 0.52
HDAC4-213ENST00000496347 RNF20Q5VTR2 975 aa18.27■□□□□ 0.52
HDAC4-213ENST00000496347 SH3RF1Q7Z6J0 888 aa18.27■□□□□ 0.52
HDAC4-213ENST00000496347 SYTL5Q8TDW5 730 aaPredicted RBP18.27■□□□□ 0.52
HDAC4-213ENST00000496347 IGDCC4Q8TDY8 1250 aa18.27■□□□□ 0.52
HDAC4-213ENST00000496347 NSUN6Q8TEA1 469 aaKnown RBP18.27■□□□□ 0.52
HDAC4-213ENST00000496347 MAP3K14Q99558 947 aa18.27■□□□□ 0.52
HDAC4-213ENST00000496347 LY9Q9HBG7 655 aa18.27■□□□□ 0.52
HDAC4-213ENST00000496347 SENP2Q9HC62 589 aa18.27■□□□□ 0.52
HDAC4-213ENST00000496347 TBX21Q9UL17 535 aa18.27■□□□□ 0.52
HDAC4-213ENST00000496347 COL6A3P12111 3177 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 ARVCFO00192 962 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 DYNC1LI2O43237 492 aaPredicted RBP18.26■□□□□ 0.51
HDAC4-213ENST00000496347 CDC45O75419 566 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 CPT1AP50416 773 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 CDK7P50613 346 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 HSD17B4P51659 736 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 FAAP100Q0VG06 881 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 CREB3L3Q68CJ9 461 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 CXCL17Q6UXB2 119 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 CHST3Q7LGC8 479 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 SAMD3Q8N6K7 520 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 BADQ92934 168 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 CCDC136Q96JN2 1154 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 TMEM87BQ96K49 555 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 IWS1Q96ST2 819 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 RIOX1Q9H6W3 641 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 VAT1LQ9HCJ6 419 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 TMEM39AQ9NV64 488 aa18.26■□□□□ 0.51
HDAC4-213ENST00000496347 MAP3K20Q9NYL2 800 aaKnown RBP18.26■□□□□ 0.51
HDAC4-213ENST00000496347 PRC1O43663 620 aa18.25■□□□□ 0.51
HDAC4-213ENST00000496347 PPP1R11O60927 126 aaPredicted RBP18.25■□□□□ 0.51
HDAC4-213ENST00000496347 RAG1P15918 1043 aa18.25■□□□□ 0.51
HDAC4-213ENST00000496347 KIF5BP33176 963 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms