RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 GNASQ5JWF2 1037 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 ATL3Q6DD88 541 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 CYB5R4Q7L1T6 521 aa9.73□□□□□ -0.85
VPS13B-206ENST00000496144 COL4A5P29400 1685 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 SH2B2O14492 632 aaPredicted RBP9.72□□□□□ -0.85
VPS13B-206ENST00000496144 AKR1B1P15121 316 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 RGS19P49795 217 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 C12orf42Q96LP6 360 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 PTPN18Q99952 460 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 ZNF215Q9UL58 517 aaPredicted RBP9.72□□□□□ -0.85
VPS13B-206ENST00000496144 GABRQQ9UN88 632 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 CCDC196A0A1B0GTZ2 297 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 FDPSP14324 419 aaKnown RBP9.72□□□□□ -0.85
VPS13B-206ENST00000496144 CCND2P30279 289 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 FAM173BQ6P4H8 233 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 RNF207Q6ZRF8 634 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 RBM43Q6ZSC3 357 aaKnown RBP9.72□□□□□ -0.85
VPS13B-206ENST00000496144 SYMPKQ92797 1274 aaKnown RBP9.72□□□□□ -0.85
VPS13B-206ENST00000496144 STRBPQ96SI9 672 aaKnown RBP9.72□□□□□ -0.85
VPS13B-206ENST00000496144 ARHGAP39Q9C0H5 1083 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 EPB41L4AQ9HCS5 686 aaPredicted RBP9.72□□□□□ -0.85
VPS13B-206ENST00000496144 TACC3Q9Y6A5 838 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 MYCLP12524 364 aaPredicted RBP9.72□□□□□ -0.85
VPS13B-206ENST00000496144 FAM47AQ5JRC9 791 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 MOV10L1Q9BXT6 1211 aaKnown RBP9.72□□□□□ -0.85
VPS13B-206ENST00000496144 CCDC39Q9UFE4 941 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 PPP1R9AQ9ULJ8 1098 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 FAM50BQ9Y247 325 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 A0A1W2PPC1 479 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 MOXD2PA6NHM9 499 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 F5H6K3 240 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 ZBTB22O15209 634 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 SEPT4O43236 478 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 PRDM1O75626 825 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 FPGSQ05932 587 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 KLRC3Q07444 240 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 FBXO11Q86XK2 927 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 PGBD1Q96JS3 809 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 CFAP45Q9UL16 551 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 ABCB11O95342 1321 aa9.72□□□□□ -0.85
VPS13B-206ENST00000496144 SPDYE3A6NKU9 549 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 TRIM29Q14134 588 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 GPAT2Q6NUI2 795 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 PSRC1Q6PGN9 363 aaPredicted RBP9.71□□□□□ -0.85
VPS13B-206ENST00000496144 EP400NLQ6ZTU2 488 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 C7orf31Q8N865 590 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 FERMT2Q96AC1 680 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 CLSTN2Q9H4D0 955 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.71□□□□□ -0.85
VPS13B-206ENST00000496144 H0YGN5 161 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 LIG1P18858 919 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 TMEM67Q5HYA8 995 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 RNF214Q8ND24 703 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 KLF18A0A0U1RQI7 1052 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 POTEFA5A3E0 1075 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 TPRNQ4KMQ1 711 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 HABP4Q5JVS0 413 aaKnown RBP9.71□□□□□ -0.85
VPS13B-206ENST00000496144 GJC2Q5T442 439 aaPredicted RBP9.71□□□□□ -0.85
VPS13B-206ENST00000496144 ZSCAN30Q86W11 494 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 AZI2Q9H6S1 392 aa9.71□□□□□ -0.85
VPS13B-206ENST00000496144 GOLGA8BA8MQT2 603 aa9.71□□□□□ -0.86
VPS13B-206ENST00000496144 MTFR1Q15390 333 aa9.71□□□□□ -0.86
VPS13B-206ENST00000496144 AAK1Q2M2I8 961 aa9.71□□□□□ -0.86
VPS13B-206ENST00000496144 ZNF396Q96N95 335 aaPredicted RBP9.71□□□□□ -0.86
VPS13B-206ENST00000496144 TINF2Q9BSI4 451 aa9.71□□□□□ -0.86
VPS13B-206ENST00000496144 NUP62CLQ9H1M0 184 aa9.71□□□□□ -0.86
VPS13B-206ENST00000496144 ABHD16BQ9H3Z7 469 aa9.71□□□□□ -0.86
VPS13B-206ENST00000496144 DDX19AQ9NUU7 478 aaKnown RBP9.71□□□□□ -0.86
VPS13B-206ENST00000496144 DIS3Q9Y2L1 958 aaKnown RBP9.71□□□□□ -0.86
VPS13B-206ENST00000496144 SLC12A7Q9Y666 1083 aa9.71□□□□□ -0.86
VPS13B-206ENST00000496144 GCOM1H8Y6P7 765 aaPredicted RBP9.71□□□□□ -0.86
VPS13B-206ENST00000496144 POLR2MP0CAP2 368 aa9.71□□□□□ -0.86
VPS13B-206ENST00000496144 TMEM132AQ24JP5 1023 aa9.71□□□□□ -0.86
VPS13B-206ENST00000496144 PPP4R3AQ6IN85 833 aa9.71□□□□□ -0.86
VPS13B-206ENST00000496144 MICALL1Q8N3F8 863 aa9.71□□□□□ -0.86
VPS13B-206ENST00000496144 NOL7Q9UMY1 257 aaKnown RBP9.71□□□□□ -0.86
VPS13B-206ENST00000496144 CYP2D6P10635 497 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 USH1GQ495M9 461 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 TRIM22Q8IYM9 498 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 STXBP2Q15833 593 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 CTR9Q6PD62 1173 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 TSEN34Q9BSV6 310 aaKnown RBP9.7□□□□□ -0.86
VPS13B-206ENST00000496144 PRKAB2O43741 272 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 IBSPP21815 317 aaPredicted RBP9.7□□□□□ -0.86
VPS13B-206ENST00000496144 CYP2C19P33261 490 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 MDM2Q00987 491 aaPredicted RBP9.7□□□□□ -0.86
VPS13B-206ENST00000496144 CTDSPL2Q05D32 466 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 SPOUT1Q5T280 376 aaKnown RBP9.7□□□□□ -0.86
VPS13B-206ENST00000496144 HOMER1Q86YM7 354 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 GIMAP8Q8ND71 665 aaPredicted RBP9.7□□□□□ -0.86
VPS13B-206ENST00000496144 EMILIN3Q9NT22 766 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 CLTBP09497 229 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 ADCYAP1R1P41586 468 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 FOSBP53539 338 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 ACER1Q8TDN7 264 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 TMEM87BQ96K49 555 aa9.7□□□□□ -0.86
VPS13B-206ENST00000496144 TFIP11Q9UBB9 837 aaKnown RBP9.7□□□□□ -0.86
VPS13B-206ENST00000496144 RFX1P22670 979 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 CDAN1Q8IWY9 1227 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 LY9Q9HBG7 655 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms