RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 TNFAIP2Q03169 654 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 TFCP2Q12800 502 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 KIAA1755Q5JYT7 1200 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 TRIM67Q6ZTA4 783 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 TMEM179Q6ZVK1 233 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 ARMCX2Q7L311 632 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 FBXL6Q8N531 539 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 MAGEB6Q8N7X4 407 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 RETREG2Q8NC44 543 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 PABPC5Q96DU9 382 aaKnown RBP11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 DDRGK1Q96HY6 314 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 VCPKMTQ9H867 229 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 TRMT13Q9NUP7 481 aaKnown RBP11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 ZNF214Q9UL59 606 aaPredicted RBP11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 ADAMTS5Q9UNA0 930 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 CACNA1BQ00975 2339 aa11.66□□□□□ -0.54
SMARCAL1-213ENST00000496037 MYH1P12882 1939 aa11.65□□□□□ -0.54
SMARCAL1-213ENST00000496037 DNAJC25-GNG10A0A024R161 153 aa11.65□□□□□ -0.54
SMARCAL1-213ENST00000496037 E9PSI1 815 aa11.65□□□□□ -0.54
SMARCAL1-213ENST00000496037 POLR3DP05423 398 aaPredicted RBP11.65□□□□□ -0.54
SMARCAL1-213ENST00000496037 ICA1Q05084 483 aa11.65□□□□□ -0.54
SMARCAL1-213ENST00000496037 ASCL5Q7RTU5 278 aa11.65□□□□□ -0.54
SMARCAL1-213ENST00000496037 WDR63Q8IWG1 891 aa11.65□□□□□ -0.54
SMARCAL1-213ENST00000496037 MRPL38Q96DV4 380 aaKnown RBP11.65□□□□□ -0.54
SMARCAL1-213ENST00000496037 CCDC97Q96F63 343 aaPredicted RBP11.65□□□□□ -0.54
SMARCAL1-213ENST00000496037 TEX13BQ9BXU2 312 aa11.65□□□□□ -0.54
SMARCAL1-213ENST00000496037 PPP1R9AQ9ULJ8 1098 aa11.65□□□□□ -0.54
SMARCAL1-213ENST00000496037 VPS13AQ96RL7 3174 aa11.65□□□□□ -0.55
SMARCAL1-213ENST00000496037 LINC01553A4QN01 128 aa11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 PRR23AA6NEV1 266 aa11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 PROB1E7EW31 1015 aa11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 WDR5P61964 334 aaKnown RBP11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 SNRNP48Q6IEG0 339 aaKnown RBP11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 GPIHBP1Q8IV16 184 aa11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 ZNF454Q8N9F8 522 aa11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 RAD9AQ99638 391 aa11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 SNRKQ9NRH2 765 aa11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 FBXO28Q9NVF7 368 aa11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 CLDND1Q9NY35 253 aa11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 HDAC5Q9UQL6 1122 aa11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 TMX2Q9Y320 296 aa11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 COL11A1P12107 1806 aaPredicted RBP11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 TECTAO75443 2155 aa11.64□□□□□ -0.55
SMARCAL1-213ENST00000496037 ASTN1O14525 1302 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 PTPRZ1P23471 2315 aaPredicted RBP11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 H0Y858 1186 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 DYNC1LI2O43237 492 aaPredicted RBP11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 KDM4AO75164 1064 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 IQCF3P0C7M6 154 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 CYP7A1P22680 504 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 SLC4A3P48751 1232 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 PLCD1P51178 756 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 BFSP2Q13515 415 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 SMAD2Q15796 467 aaKnown RBP11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 FAM47CQ5HY64 1035 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 TTC39AQ5SRH9 613 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 TMCO2Q7Z6W1 182 aaPredicted RBP11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 CCDC144CPQ8IYA2 1237 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 ANKRD35Q8N283 1001 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 MIGA1Q8NAN2 632 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 BANK1Q8NDB2 785 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 FSD1Q9BTV5 496 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 TLR9Q9NR96 1032 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 GNEQ9Y223 722 aaKnown RBP11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 SIP14410 1827 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 PARP14Q460N5 1801 aa11.63□□□□□ -0.55
SMARCAL1-213ENST00000496037 SCN5AQ14524 2016 aa11.62□□□□□ -0.55
SMARCAL1-213ENST00000496037 KMT2EQ8IZD2 1858 aa11.62□□□□□ -0.55
SMARCAL1-213ENST00000496037 TANC1Q9C0D5 1861 aa11.62□□□□□ -0.55
SMARCAL1-213ENST00000496037 GJB5O95377 273 aa11.62□□□□□ -0.55
SMARCAL1-213ENST00000496037 VCPP55072 806 aaKnown RBP11.62□□□□□ -0.55
SMARCAL1-213ENST00000496037 NBPF20Q3BBV1 942 aa11.62□□□□□ -0.55
SMARCAL1-213ENST00000496037 TCEAL5Q5H9L2 206 aa11.62□□□□□ -0.55
SMARCAL1-213ENST00000496037 CLEC10AQ8IUN9 316 aa11.62□□□□□ -0.55
SMARCAL1-213ENST00000496037 REPS2Q8NFH8 660 aa11.62□□□□□ -0.55
SMARCAL1-213ENST00000496037 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMARCAL1-213ENST00000496037 NOD1Q9Y239 953 aa11.62□□□□□ -0.55
SMARCAL1-213ENST00000496037 SALL2Q9Y467 1007 aaPredicted RBP11.62□□□□□ -0.55
SMARCAL1-213ENST00000496037 CTDP1Q9Y5B0 961 aaPredicted RBP11.62□□□□□ -0.55
SMARCAL1-213ENST00000496037 MED19A0JLT2 244 aaPredicted RBP11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 STXBP3O00186 592 aa11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 ARHGAP33O14559 1287 aa11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 NCK2O43639 380 aa11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 FOSBP53539 338 aa11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 DEFB103AP81534 67 aa11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 CLUL1Q15846 466 aa11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 LRRFIP1Q32MZ4 808 aaKnown RBP11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 SPNS2Q8IVW8 549 aa11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 MRPL50Q8N5N7 158 aaKnown RBP11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 C17orf80Q9BSJ5 609 aa11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 KATNBL1Q9H079 304 aa11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 GZF1Q9H116 711 aaPredicted RBP11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 NSUN3Q9H649 340 aaKnown RBP11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 GOPCQ9HD26 462 aa11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 COL4A6Q14031 1691 aa11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 CACNA1HO95180 2353 aa11.61□□□□□ -0.55
SMARCAL1-213ENST00000496037 DNAH14Q0VDD8 3507 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 PLXNA3P51805 1871 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 MBTPS2O43462 519 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms