RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 HSP90AB4PQ58FF6 505 aa12.28□□□□□ -0.44
C9orf78-207ENST00000495934 IER5LQ5T953 404 aa12.28□□□□□ -0.44
C9orf78-207ENST00000495934 ADHFE1Q8IWW8 467 aa12.28□□□□□ -0.44
C9orf78-207ENST00000495934 RETREG2Q8NC44 543 aa12.28□□□□□ -0.44
C9orf78-207ENST00000495934 CHST13Q8NET6 341 aa12.28□□□□□ -0.44
C9orf78-207ENST00000495934 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.28□□□□□ -0.44
C9orf78-207ENST00000495934 KIF1BPQ96EK5 621 aa12.28□□□□□ -0.44
C9orf78-207ENST00000495934 UPF3BQ9BZI7 483 aaKnown RBP12.28□□□□□ -0.44
C9orf78-207ENST00000495934 RAVER2Q9HCJ3 691 aaKnown RBP12.28□□□□□ -0.44
C9orf78-207ENST00000495934 PLSCR2Q9NRY7 297 aa12.28□□□□□ -0.44
C9orf78-207ENST00000495934 FAM50BQ9Y247 325 aa12.28□□□□□ -0.44
C9orf78-207ENST00000495934 VPS13AQ96RL7 3174 aa12.27□□□□□ -0.44
C9orf78-207ENST00000495934 ASB14A6NK59 587 aa12.27□□□□□ -0.45
C9orf78-207ENST00000495934 SMARCA5O60264 1052 aaPredicted RBP12.27□□□□□ -0.45
C9orf78-207ENST00000495934 IRS1P35568 1242 aa12.27□□□□□ -0.45
C9orf78-207ENST00000495934 CDK8P49336 464 aa12.27□□□□□ -0.45
C9orf78-207ENST00000495934 ERC1Q8IUD2 1116 aa12.27□□□□□ -0.45
C9orf78-207ENST00000495934 PRPF38AQ8NAV1 312 aaKnown RBP12.27□□□□□ -0.45
C9orf78-207ENST00000495934 PRRX2Q99811 253 aa12.27□□□□□ -0.45
C9orf78-207ENST00000495934 CCDC8Q9H0W5 538 aaPredicted RBP12.27□□□□□ -0.45
C9orf78-207ENST00000495934 PDGFCQ9NRA1 345 aa12.27□□□□□ -0.45
C9orf78-207ENST00000495934 HOMER2Q9NSB8 354 aa12.27□□□□□ -0.45
C9orf78-207ENST00000495934 MUTYHQ9UIF7 546 aa12.27□□□□□ -0.45
C9orf78-207ENST00000495934 Q9Y3F1 56 aa12.27□□□□□ -0.45
C9orf78-207ENST00000495934 KMT2EQ8IZD2 1858 aa12.26□□□□□ -0.45
C9orf78-207ENST00000495934 LINC01553A4QN01 128 aa12.26□□□□□ -0.45
C9orf78-207ENST00000495934 DEFB103AP81534 67 aa12.26□□□□□ -0.45
C9orf78-207ENST00000495934 TCF15Q12870 199 aa12.26□□□□□ -0.45
C9orf78-207ENST00000495934 BFSP2Q13515 415 aa12.26□□□□□ -0.45
C9orf78-207ENST00000495934 FAM47CQ5HY64 1035 aa12.26□□□□□ -0.45
C9orf78-207ENST00000495934 EP400NLQ6ZTU2 488 aa12.26□□□□□ -0.45
C9orf78-207ENST00000495934 FBXO16Q8IX29 292 aaPredicted RBP12.26□□□□□ -0.45
C9orf78-207ENST00000495934 FAM133AQ8N9E0 248 aa12.26□□□□□ -0.45
C9orf78-207ENST00000495934 FBXO22Q8NEZ5 403 aa12.26□□□□□ -0.45
C9orf78-207ENST00000495934 RAD9AQ99638 391 aa12.26□□□□□ -0.45
C9orf78-207ENST00000495934 FAM86C1Q9NVL1 165 aa12.26□□□□□ -0.45
C9orf78-207ENST00000495934 POLR3EQ9NVU0 708 aa12.26□□□□□ -0.45
C9orf78-207ENST00000495934 DDX49Q9Y6V7 483 aaKnown RBP12.26□□□□□ -0.45
C9orf78-207ENST00000495934 GREB1LQ9C091 1923 aaPredicted RBP12.26□□□□□ -0.45
C9orf78-207ENST00000495934 MYH4Q9Y623 1939 aa12.26□□□□□ -0.45
C9orf78-207ENST00000495934 CYP2D7A0A087X1C5 515 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 SOWAHBA6NEL2 793 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 GJB5O95377 273 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 CENPBP07199 599 aaPredicted RBP12.25□□□□□ -0.45
C9orf78-207ENST00000495934 MYL3P08590 195 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 PDE6AP16499 860 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 PURAQ00577 322 aaKnown RBP12.25□□□□□ -0.45
C9orf78-207ENST00000495934 HERC4Q5GLZ8 1057 aaPredicted RBP12.25□□□□□ -0.45
C9orf78-207ENST00000495934 TMEM63BQ5T3F8 832 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 SLC9C2Q5TAH2 1124 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 IQSEC1Q6DN90 963 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 TAPT1Q6NXT6 567 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 C16orf86Q6ZW13 317 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 EEPD1Q7L9B9 569 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 AACSQ86V21 672 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 SMC5Q8IY18 1101 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 LCORLQ8N3X6 602 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 KIFC2Q96AC6 838 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 MRPL38Q96DV4 380 aaKnown RBP12.25□□□□□ -0.45
C9orf78-207ENST00000495934 SLC38A10Q9HBR0 1119 aa12.25□□□□□ -0.45
C9orf78-207ENST00000495934 NDUFB10O96000 172 aa12.24□□□□□ -0.45
C9orf78-207ENST00000495934 LRRFIP1Q32MZ4 808 aaKnown RBP12.24□□□□□ -0.45
C9orf78-207ENST00000495934 NBPF20Q3BBV1 942 aa12.24□□□□□ -0.45
C9orf78-207ENST00000495934 TIGD5Q53EQ6 642 aa12.24□□□□□ -0.45
C9orf78-207ENST00000495934 BMP8AQ7Z5Y6 402 aa12.24□□□□□ -0.45
C9orf78-207ENST00000495934 OTUD7AQ8TE49 926 aaPredicted RBP12.24□□□□□ -0.45
C9orf78-207ENST00000495934 PPP1R13LQ8WUF5 828 aa12.24□□□□□ -0.45
C9orf78-207ENST00000495934 PABPC5Q96DU9 382 aaKnown RBP12.24□□□□□ -0.45
C9orf78-207ENST00000495934 LRRCC1Q9C099 1032 aa12.24□□□□□ -0.45
C9orf78-207ENST00000495934 ACAD9Q9H845 621 aa12.24□□□□□ -0.45
C9orf78-207ENST00000495934 A1CFQ9NQ94 594 aaKnown RBP12.24□□□□□ -0.45
C9orf78-207ENST00000495934 CTNNA3Q9UI47 895 aa12.24□□□□□ -0.45
C9orf78-207ENST00000495934 MYO15AQ9UKN7 3530 aa12.24□□□□□ -0.45
C9orf78-207ENST00000495934 WDR87Q6ZQQ6 2873 aa12.24□□□□□ -0.45
C9orf78-207ENST00000495934 LCTP09848 1927 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 ZNF532Q9HCE3 1301 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 USP17L12C9JPN9 530 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 USP17L21D6R901 530 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 F5H6K3 240 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 OAZ1P54368 228 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 KLRC3Q07444 240 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 PTPROQ16827 1216 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 C12orf60Q5U649 245 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 FAM117BQ6P1L5 589 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 NFRKBQ6P4R8 1299 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 KIAA1211Q6ZU35 1233 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 RNF135Q8IUD6 432 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 SUGP1Q8IWZ8 645 aaKnown RBP12.23□□□□□ -0.45
C9orf78-207ENST00000495934 AMOTL1Q8IY63 956 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 CLASRPQ8N2M8 674 aaKnown RBP12.23□□□□□ -0.45
C9orf78-207ENST00000495934 EDAQ92838 391 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 PBXIP1Q96AQ6 731 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 POP1Q99575 1024 aaKnown RBP12.23□□□□□ -0.45
C9orf78-207ENST00000495934 C17orf80Q9BSJ5 609 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 MTG1Q9BT17 334 aaPredicted RBP12.23□□□□□ -0.45
C9orf78-207ENST00000495934 RWDD1Q9H446 243 aaPredicted RBP12.23□□□□□ -0.45
C9orf78-207ENST00000495934 ARMT1Q9H993 441 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 GPHNQ9NQX3 736 aaPredicted RBP12.23□□□□□ -0.45
C9orf78-207ENST00000495934 NOD1Q9Y239 953 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 MICAL3Q7RTP6 2002 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms