RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 NOL8Q76FK4 1167 aaKnown RBP28.25■■■□□ 2.11
HLA-C-209ENST00000495835 PURBQ96QR8 312 aaKnown RBP28.25■■■□□ 2.11
HLA-C-209ENST00000495835 SEZ6LQ9BYH1 1024 aa28.25■■■□□ 2.11
HLA-C-209ENST00000495835 AP5M1Q9H0R1 490 aa28.25■■■□□ 2.11
HLA-C-209ENST00000495835 CPVLQ9H3G5 476 aa28.25■■■□□ 2.11
HLA-C-209ENST00000495835 RBM8AQ9Y5S9 174 aaKnown RBP28.25■■■□□ 2.11
HLA-C-209ENST00000495835 RBM47A0AV96 593 aaKnown RBP28.24■■■□□ 2.11
HLA-C-209ENST00000495835 DCDC2CA8MYV0 355 aa28.24■■■□□ 2.11
HLA-C-209ENST00000495835 KLRF2D3W0D1 207 aa28.24■■■□□ 2.11
HLA-C-209ENST00000495835 CLTBP09497 229 aa28.24■■■□□ 2.11
HLA-C-209ENST00000495835 EDNRBP24530 442 aa28.24■■■□□ 2.11
HLA-C-209ENST00000495835 USH1GQ495M9 461 aa28.24■■■□□ 2.11
HLA-C-209ENST00000495835 TLK2Q86UE8 772 aa28.24■■■□□ 2.11
HLA-C-209ENST00000495835 FBXO11Q86XK2 927 aa28.24■■■□□ 2.11
HLA-C-209ENST00000495835 MRPL11Q9Y3B7 192 aaKnown RBP28.24■■■□□ 2.11
HLA-C-209ENST00000495835 PALM3A6NDB9 673 aaPredicted RBP28.23■■■□□ 2.11
HLA-C-209ENST00000495835 DHX16O60231 1041 aaKnown RBP28.23■■■□□ 2.11
HLA-C-209ENST00000495835 ZEB2O60315 1214 aa28.23■■■□□ 2.11
HLA-C-209ENST00000495835 SMPD1P17405 629 aa28.23■■■□□ 2.11
HLA-C-209ENST00000495835 CDK7P50613 346 aa28.23■■■□□ 2.11
HLA-C-209ENST00000495835 TRAF1Q13077 416 aa28.23■■■□□ 2.11
HLA-C-209ENST00000495835 QRICH1Q2TAL8 776 aa28.23■■■□□ 2.11
HLA-C-209ENST00000495835 DUSP28Q4G0W2 176 aa28.23■■■□□ 2.11
HLA-C-209ENST00000495835 FBXO16Q8IX29 292 aaPredicted RBP28.23■■■□□ 2.11
HLA-C-209ENST00000495835 ESYT1Q9BSJ8 1104 aa28.23■■■□□ 2.11
HLA-C-209ENST00000495835 PRDM5Q9NQX1 630 aaPredicted RBP28.23■■■□□ 2.11
HLA-C-209ENST00000495835 PDGFCQ9NRA1 345 aa28.23■■■□□ 2.11
HLA-C-209ENST00000495835 MAD2L2Q9UI95 211 aa28.23■■■□□ 2.11
HLA-C-209ENST00000495835 A0A0U1RQG5 324 aaPredicted RBP28.22■■■□□ 2.11
HLA-C-209ENST00000495835 KIAA0355O15063 1070 aa28.22■■■□□ 2.11
HLA-C-209ENST00000495835 PDE4DQ08499 809 aa28.22■■■□□ 2.11
HLA-C-209ENST00000495835 WTAPQ15007 396 aa28.22■■■□□ 2.11
HLA-C-209ENST00000495835 EEPD1Q7L9B9 569 aa28.22■■■□□ 2.11
HLA-C-209ENST00000495835 STAG2Q8N3U4 1231 aa28.22■■■□□ 2.11
HLA-C-209ENST00000495835 MTMR8Q96EF0 704 aa28.22■■■□□ 2.11
HLA-C-209ENST00000495835 AMNQ9BXJ7 453 aa28.22■■■□□ 2.11
HLA-C-209ENST00000495835 MAP3K20Q9NYL2 800 aaKnown RBP28.22■■■□□ 2.11
HLA-C-209ENST00000495835 TRIM43BA6NCK2 446 aa28.21■■■□□ 2.11
HLA-C-209ENST00000495835 FSCN1Q16658 493 aaKnown RBP28.21■■■□□ 2.11
HLA-C-209ENST00000495835 STOX1Q6ZVD7 989 aa28.21■■■□□ 2.11
HLA-C-209ENST00000495835 SAMD3Q8N6K7 520 aa28.21■■■□□ 2.11
HLA-C-209ENST00000495835 TRIM43Q96BQ3 446 aaPredicted RBP28.21■■■□□ 2.11
HLA-C-209ENST00000495835 LSG1Q9H089 658 aaKnown RBP28.21■■■□□ 2.11
HLA-C-209ENST00000495835 VAT1LQ9HCJ6 419 aa28.21■■■□□ 2.11
HLA-C-209ENST00000495835 ARVCFO00192 962 aa28.2■■■□□ 2.1
HLA-C-209ENST00000495835 ZBTB5O15062 677 aa28.2■■■□□ 2.1
HLA-C-209ENST00000495835 NKRFO15226 690 aaKnown RBP eCLIP28.2■■■□□ 2.1
HLA-C-209ENST00000495835 DYNC1LI2O43237 492 aaPredicted RBP28.2■■■□□ 2.1
HLA-C-209ENST00000495835 PQBP1O60828 265 aaKnown RBP28.2■■■□□ 2.1
HLA-C-209ENST00000495835 GRM4Q14833 912 aa28.2■■■□□ 2.1
HLA-C-209ENST00000495835 MB21D2Q8IYB1 491 aaPredicted RBP28.2■■■□□ 2.1
HLA-C-209ENST00000495835 IGDCC4Q8TDY8 1250 aa28.2■■■□□ 2.1
HLA-C-209ENST00000495835 VTI1AQ96AJ9 217 aa28.2■■■□□ 2.1
HLA-C-209ENST00000495835 MAP3K14Q99558 947 aa28.2■■■□□ 2.1
HLA-C-209ENST00000495835 WDR11Q9BZH6 1224 aa28.2■■■□□ 2.1
HLA-C-209ENST00000495835 SOX1O00570 391 aaPredicted RBP28.19■■■□□ 2.1
HLA-C-209ENST00000495835 IRX5P78411 483 aaPredicted RBP28.19■■■□□ 2.1
HLA-C-209ENST00000495835 GHRHRQ02643 423 aa28.19■■■□□ 2.1
HLA-C-209ENST00000495835 FAAP100Q0VG06 881 aa28.19■■■□□ 2.1
HLA-C-209ENST00000495835 TROAPQ12815 778 aa28.19■■■□□ 2.1
HLA-C-209ENST00000495835 SH3RF1Q7Z6J0 888 aa28.19■■■□□ 2.1
HLA-C-209ENST00000495835 TMTC2Q8N394 836 aa28.19■■■□□ 2.1
HLA-C-209ENST00000495835 IWS1Q96ST2 819 aa28.19■■■□□ 2.1
HLA-C-209ENST00000495835 RIOX1Q9H6W3 641 aa28.19■■■□□ 2.1
HLA-C-209ENST00000495835 TMEM39AQ9NV64 488 aa28.19■■■□□ 2.1
HLA-C-209ENST00000495835 TAF6LQ9Y6J9 622 aa28.19■■■□□ 2.1
HLA-C-209ENST00000495835 DDX49Q9Y6V7 483 aaKnown RBP28.19■■■□□ 2.1
HLA-C-209ENST00000495835 BEX3Q00994 111 aa28.18■■■□□ 2.1
HLA-C-209ENST00000495835 TMEM67Q5HYA8 995 aa28.18■■■□□ 2.1
HLA-C-209ENST00000495835 CATIPQ7Z7H3 387 aa28.18■■■□□ 2.1
HLA-C-209ENST00000495835 NSUN6Q8TEA1 469 aaKnown RBP28.18■■■□□ 2.1
HLA-C-209ENST00000495835 SCFD2Q8WU76 684 aa28.18■■■□□ 2.1
HLA-C-209ENST00000495835 BADQ92934 168 aa28.18■■■□□ 2.1
HLA-C-209ENST00000495835 RAG1P15918 1043 aa28.17■■■□□ 2.1
HLA-C-209ENST00000495835 NECTIN1Q15223 517 aa28.17■■■□□ 2.1
HLA-C-209ENST00000495835 SLC43A3Q8NBI5 491 aa28.17■■■□□ 2.1
HLA-C-209ENST00000495835 SYTL5Q8TDW5 730 aaPredicted RBP28.17■■■□□ 2.1
HLA-C-209ENST00000495835 TLR3O15455 904 aaKnown RBP28.16■■■□□ 2.1
HLA-C-209ENST00000495835 ANTXR2P58335 489 aa28.16■■■□□ 2.1
HLA-C-209ENST00000495835 CASC1Q6TDU7 716 aa28.16■■■□□ 2.1
HLA-C-209ENST00000495835 LRCH3Q96II8 777 aa28.16■■■□□ 2.1
HLA-C-209ENST00000495835 MCM5P33992 734 aa28.15■■■□□ 2.1
HLA-C-209ENST00000495835 CPT1AP50416 773 aa28.15■■■□□ 2.1
HLA-C-209ENST00000495835 BRDTQ58F21 947 aaPredicted RBP28.15■■■□□ 2.1
HLA-C-209ENST00000495835 TBC1D5Q92609 795 aa28.15■■■□□ 2.1
HLA-C-209ENST00000495835 TMEM87BQ96K49 555 aa28.15■■■□□ 2.1
HLA-C-209ENST00000495835 POLR3EQ9NVU0 708 aa28.15■■■□□ 2.1
HLA-C-209ENST00000495835 LAMA2P24043 3122 aaKnown RBP28.15■■■□□ 2.1
HLA-C-209ENST00000495835 SLC27A2O14975 620 aa28.14■■■□□ 2.1
HLA-C-209ENST00000495835 SMARCA1P28370 1054 aa28.14■■■□□ 2.1
HLA-C-209ENST00000495835 HSD17B4P51659 736 aa28.14■■■□□ 2.1
HLA-C-209ENST00000495835 PPP2R5BQ15173 497 aa28.14■■■□□ 2.1
HLA-C-209ENST00000495835 CXCL17Q6UXB2 119 aa28.14■■■□□ 2.1
HLA-C-209ENST00000495835 CHST3Q7LGC8 479 aa28.14■■■□□ 2.1
HLA-C-209ENST00000495835 TAAR1Q96RJ0 339 aa28.14■■■□□ 2.1
HLA-C-209ENST00000495835 RMDN3Q96TC7 470 aa28.14■■■□□ 2.1
HLA-C-209ENST00000495835 TBX21Q9UL17 535 aa28.14■■■□□ 2.1
HLA-C-209ENST00000495835 PCDHA1Q9Y5I3 950 aa28.14■■■□□ 2.1
HLA-C-209ENST00000495835 DDAH1O94760 285 aa28.13■■■□□ 2.09
HLA-C-209ENST00000495835 TIMP1P01033 207 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms