RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 YBX2Q9Y2T7 364 aaKnown RBP14.23□□□□□ -0.13
SHROOM1-206ENST00000495680 CABYRO75952 493 aa14.22□□□□□ -0.13
SHROOM1-206ENST00000495680 RRP1P56182 461 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-206ENST00000495680 PPP4R3BQ5MIZ7 849 aa14.22□□□□□ -0.13
SHROOM1-206ENST00000495680 OTOP2Q7RTS6 562 aa14.22□□□□□ -0.13
SHROOM1-206ENST00000495680 PPM1EQ8WY54 764 aa14.22□□□□□ -0.13
SHROOM1-206ENST00000495680 NKX2-4Q9H2Z4 354 aa14.22□□□□□ -0.13
SHROOM1-206ENST00000495680 VTA1Q9NP79 307 aa14.22□□□□□ -0.13
SHROOM1-206ENST00000495680 HELLSQ9NRZ9 838 aa14.22□□□□□ -0.13
SHROOM1-206ENST00000495680 TRMT13Q9NUP7 481 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-206ENST00000495680 RBAK-RBAKDNI3L0D1 243 aa14.21□□□□□ -0.13
SHROOM1-206ENST00000495680 FGBP02675 491 aa14.21□□□□□ -0.13
SHROOM1-206ENST00000495680 HSPD1P10809 573 aaKnown RBP14.21□□□□□ -0.13
SHROOM1-206ENST00000495680 PDHBP11177 359 aa14.21□□□□□ -0.13
SHROOM1-206ENST00000495680 TOP1P11387 765 aaKnown RBP14.21□□□□□ -0.13
SHROOM1-206ENST00000495680 CALML3P27482 149 aa14.21□□□□□ -0.13
SHROOM1-206ENST00000495680 RABGGTBP53611 331 aa14.21□□□□□ -0.13
SHROOM1-206ENST00000495680 NMIQ13287 307 aaPredicted RBP14.21□□□□□ -0.13
SHROOM1-206ENST00000495680 DUSP28Q4G0W2 176 aa14.21□□□□□ -0.13
SHROOM1-206ENST00000495680 MCMDC2Q4G0Z9 681 aa14.21□□□□□ -0.13
SHROOM1-206ENST00000495680 TBC1D10CQ8IV04 446 aa14.21□□□□□ -0.13
SHROOM1-206ENST00000495680 SCLYQ96I15 445 aa14.21□□□□□ -0.13
SHROOM1-206ENST00000495680 Q9Y3F1 56 aa14.21□□□□□ -0.13
SHROOM1-206ENST00000495680 SCN5AQ14524 2016 aa14.2□□□□□ -0.14
SHROOM1-206ENST00000495680 PTPDC1A2A3K4 754 aa14.2□□□□□ -0.14
SHROOM1-206ENST00000495680 CYP2C9P11712 490 aa14.2□□□□□ -0.14
SHROOM1-206ENST00000495680 MYOGP15173 224 aa14.2□□□□□ -0.14
SHROOM1-206ENST00000495680 COPS5Q92905 334 aa14.2□□□□□ -0.14
SHROOM1-206ENST00000495680 WDR11Q9BZH6 1224 aa14.2□□□□□ -0.14
SHROOM1-206ENST00000495680 ALDH8A1Q9H2A2 487 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-206ENST00000495680 CPVLQ9H3G5 476 aa14.2□□□□□ -0.14
SHROOM1-206ENST00000495680 TCP11L1Q9NUJ3 509 aa14.2□□□□□ -0.14
SHROOM1-206ENST00000495680 CHD7Q9P2D1 2997 aa14.19□□□□□ -0.14
SHROOM1-206ENST00000495680 MUC3AQ02505 3323 aa14.19□□□□□ -0.14
SHROOM1-206ENST00000495680 RBM47A0AV96 593 aaKnown RBP14.19□□□□□ -0.14
SHROOM1-206ENST00000495680 ZEB2O60315 1214 aa14.19□□□□□ -0.14
SHROOM1-206ENST00000495680 MYL3P08590 195 aa14.19□□□□□ -0.14
SHROOM1-206ENST00000495680 GOLGA8HP0CJ92 632 aa14.19□□□□□ -0.14
SHROOM1-206ENST00000495680 PURAQ00577 322 aaKnown RBP14.19□□□□□ -0.14
SHROOM1-206ENST00000495680 ZNF543Q08ER8 600 aa14.19□□□□□ -0.14
SHROOM1-206ENST00000495680 CCDC85BQ15834 202 aaPredicted RBP14.19□□□□□ -0.14
SHROOM1-206ENST00000495680 ZKSCAN3Q9BRR0 538 aa14.19□□□□□ -0.14
SHROOM1-206ENST00000495680 ADD3Q9UEY8 706 aaKnown RBP14.19□□□□□ -0.14
SHROOM1-206ENST00000495680 NEDD4P46934 1319 aa14.18□□□□□ -0.14
SHROOM1-206ENST00000495680 SCN10AQ9Y5Y9 1956 aa14.18□□□□□ -0.14
SHROOM1-206ENST00000495680 SNHG28P0DPA3 235 aa14.18□□□□□ -0.14
SHROOM1-206ENST00000495680 RPS6P62753 249 aaKnown RBP14.18□□□□□ -0.14
SHROOM1-206ENST00000495680 HDAC1Q13547 482 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-206ENST00000495680 TTLL4Q14679 1199 aa14.18□□□□□ -0.14
SHROOM1-206ENST00000495680 RAB30Q15771 203 aa14.18□□□□□ -0.14
SHROOM1-206ENST00000495680 TJAP1Q5JTD0 557 aa14.18□□□□□ -0.14
SHROOM1-206ENST00000495680 RNF207Q6ZRF8 634 aa14.18□□□□□ -0.14
SHROOM1-206ENST00000495680 OR6J1Q8NGC5 347 aa14.18□□□□□ -0.14
SHROOM1-206ENST00000495680 GAS2L1Q99501 681 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-206ENST00000495680 LNPKQ9C0E8 428 aa14.18□□□□□ -0.14
SHROOM1-206ENST00000495680 MSRAQ9UJ68 235 aa14.18□□□□□ -0.14
SHROOM1-206ENST00000495680 TNKSO95271 1327 aa14.17□□□□□ -0.14
SHROOM1-206ENST00000495680 CCDC171Q6TFL3 1326 aa14.17□□□□□ -0.14
SHROOM1-206ENST00000495680 ARIH2O95376 493 aa14.17□□□□□ -0.14
SHROOM1-206ENST00000495680 IGFBP4P22692 258 aa14.17□□□□□ -0.14
SHROOM1-206ENST00000495680 EDNRBP24530 442 aa14.17□□□□□ -0.14
SHROOM1-206ENST00000495680 AKNAD1Q5T1N1 836 aa14.17□□□□□ -0.14
SHROOM1-206ENST00000495680 TBC1D5Q92609 795 aa14.17□□□□□ -0.14
SHROOM1-206ENST00000495680 UBA5Q9GZZ9 404 aa14.17□□□□□ -0.14
SHROOM1-206ENST00000495680 ZBTB47Q9UFB7 747 aaPredicted RBP14.17□□□□□ -0.14
SHROOM1-206ENST00000495680 ZMYM6O95789 1325 aa14.16□□□□□ -0.14
SHROOM1-206ENST00000495680 TRIM6-TRIM34B2RNG4 842 aa14.16□□□□□ -0.14
SHROOM1-206ENST00000495680 NBPF20Q3BBV1 942 aa14.16□□□□□ -0.14
SHROOM1-206ENST00000495680 USH1GQ495M9 461 aa14.16□□□□□ -0.14
SHROOM1-206ENST00000495680 MFSD6Q6ZSS7 791 aa14.16□□□□□ -0.14
SHROOM1-206ENST00000495680 DEFB128Q7Z7B8 93 aa14.16□□□□□ -0.14
SHROOM1-206ENST00000495680 MTG1Q9BT17 334 aaPredicted RBP14.16□□□□□ -0.14
SHROOM1-206ENST00000495680 SEZ6LQ9BYH1 1024 aa14.16□□□□□ -0.14
SHROOM1-206ENST00000495680 MTIF3Q9H2K0 278 aaKnown RBP14.16□□□□□ -0.14
SHROOM1-206ENST00000495680 SLC28A3Q9HAS3 691 aa14.16□□□□□ -0.14
SHROOM1-206ENST00000495680 POLR3EQ9NVU0 708 aa14.16□□□□□ -0.14
SHROOM1-206ENST00000495680 SLC4A7Q9Y6M7 1214 aa14.16□□□□□ -0.14
SHROOM1-206ENST00000495680 WDR19Q8NEZ3 1342 aa14.15□□□□□ -0.14
SHROOM1-206ENST00000495680 TET1Q8NFU7 2136 aa14.15□□□□□ -0.14
SHROOM1-206ENST00000495680 ZBBXA8MT70 800 aa14.15□□□□□ -0.14
SHROOM1-206ENST00000495680 CPT1AP50416 773 aa14.15□□□□□ -0.14
SHROOM1-206ENST00000495680 PDE4DQ08499 809 aa14.15□□□□□ -0.14
SHROOM1-206ENST00000495680 PPP2R5BQ15173 497 aa14.15□□□□□ -0.14
SHROOM1-206ENST00000495680 FAM47CQ5HY64 1035 aa14.15□□□□□ -0.14
SHROOM1-206ENST00000495680 B4GALNT3Q6L9W6 998 aa14.15□□□□□ -0.14
SHROOM1-206ENST00000495680 SYMPKQ92797 1274 aaKnown RBP14.15□□□□□ -0.14
SHROOM1-206ENST00000495680 RILPL2Q969X0 211 aa14.15□□□□□ -0.14
SHROOM1-206ENST00000495680 TTC14Q96N46 770 aa14.15□□□□□ -0.14
SHROOM1-206ENST00000495680 COL20A1Q9P218 1284 aa14.15□□□□□ -0.14
SHROOM1-206ENST00000495680 LAMA4Q16363 1823 aa14.15□□□□□ -0.14
SHROOM1-206ENST00000495680 TANC1Q9C0D5 1861 aa14.14□□□□□ -0.15
SHROOM1-206ENST00000495680 LOC102724159A0A0B4J2E5 919 aa14.14□□□□□ -0.15
SHROOM1-206ENST00000495680 RFXAPO00287 272 aa14.14□□□□□ -0.15
SHROOM1-206ENST00000495680 ARHGEF15O94989 841 aa14.14□□□□□ -0.15
SHROOM1-206ENST00000495680 ATP2A2P16615 1042 aaKnown RBP14.14□□□□□ -0.15
SHROOM1-206ENST00000495680 SDSP20132 328 aa14.14□□□□□ -0.15
SHROOM1-206ENST00000495680 PWP2Q15269 919 aaKnown RBP14.14□□□□□ -0.15
SHROOM1-206ENST00000495680 PPP2R2DQ66LE6 453 aa14.14□□□□□ -0.15
SHROOM1-206ENST00000495680 RPUSD2Q8IZ73 545 aaKnown RBP14.14□□□□□ -0.15
SHROOM1-206ENST00000495680 SCFD2Q8WU76 684 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms