RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 PAQR3Q6TCH7 311 aa8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 CPNE8Q86YQ8 564 aa8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 TOX2Q96NM4 488 aa8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 MCOLN1Q9GZU1 580 aa8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 TNFRSF12AQ9NP84 129 aa8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 SIRPGQ9P1W8 387 aa8.18□□□□□ -1.1
NCKAP1-208ENST00000495619 DBX1A6NMT0 343 aa8.17□□□□□ -1.1
NCKAP1-208ENST00000495619 MYO1BO43795 1136 aa8.17□□□□□ -1.1
NCKAP1-208ENST00000495619 EFEMP2O95967 443 aa8.17□□□□□ -1.1
NCKAP1-208ENST00000495619 ECI1P42126 302 aa8.17□□□□□ -1.1
NCKAP1-208ENST00000495619 CEBPAP49715 358 aaPredicted RBP8.17□□□□□ -1.1
NCKAP1-208ENST00000495619 ATG14Q6ZNE5 492 aa8.17□□□□□ -1.1
NCKAP1-208ENST00000495619 NPM2Q86SE8 214 aaKnown RBP8.17□□□□□ -1.1
NCKAP1-208ENST00000495619 LRRC47Q8N1G4 583 aaKnown RBP8.17□□□□□ -1.1
NCKAP1-208ENST00000495619 ZNF669Q96BR6 464 aaPredicted RBP8.17□□□□□ -1.1
NCKAP1-208ENST00000495619 GPRC5CQ9NQ84 441 aa8.17□□□□□ -1.1
NCKAP1-208ENST00000495619 NUDT5Q9UKK9 219 aa8.17□□□□□ -1.1
NCKAP1-208ENST00000495619 ETV2O00321 342 aaPredicted RBP8.16□□□□□ -1.1
NCKAP1-208ENST00000495619 MEFVO15553 781 aaPredicted RBP8.16□□□□□ -1.1
NCKAP1-208ENST00000495619 SRGAP3O43295 1099 aa8.16□□□□□ -1.1
NCKAP1-208ENST00000495619 THBDP07204 575 aa8.16□□□□□ -1.1
NCKAP1-208ENST00000495619 MED14OSP0DP75 135 aa8.16□□□□□ -1.1
NCKAP1-208ENST00000495619 SDHBP21912 280 aa8.16□□□□□ -1.1
NCKAP1-208ENST00000495619 MAPKAPK2P49137 400 aa8.16□□□□□ -1.1
NCKAP1-208ENST00000495619 DLG4P78352 724 aa8.16□□□□□ -1.1
NCKAP1-208ENST00000495619 KCNAB2Q13303 367 aa8.16□□□□□ -1.1
NCKAP1-208ENST00000495619 CBX2Q14781 532 aaPredicted RBP8.16□□□□□ -1.1
NCKAP1-208ENST00000495619 ZC3H14Q6PJT7 736 aaKnown RBP8.16□□□□□ -1.1
NCKAP1-208ENST00000495619 KCNK12Q9HB15 430 aa8.16□□□□□ -1.1
NCKAP1-208ENST00000495619 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.16□□□□□ -1.1
NCKAP1-208ENST00000495619 MYOCOSA0A1B0GUC4 107 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 C7orf72A4D263 438 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 SCG5P05408 212 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 MSL3P1P0C860 447 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 C1QTNF9P0C862 333 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 TACR1P25103 407 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 VIPR1P32241 457 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 GTF2A2P52657 109 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 TMC6Q7Z403 805 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 ZSCAN18Q8TBC5 510 aaPredicted RBP8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 KCTD13Q8WZ19 329 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 DIO2Q92813 273 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 LGR4Q9BXB1 951 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 KLHL14Q9P2G3 628 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 RWDD3Q9Y3V2 267 aa8.15□□□□□ -1.1
NCKAP1-208ENST00000495619 PPP2R2AP63151 447 aa8.14□□□□□ -1.11
NCKAP1-208ENST00000495619 RPTNQ6XPR3 784 aa8.14□□□□□ -1.11
NCKAP1-208ENST00000495619 NPLOC4Q8TAT6 608 aa8.14□□□□□ -1.11
NCKAP1-208ENST00000495619 CCDC113Q9H0I3 377 aa8.14□□□□□ -1.11
NCKAP1-208ENST00000495619 GULP1Q9UBP9 304 aa8.14□□□□□ -1.11
NCKAP1-208ENST00000495619 A0A1W2PQU0 124 aa8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 F8W031 263 aaPredicted RBP8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 RFXAPO00287 272 aa8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 PDPK1O15530 556 aa8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 DBHP09172 617 aa8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 GFRA1P56159 465 aa8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 RPL11P62913 178 aaKnown RBP8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 ACBD5Q5T8D3 534 aaPredicted RBP8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 NETO2Q8NC67 525 aa8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 FRS2Q8WU20 508 aa8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 SREK1Q8WXA9 508 aaKnown RBP8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 PEX11GQ96HA9 241 aa8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 IPO9Q96P70 1041 aaKnown RBP8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 AARSD1Q9BTE6 412 aaKnown RBP8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 SMG5Q9UPR3 1016 aaKnown RBP8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 TIMM13Q9Y5L4 95 aaPredicted RBP8.13□□□□□ -1.11
NCKAP1-208ENST00000495619 CCDC85CA6NKD9 419 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 TBX1O43435 398 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 FUCA1P04066 466 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 LTBRP36941 435 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 RBL2Q08999 1139 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 MAP4K2Q12851 820 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 IFRD2Q12894 506 aaPredicted RBP8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 TARBP2Q15633 366 aaKnown RBP8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 KCNA10Q16322 511 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 MTERF2Q49AM1 385 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 CIAPIN1Q6FI81 312 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 DPH6Q7L8W6 267 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 LRP10Q7Z4F1 713 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 PPIL6Q8IXY8 311 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 KRTAP9-2Q9BYQ4 174 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 IRAK3Q9Y616 596 aa8.12□□□□□ -1.11
NCKAP1-208ENST00000495619 TRAV20A0A0B4J274 112 aa8.11□□□□□ -1.11
NCKAP1-208ENST00000495619 ZBTB7AO95365 584 aa8.11□□□□□ -1.11
NCKAP1-208ENST00000495619 GLI4P10075 376 aa8.11□□□□□ -1.11
NCKAP1-208ENST00000495619 PFKLP17858 780 aa8.11□□□□□ -1.11
NCKAP1-208ENST00000495619 RASGRF1Q13972 1273 aa8.11□□□□□ -1.11
NCKAP1-208ENST00000495619 SLC9A5Q14940 896 aa8.11□□□□□ -1.11
NCKAP1-208ENST00000495619 PLEKHN1Q494U1 663 aaPredicted RBP8.11□□□□□ -1.11
NCKAP1-208ENST00000495619 ZNF385BQ569K4 471 aa8.11□□□□□ -1.11
NCKAP1-208ENST00000495619 BTG4Q9NY30 223 aa8.11□□□□□ -1.11
NCKAP1-208ENST00000495619 MARCH2Q9P0N8 246 aa8.11□□□□□ -1.11
NCKAP1-208ENST00000495619 MBD1Q9UIS9 605 aaPredicted RBP8.11□□□□□ -1.11
NCKAP1-208ENST00000495619 CNOT6Q9ULM6 557 aaKnown RBP8.11□□□□□ -1.11
NCKAP1-208ENST00000495619 MSRB2Q9Y3D2 182 aa8.11□□□□□ -1.11
NCKAP1-208ENST00000495619 NPIPB6E9PJ23 425 aa8.1□□□□□ -1.11
NCKAP1-208ENST00000495619 N4BP3O15049 544 aa8.1□□□□□ -1.11
NCKAP1-208ENST00000495619 TMEM145Q8NBT3 493 aa8.1□□□□□ -1.11
NCKAP1-208ENST00000495619 MZB1Q8WU39 189 aa8.1□□□□□ -1.11
NCKAP1-208ENST00000495619 CHAMP1Q96JM3 812 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms