RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 RACK1P63244 317 aaKnown RBP7.14□□□□□ -1.27
GAPVD1-218ENST00000495588 VPS72Q15906 364 aa7.14□□□□□ -1.27
GAPVD1-218ENST00000495588 PLEKHO1Q53GL0 409 aaPredicted RBP7.14□□□□□ -1.27
GAPVD1-218ENST00000495588 CIAPIN1Q6FI81 312 aa7.14□□□□□ -1.27
GAPVD1-218ENST00000495588 NECAB3Q96P71 396 aaPredicted RBP7.14□□□□□ -1.27
GAPVD1-218ENST00000495588 TINF2Q9BSI4 451 aa7.14□□□□□ -1.27
GAPVD1-218ENST00000495588 CEP44Q9C0F1 390 aa7.14□□□□□ -1.27
GAPVD1-218ENST00000495588 NSUN3Q9H649 340 aaKnown RBP7.14□□□□□ -1.27
GAPVD1-218ENST00000495588 GGT7Q9UJ14 662 aa7.14□□□□□ -1.27
GAPVD1-218ENST00000495588 TTF2Q9UNY4 1162 aaKnown RBP7.14□□□□□ -1.27
GAPVD1-218ENST00000495588 GLI3P10071 1580 aa7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 PLEKHG2Q9H7P9 1386 aa7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 FAAP100Q0VG06 881 aa7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 DCTN1Q14203 1278 aa7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 KCNA10Q16322 511 aa7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 AMOTQ4VCS5 1084 aa7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 NAALADL2Q58DX5 795 aa7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 ZNF530Q6P9A1 599 aaPredicted RBP7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 USP48Q86UV5 1035 aa7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 ZNF654Q8IZM8 581 aa7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 NGEFQ8N5V2 710 aa7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 SLC43A3Q8NBI5 491 aa7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 THUMPD2Q9BTF0 503 aaKnown RBP7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 KRTAP17-1Q9BYP8 105 aa7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 KCNQ5Q9NR82 932 aa7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 VIRMAQ69YN4 1812 aaKnown RBP7.13□□□□□ -1.27
GAPVD1-218ENST00000495588 LRRC37A3O60309 1634 aa7.12□□□□□ -1.27
GAPVD1-218ENST00000495588 ATRNO75882 1429 aa7.12□□□□□ -1.27
GAPVD1-218ENST00000495588 MAP3K5Q99683 1374 aa7.12□□□□□ -1.27
GAPVD1-218ENST00000495588 PITPNM2Q9BZ72 1349 aa7.12□□□□□ -1.27
GAPVD1-218ENST00000495588 ENC1O14682 589 aa7.12□□□□□ -1.27
GAPVD1-218ENST00000495588 PWP1Q13610 501 aa7.12□□□□□ -1.27
GAPVD1-218ENST00000495588 ZNF394Q53GI3 561 aa7.12□□□□□ -1.27
GAPVD1-218ENST00000495588 MCM10Q7L590 875 aa7.12□□□□□ -1.27
GAPVD1-218ENST00000495588 FAM214BQ7L5A3 538 aa7.12□□□□□ -1.27
GAPVD1-218ENST00000495588 RNF214Q8ND24 703 aa7.12□□□□□ -1.27
GAPVD1-218ENST00000495588 KCNB2Q92953 911 aa7.12□□□□□ -1.27
GAPVD1-218ENST00000495588 AKAP2Q9Y2D5 859 aa7.12□□□□□ -1.27
GAPVD1-218ENST00000495588 THRAP3Q9Y2W1 955 aaKnown RBP7.12□□□□□ -1.27
GAPVD1-218ENST00000495588 PCDH11XQ9BZA7 1347 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 PCDH11YQ9BZA8 1340 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 TCAF2A6NFQ2 919 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 CYP27B1O15528 508 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 PHKG2P15735 406 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 LMOD3Q0VAK6 560 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 CCDC85BQ15834 202 aaPredicted RBP7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 NKPD1Q17RQ9 610 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 C1orf141Q5JVX7 400 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 WDR63Q8IWG1 891 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 ZCRB1Q8TBF4 217 aaKnown RBP7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 CCSER2Q9H7U1 834 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 CARS2Q9HA77 564 aaKnown RBP7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 COPRSQ9NQ92 184 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 PRDM10Q9NQV6 1147 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 TRPC5Q9UL62 973 aaPredicted RBP7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 ADAMTS7Q9UKP4 1686 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 THSD7AQ9UPZ6 1657 aa7.11□□□□□ -1.27
GAPVD1-218ENST00000495588 KDM6AO15550 1401 aaPredicted RBP7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 TNS2Q63HR2 1409 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 SCN11AQ9UI33 1791 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 HTATSF1O43719 755 aaKnown RBP7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 IGSF3O75054 1194 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 GDNFP39905 211 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 GJA8P48165 433 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 RPS26P62854 115 aaKnown RBP7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 ERVK-24P63145 666 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 PPP2R3AQ06190 1150 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 SLFN5Q08AF3 891 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 MPRIPQ6WCQ1 1025 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 ATG14Q6ZNE5 492 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 IFNL2Q8IZJ0 200 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 IL17REQ8NFR9 667 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 RTF1Q92541 710 aaKnown RBP7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 RHOVQ96L33 236 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 TMEM74Q96NL1 305 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 GMLQ99445 158 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 EPB41L4BQ9H329 900 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 ACBD3Q9H3P7 528 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 CD320Q9NPF0 282 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 DCP1AQ9NPI6 582 aaPredicted RBP7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 KBTBD4Q9NVX7 518 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 PCDHGB7Q9Y5F8 929 aa7.1□□□□□ -1.27
GAPVD1-218ENST00000495588 CEMIPQ8WUJ3 1361 aa7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 EXOC5O00471 708 aa7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 RNMTO43148 476 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 FBXO24O75426 580 aa7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 CELA3AP09093 270 aa7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 DDB1Q16531 1140 aa7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 ZC3H12AQ5D1E8 599 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 ZNF772Q68DY9 489 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 TPTE2Q6XPS3 522 aa7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 PHC3Q8NDX5 983 aa7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 SREK1Q8WXA9 508 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 CCDC120Q96HB5 630 aa7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 TMEM39AQ9NV64 488 aa7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 RGS17Q9UGC6 210 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 TOGARAM1Q9Y4F4 1720 aa7.09□□□□□ -1.27
GAPVD1-218ENST00000495588 SIPA1L3O60292 1781 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-218ENST00000495588 IL16Q14005 1332 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms