RNA–Protein interactions for RNA: ENST00000494867.1

USP34-221, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 795 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-221ENST00000494867 PTPDC1A2A3K4 754 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 NFIBO00712 420 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 COBLO75128 1261 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 MYCP01106 439 aaPredicted RBP13.29□□□□□ -0.28
USP34-221ENST00000494867 HMGCRP04035 888 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 NEK4P51957 841 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 AK2P54819 239 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 UBXN2AP68543 259 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 STK3Q13188 491 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 ANKRD1Q15327 319 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 CCL14Q16627 93 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 IER5LQ5T953 404 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 TRMT44Q8IYL2 757 aaKnown RBP13.29□□□□□ -0.28
USP34-221ENST00000494867 SRBD1Q8N5C6 995 aaKnown RBP13.29□□□□□ -0.28
USP34-221ENST00000494867 PXYLP1Q8TE99 480 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 TRIB2Q92519 343 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 MTMR8Q96EF0 704 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 IL17RAQ96F46 866 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 AMNQ9BXJ7 453 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 OCEL1Q9H607 264 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 A1CFQ9NQ94 594 aaKnown RBP13.29□□□□□ -0.28
USP34-221ENST00000494867 PFASO15067 1338 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 NID2Q14112 1375 aa13.29□□□□□ -0.28
USP34-221ENST00000494867 PNMA6FA0A0J9YX94 578 aa13.28□□□□□ -0.28
USP34-221ENST00000494867 INHAP05111 366 aa13.28□□□□□ -0.28
USP34-221ENST00000494867 CDC27P30260 824 aa13.28□□□□□ -0.28
USP34-221ENST00000494867 RBM25P49756 843 aaKnown RBP13.28□□□□□ -0.28
USP34-221ENST00000494867 ATN1P54259 1190 aaPredicted RBP13.28□□□□□ -0.28
USP34-221ENST00000494867 CCT2P78371 535 aaKnown RBP13.28□□□□□ -0.28
USP34-221ENST00000494867 BACH2Q9BYV9 841 aa13.28□□□□□ -0.28
USP34-221ENST00000494867 NCOA5Q9HCD5 579 aaKnown RBP13.28□□□□□ -0.28
USP34-221ENST00000494867 MRPL11Q9Y3B7 192 aaKnown RBP13.28□□□□□ -0.28
USP34-221ENST00000494867 PCDHA1Q9Y5I3 950 aa13.28□□□□□ -0.28
USP34-221ENST00000494867 hCG_1642624A0A1W2PR95 340 aa13.27□□□□□ -0.29
USP34-221ENST00000494867 POTEB2H3BUK9 544 aa13.27□□□□□ -0.29
USP34-221ENST00000494867 PPP1R11O60927 126 aaPredicted RBP13.27□□□□□ -0.29
USP34-221ENST00000494867 HOXC6P09630 235 aa13.27□□□□□ -0.29
USP34-221ENST00000494867 XRCC5P13010 732 aaKnown RBP13.27□□□□□ -0.29
USP34-221ENST00000494867 CALML3P27482 149 aa13.27□□□□□ -0.29
USP34-221ENST00000494867 PDIA3P30101 505 aaKnown RBP13.27□□□□□ -0.29
USP34-221ENST00000494867 TRAF1Q13077 416 aa13.27□□□□□ -0.29
USP34-221ENST00000494867 DSG2Q14126 1118 aa13.27□□□□□ -0.29
USP34-221ENST00000494867 PPP2R5BQ15173 497 aa13.27□□□□□ -0.29
USP34-221ENST00000494867 MFSD14CQ5VZR4 134 aa13.27□□□□□ -0.29
USP34-221ENST00000494867 SLC30A10Q6XR72 485 aa13.27□□□□□ -0.29
USP34-221ENST00000494867 PDCD7Q8N8D1 485 aaKnown RBP13.27□□□□□ -0.29
USP34-221ENST00000494867 ARMC5Q96C12 935 aa13.27□□□□□ -0.29
USP34-221ENST00000494867 TBC1D32Q96NH3 1257 aa13.27□□□□□ -0.29
USP34-221ENST00000494867 FLRT1Q9NZU1 646 aa13.27□□□□□ -0.29
USP34-221ENST00000494867 ZNFX1Q9P2E3 1918 aaKnown RBP13.27□□□□□ -0.29
USP34-221ENST00000494867 CCDC85CA6NKD9 419 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 DPYSL4O14531 572 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 CPLX1O14810 134 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 LCTP09848 1927 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 SMARCA1P28370 1054 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 ADD1P35611 737 aaKnown RBP13.26□□□□□ -0.29
USP34-221ENST00000494867 TRIM32Q13049 653 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 ZNF792Q3KQV3 632 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 RNF207Q6ZRF8 634 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 HEATR3Q7Z4Q2 680 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 CLEC4DQ8WXI8 215 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 ZNF274Q96GC6 653 aaPredicted RBP13.26□□□□□ -0.29
USP34-221ENST00000494867 MAML3Q96JK9 1138 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 ZNF333Q96JL9 665 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 ALDH8A1Q9H2A2 487 aaPredicted RBP13.26□□□□□ -0.29
USP34-221ENST00000494867 SLKQ9H2G2 1235 aaPredicted RBP13.26□□□□□ -0.29
USP34-221ENST00000494867 SLC24A3Q9HC58 644 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 FAM217BQ9NTX9 383 aaPredicted RBP13.26□□□□□ -0.29
USP34-221ENST00000494867 CYP39A1Q9NYL5 469 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 TPCN1Q9ULQ1 816 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 BOLA1Q9Y3E2 137 aa13.26□□□□□ -0.29
USP34-221ENST00000494867 SMCHD1A6NHR9 2005 aa13.25□□□□□ -0.29
USP34-221ENST00000494867 DNAJC25-GNG10A0A024R161 153 aa13.25□□□□□ -0.29
USP34-221ENST00000494867 ATMINO43313 823 aaPredicted RBP13.25□□□□□ -0.29
USP34-221ENST00000494867 PPFIA3O75145 1194 aa13.25□□□□□ -0.29
USP34-221ENST00000494867 CFBP00751 764 aa13.25□□□□□ -0.29
USP34-221ENST00000494867 CYP2C19P33261 490 aa13.25□□□□□ -0.29
USP34-221ENST00000494867 EVCP57679 992 aa13.25□□□□□ -0.29
USP34-221ENST00000494867 FOXK1P85037 733 aa13.25□□□□□ -0.29
USP34-221ENST00000494867 AKAP17AQ02040 695 aaKnown RBP13.25□□□□□ -0.29
USP34-221ENST00000494867 CNTN2Q02246 1040 aa13.25□□□□□ -0.29
USP34-221ENST00000494867 BAATQ14032 418 aaPredicted RBP13.25□□□□□ -0.29
USP34-221ENST00000494867 RABEP1Q15276 862 aa13.25□□□□□ -0.29
USP34-221ENST00000494867 OLFML2BQ68BL8 750 aa13.25□□□□□ -0.29
USP34-221ENST00000494867 CPLX2Q6PUV4 134 aaKnown RBP13.25□□□□□ -0.29
USP34-221ENST00000494867 MCF2L2Q86YR7 1114 aa13.25□□□□□ -0.29
USP34-221ENST00000494867 GPKOWQ92917 476 aaPredicted RBP eCLIP13.25□□□□□ -0.29
USP34-221ENST00000494867 KIF2CQ99661 725 aa13.25□□□□□ -0.29
USP34-221ENST00000494867 LRRC37A2A6NM11 1700 aa13.25□□□□□ -0.29
USP34-221ENST00000494867 BAZ2BQ9UIF8 2168 aaKnown RBP13.24□□□□□ -0.29
USP34-221ENST00000494867 ZMYND10O75800 440 aa13.24□□□□□ -0.29
USP34-221ENST00000494867 CCL5P13501 91 aa13.24□□□□□ -0.29
USP34-221ENST00000494867 RPS6P62753 249 aaKnown RBP13.24□□□□□ -0.29
USP34-221ENST00000494867 IRX5P78411 483 aaPredicted RBP13.24□□□□□ -0.29
USP34-221ENST00000494867 FUT2Q10981 343 aa13.24□□□□□ -0.29
USP34-221ENST00000494867 MTFR1Q15390 333 aa13.24□□□□□ -0.29
USP34-221ENST00000494867 ASTLQ6HA08 431 aaPredicted RBP13.24□□□□□ -0.29
USP34-221ENST00000494867 PHKBQ93100 1093 aa13.24□□□□□ -0.29
USP34-221ENST00000494867 SLC26A6Q9BXS9 759 aa13.24□□□□□ -0.29
USP34-221ENST00000494867 DIS3Q9Y2L1 958 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms