RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 USP17L20D6RJB6 530 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 PIK3CDO00329 1044 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 MEIS2O14770 477 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 USP11P51784 963 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 USP17L24Q0WX57 530 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 PNOCQ13519 176 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 IQCB1Q15051 598 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 USH1GQ495M9 461 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 NOL9Q5SY16 702 aaKnown RBP13.01□□□□□ -0.33
HDLBP-245ENST00000494862 PRAMEF18Q5VWM3 479 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 DPY19L2Q6NUT2 758 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 USP17L6PQ6QN14 398 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 C11orf57Q6ZUT1 292 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-245ENST00000494862 SH3RF1Q7Z6J0 888 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 PDILTQ8N807 584 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 IQUBQ8NA54 791 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 KLRG1Q96E93 195 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 L3MBTL3Q96JM7 780 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-245ENST00000494862 MTMR9Q96QG7 549 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 MRPL11Q9Y3B7 192 aaKnown RBP13.01□□□□□ -0.33
HDLBP-245ENST00000494862 ABCB11O95342 1321 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 ZC3H4Q9UPT8 1303 aaKnown RBP13□□□□□ -0.33
HDLBP-245ENST00000494862 CYP3A7-CYP3A51PA0A087WV96 503 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 SMC2O95347 1197 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 TDP2O95551 362 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 PTPRAP18433 802 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 CYP3A7P24462 503 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 SARSP49591 514 aaKnown RBP13□□□□□ -0.33
HDLBP-245ENST00000494862 E2F4Q16254 413 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 CALCRLQ16602 461 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 NT5DC1Q5TFE4 455 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 CCDC174Q6PII3 467 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 MOXD1Q6UVY6 613 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 LUZP1Q86V48 1076 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 ZNF280CQ8ND82 737 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 DCPSQ96C86 337 aaKnown RBP13□□□□□ -0.33
HDLBP-245ENST00000494862 PAGE5Q96GU1 130 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 MBOAT7Q96N66 472 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 SLF1Q9BQI6 1058 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 BPIFA3Q9BQP9 254 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 FBXO28Q9NVF7 368 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 PCDHA5Q9Y5H7 936 aa13□□□□□ -0.33
HDLBP-245ENST00000494862 SSC5DA1L4H1 1573 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 A0A087WWV3 80 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 SPDYE3A6NKU9 549 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 BIN1O00499 593 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 OPLAHO14841 1288 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 FOXN1O15353 648 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 SLC37A4O43826 429 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 FDX1P10109 184 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 UBA7P41226 1012 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 BACE1P56817 501 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 SPP2Q13103 211 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 MTMR2Q13614 643 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 USP50Q70EL3 339 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-245ENST00000494862 SULF1Q8IWU6 871 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 TRIML1Q8N9V2 468 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 PRPF38AQ8NAV1 312 aaKnown RBP12.99□□□□□ -0.33
HDLBP-245ENST00000494862 SMARCE1Q969G3 411 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 ZKSCAN4Q969J2 545 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-245ENST00000494862 C12orf42Q96LP6 360 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 CCDC39Q9UFE4 941 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 DDX25Q9UHL0 483 aaKnown RBP12.99□□□□□ -0.33
HDLBP-245ENST00000494862 MAN1B1Q9UKM7 699 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 PNMA2Q9UL42 364 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 ATAD5Q96QE3 1844 aa12.99□□□□□ -0.33
HDLBP-245ENST00000494862 C19orf81C9J6K1 198 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 GOLGA6L19H0YKK7 550 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 GCOM1H8Y6P7 765 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-245ENST00000494862 GRIN3BO60391 1043 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 USP2O75604 605 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-245ENST00000494862 POLR2MP0CAP2 368 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 TAL1P17542 331 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-245ENST00000494862 VCAM1P19320 739 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 SREBF1P36956 1147 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 MAP3K9P80192 1104 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 GPR162Q16538 588 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 TMEM266Q2M3C6 531 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 DPCR1Q3MIW9 517 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 RRAGBQ5VZM2 374 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 PDXDC2PQ6P474 469 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 CABP7Q86V35 215 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 LDHDQ86WU2 507 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 IGSF22Q8N9C0 903 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.98□□□□□ -0.337e-10■□□□□ 8.3
HDLBP-245ENST00000494862 SPATA20Q8TB22 786 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 ZC3H15Q8WU90 426 aaKnown RBP12.98□□□□□ -0.33
HDLBP-245ENST00000494862 CRYGNQ8WXF5 182 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 P2RX7Q99572 595 aaKnown RBP12.98□□□□□ -0.33
HDLBP-245ENST00000494862 RAB34Q9BZG1 259 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 RPAP3Q9H6T3 665 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-245ENST00000494862 DISC1Q9NRI5 854 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 PPP1R9AQ9ULJ8 1098 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 ZHX2Q9Y6X8 837 aa12.98□□□□□ -0.33
HDLBP-245ENST00000494862 DOCK1Q14185 1865 aa12.97□□□□□ -0.33
HDLBP-245ENST00000494862 SMTNL1A8MU46 457 aa12.97□□□□□ -0.33
HDLBP-245ENST00000494862 BECN2A8MW95 431 aa12.97□□□□□ -0.33
HDLBP-245ENST00000494862 GTPBP6O43824 516 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-245ENST00000494862 ADCY5O95622 1261 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms