RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 IQSEC1Q6DN90 963 aa20.47■□□□□ 0.87
HDAC4-211ENST00000494800 EEPD1Q7L9B9 569 aa20.47■□□□□ 0.87
HDAC4-211ENST00000494800 PCSK9Q8NBP7 692 aaKnown RBP20.47■□□□□ 0.87
HDAC4-211ENST00000494800 MTMR8Q96EF0 704 aa20.47■□□□□ 0.87
HDAC4-211ENST00000494800 PURBQ96QR8 312 aaKnown RBP20.47■□□□□ 0.87
HDAC4-211ENST00000494800 PCDHA1Q9Y5I3 950 aa20.47■□□□□ 0.87
HDAC4-211ENST00000494800 ASTN1O14525 1302 aa20.47■□□□□ 0.87
HDAC4-211ENST00000494800 PNMA6FA0A0J9YX94 578 aa20.46■□□□□ 0.87
HDAC4-211ENST00000494800 SLC39A5Q6ZMH5 540 aa20.46■□□□□ 0.87
HDAC4-211ENST00000494800 DHX32Q7L7V1 743 aaKnown RBP20.46■□□□□ 0.87
HDAC4-211ENST00000494800 FBXO16Q8IX29 292 aaPredicted RBP20.46■□□□□ 0.87
HDAC4-211ENST00000494800 FERMT2Q96AC1 680 aa20.46■□□□□ 0.87
HDAC4-211ENST00000494800 PIGSQ96S52 555 aa20.46■□□□□ 0.87
HDAC4-211ENST00000494800 AP5M1Q9H0R1 490 aa20.46■□□□□ 0.87
HDAC4-211ENST00000494800 MAP3K20Q9NYL2 800 aaKnown RBP20.46■□□□□ 0.87
HDAC4-211ENST00000494800 PRKAG2Q9UGJ0 569 aa20.46■□□□□ 0.87
HDAC4-211ENST00000494800 CFBP00751 764 aa20.45■□□□□ 0.86
HDAC4-211ENST00000494800 CST5P28325 142 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-211ENST00000494800 SMARCA1P28370 1054 aa20.45■□□□□ 0.86
HDAC4-211ENST00000494800 GJA9P57773 515 aa20.45■□□□□ 0.86
HDAC4-211ENST00000494800 FGD1P98174 961 aa20.45■□□□□ 0.86
HDAC4-211ENST00000494800 CHRDL2Q6WN34 429 aa20.45■□□□□ 0.86
HDAC4-211ENST00000494800 SAMD3Q8N6K7 520 aa20.45■□□□□ 0.86
HDAC4-211ENST00000494800 NSUN6Q8TEA1 469 aaKnown RBP20.45■□□□□ 0.86
HDAC4-211ENST00000494800 RRP36Q96EU6 259 aaKnown RBP20.45■□□□□ 0.86
HDAC4-211ENST00000494800 MYL10Q9BUA6 226 aa20.45■□□□□ 0.86
HDAC4-211ENST00000494800 GPHNQ9NQX3 736 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-211ENST00000494800 SEC63Q9UGP8 760 aaKnown RBP20.45■□□□□ 0.86
HDAC4-211ENST00000494800 ZMYND8Q9ULU4 1186 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-211ENST00000494800 ATP11BQ9Y2G3 1177 aa20.45■□□□□ 0.86
HDAC4-211ENST00000494800 A0A1W2PQ45 241 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-211ENST00000494800 A0A1W2PQY0 241 aa20.44■□□□□ 0.86
HDAC4-211ENST00000494800 ACLYP53396 1101 aa20.44■□□□□ 0.86
HDAC4-211ENST00000494800 RTP1P59025 263 aa20.44■□□□□ 0.86
HDAC4-211ENST00000494800 KCNA10Q16322 511 aa20.44■□□□□ 0.86
HDAC4-211ENST00000494800 GNASQ5JWF2 1037 aa20.44■□□□□ 0.86
HDAC4-211ENST00000494800 TLK2Q86UE8 772 aa20.44■□□□□ 0.86
HDAC4-211ENST00000494800 SGMS1Q86VZ5 419 aa20.44■□□□□ 0.86
HDAC4-211ENST00000494800 KLHDC9Q8NEP7 349 aa20.44■□□□□ 0.86
HDAC4-211ENST00000494800 SYTL5Q8TDW5 730 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-211ENST00000494800 SPZ1Q9BXG8 430 aa20.44■□□□□ 0.86
HDAC4-211ENST00000494800 LRRC2Q9BYS8 371 aa20.44■□□□□ 0.86
HDAC4-211ENST00000494800 UPF3AQ9H1J1 476 aaKnown RBP20.44■□□□□ 0.86
HDAC4-211ENST00000494800 COLQQ9Y215 455 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-211ENST00000494800 Q9Y3F1 56 aa20.44■□□□□ 0.86
HDAC4-211ENST00000494800 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.43■□□□□ 0.86
HDAC4-211ENST00000494800 EPB41L2O43491 1005 aaKnown RBP20.43■□□□□ 0.86
HDAC4-211ENST00000494800 ZEB2O60315 1214 aa20.43■□□□□ 0.86
HDAC4-211ENST00000494800 HSPA4P34932 840 aa20.43■□□□□ 0.86
HDAC4-211ENST00000494800 C1orf53Q5VUE5 145 aa20.43■□□□□ 0.86
HDAC4-211ENST00000494800 ARHGEF16Q5VV41 709 aa20.43■□□□□ 0.86
HDAC4-211ENST00000494800 TAPT1Q6NXT6 567 aa20.43■□□□□ 0.86
HDAC4-211ENST00000494800 RASEFQ8IZ41 740 aa20.43■□□□□ 0.86
HDAC4-211ENST00000494800 GLT1D1Q96MS3 346 aa20.43■□□□□ 0.86
HDAC4-211ENST00000494800 IWS1Q96ST2 819 aa20.43■□□□□ 0.86
HDAC4-211ENST00000494800 RMDN3Q96TC7 470 aa20.43■□□□□ 0.86
HDAC4-211ENST00000494800 STARD7Q9NQZ5 370 aa20.43■□□□□ 0.86
HDAC4-211ENST00000494800 ADCY6O43306 1168 aa20.42■□□□□ 0.86
HDAC4-211ENST00000494800 CYTH3O43739 400 aa20.42■□□□□ 0.86
HDAC4-211ENST00000494800 SMPD1P17405 629 aa20.42■□□□□ 0.86
HDAC4-211ENST00000494800 SYN1P17600 705 aa20.42■□□□□ 0.86
HDAC4-211ENST00000494800 EDNRBP24530 442 aa20.42■□□□□ 0.86
HDAC4-211ENST00000494800 SNX17Q15036 470 aa20.42■□□□□ 0.86
HDAC4-211ENST00000494800 MICU3Q86XE3 530 aa20.42■□□□□ 0.86
HDAC4-211ENST00000494800 SCFD2Q8WU76 684 aa20.42■□□□□ 0.86
HDAC4-211ENST00000494800 WDR11Q9BZH6 1224 aa20.42■□□□□ 0.86
HDAC4-211ENST00000494800 PDGFCQ9NRA1 345 aa20.42■□□□□ 0.86
HDAC4-211ENST00000494800 GNEQ9Y223 722 aaKnown RBP20.42■□□□□ 0.86
HDAC4-211ENST00000494800 DDX49Q9Y6V7 483 aaKnown RBP20.42■□□□□ 0.86
HDAC4-211ENST00000494800 GCOM1H8Y6P7 765 aaPredicted RBP20.41■□□□□ 0.86
HDAC4-211ENST00000494800 NKRFO15226 690 aaKnown RBP eCLIP20.41■□□□□ 0.86
HDAC4-211ENST00000494800 DYNC1LI2O43237 492 aaPredicted RBP20.41■□□□□ 0.86
HDAC4-211ENST00000494800 PPP1R11O60927 126 aaPredicted RBP20.41■□□□□ 0.86
HDAC4-211ENST00000494800 ASGR1P07306 291 aa20.41■□□□□ 0.86
HDAC4-211ENST00000494800 POLR2MP0CAP2 368 aa20.41■□□□□ 0.86
HDAC4-211ENST00000494800 PSMA5P28066 241 aa20.41■□□□□ 0.86
HDAC4-211ENST00000494800 HSD17B4P51659 736 aa20.41■□□□□ 0.86
HDAC4-211ENST00000494800 EXOSC10Q01780 885 aaKnown RBP20.41■□□□□ 0.86
HDAC4-211ENST00000494800 PPP2R5BQ15173 497 aa20.41■□□□□ 0.86
HDAC4-211ENST00000494800 STXBP2Q15833 593 aa20.41■□□□□ 0.86
HDAC4-211ENST00000494800 ADCK5Q3MIX3 580 aa20.41■□□□□ 0.86
HDAC4-211ENST00000494800 DUSP28Q4G0W2 176 aa20.41■□□□□ 0.86
HDAC4-211ENST00000494800 HABP4Q5JVS0 413 aaKnown RBP20.41■□□□□ 0.86
HDAC4-211ENST00000494800 FANCBQ8NB91 859 aa20.41■□□□□ 0.86
HDAC4-211ENST00000494800 PIBF1Q8WXW3 757 aa20.41■□□□□ 0.86
HDAC4-211ENST00000494800 TBC1D5Q92609 795 aa20.41■□□□□ 0.86
HDAC4-211ENST00000494800 VTI1AQ96AJ9 217 aa20.41■□□□□ 0.86
HDAC4-211ENST00000494800 TAAR1Q96RJ0 339 aa20.41■□□□□ 0.86
HDAC4-211ENST00000494800 RBM28Q9NW13 759 aaKnown RBP20.41■□□□□ 0.86
HDAC4-211ENST00000494800 ELP1O95163 1332 aa20.4■□□□□ 0.86
HDAC4-211ENST00000494800 RXRAP19793 462 aa20.4■□□□□ 0.86
HDAC4-211ENST00000494800 NKX3-2P78367 333 aa20.4■□□□□ 0.86
HDAC4-211ENST00000494800 GHRHRQ02643 423 aa20.4■□□□□ 0.86
HDAC4-211ENST00000494800 FSCN1Q16658 493 aaKnown RBP20.4■□□□□ 0.86
HDAC4-211ENST00000494800 TRIM60Q495X7 471 aa20.4■□□□□ 0.86
HDAC4-211ENST00000494800 BRDTQ58F21 947 aaPredicted RBP20.4■□□□□ 0.86
HDAC4-211ENST00000494800 CCSAPQ6IQ19 270 aaPredicted RBP20.4■□□□□ 0.86
HDAC4-211ENST00000494800 BLOC1S2Q6QNY1 142 aa20.4■□□□□ 0.86
HDAC4-211ENST00000494800 KCNB2Q92953 911 aa20.4■□□□□ 0.86
HDAC4-211ENST00000494800 JAKMIP1Q96N16 626 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms