RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 LRRN4CLQ8ND94 238 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 CYP2W1Q8TAV3 490 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 NELFBQ8WX92 580 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 PNMA5Q96PV4 448 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 BCAS3Q9H6U6 928 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 MYH7BA7E2Y1 1941 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 IGSF3O75054 1194 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 STAT3P40763 770 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 GRB10Q13322 594 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 CDC37Q16543 378 aaPredicted RBP11.72□□□□□ -0.53
SAMM50-206ENST00000494795 RBM26Q5T8P6 1007 aaKnown RBP11.72□□□□□ -0.53
SAMM50-206ENST00000494795 GPIHBP1Q8IV16 184 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 TC2NQ8N9U0 490 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 DESI2Q9BSY9 194 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 TAB2Q9NYJ8 693 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.72□□□□□ -0.53
SAMM50-206ENST00000494795 PCDHA1Q9Y5I3 950 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 V9GYY5 206 aaPredicted RBP11.72□□□□□ -0.53
SAMM50-206ENST00000494795 SPDYE2BA6NHP3 402 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 SPDYE6P0CI01 402 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 CLK2P49760 499 aaKnown RBP11.72□□□□□ -0.53
SAMM50-206ENST00000494795 MCM6Q14566 821 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 SPATA1Q5VX52 437 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 FAM177A1Q8N128 213 aaPredicted RBP11.72□□□□□ -0.53
SAMM50-206ENST00000494795 TRIML1Q8N9V2 468 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 MYRIPQ8NFW9 859 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 EHD4Q9H223 541 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 PSTPIP2Q9H939 334 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 BLOC1S4Q9NUP1 217 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 KBTBD4Q9NVX7 518 aa11.72□□□□□ -0.53
SAMM50-206ENST00000494795 CENPFP49454 3210 aa11.71□□□□□ -0.53
SAMM50-206ENST00000494795 OPLAHO14841 1288 aa11.71□□□□□ -0.53
SAMM50-206ENST00000494795 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
SAMM50-206ENST00000494795 IKQ13123 557 aaPredicted RBP11.71□□□□□ -0.53
SAMM50-206ENST00000494795 CALCRLQ16602 461 aa11.71□□□□□ -0.53
SAMM50-206ENST00000494795 CDKAL1Q5VV42 579 aa11.71□□□□□ -0.53
SAMM50-206ENST00000494795 TOGARAM2Q6ZUX3 1019 aa11.71□□□□□ -0.53
SAMM50-206ENST00000494795 PPP1R13BQ96KQ4 1090 aa11.71□□□□□ -0.53
SAMM50-206ENST00000494795 CNTNAP1P78357 1384 aa11.71□□□□□ -0.53
SAMM50-206ENST00000494795 RAD51AP2Q09MP3 1159 aa11.71□□□□□ -0.53
SAMM50-206ENST00000494795 TBX2Q13207 712 aaPredicted RBP11.71□□□□□ -0.53
SAMM50-206ENST00000494795 RSBN1LQ6PCB5 846 aaPredicted RBP11.71□□□□□ -0.53
SAMM50-206ENST00000494795 NYAP1Q6ZVC0 841 aa11.71□□□□□ -0.53
SAMM50-206ENST00000494795 IGSF22Q8N9C0 903 aa11.71□□□□□ -0.53
SAMM50-206ENST00000494795 MTMR8Q96EF0 704 aa11.71□□□□□ -0.53
SAMM50-206ENST00000494795 GMLQ99445 158 aa11.71□□□□□ -0.53
SAMM50-206ENST00000494795 FGFBP2Q9BYJ0 223 aa11.71□□□□□ -0.53
SAMM50-206ENST00000494795 ZNF70Q9UC06 446 aaPredicted RBP11.71□□□□□ -0.53
SAMM50-206ENST00000494795 MEIS2O14770 477 aa11.71□□□□□ -0.54
SAMM50-206ENST00000494795 ABL1P00519 1130 aa11.71□□□□□ -0.54
SAMM50-206ENST00000494795 ERCC5P28715 1186 aaPredicted RBP11.71□□□□□ -0.54
SAMM50-206ENST00000494795 UBXN2AP68543 259 aa11.71□□□□□ -0.54
SAMM50-206ENST00000494795 RBL2Q08999 1139 aa11.71□□□□□ -0.54
SAMM50-206ENST00000494795 KRT31Q15323 416 aa11.71□□□□□ -0.54
SAMM50-206ENST00000494795 GALNT17Q6IS24 598 aa11.71□□□□□ -0.54
SAMM50-206ENST00000494795 TRIM34Q9BYJ4 488 aa11.71□□□□□ -0.54
SAMM50-206ENST00000494795 RIC8AQ9NPQ8 531 aa11.71□□□□□ -0.54
SAMM50-206ENST00000494795 IMPACTQ9P2X3 320 aa11.71□□□□□ -0.54
SAMM50-206ENST00000494795 ADD3Q9UEY8 706 aaKnown RBP11.71□□□□□ -0.54
SAMM50-206ENST00000494795 A0A1B0GTH6 734 aa11.7□□□□□ -0.54
SAMM50-206ENST00000494795 TRIM9Q9C026 710 aa11.7□□□□□ -0.54
SAMM50-206ENST00000494795 CCSER1Q9C0I3 900 aa11.7□□□□□ -0.54
SAMM50-206ENST00000494795 KANSL2Q9H9L4 492 aa11.7□□□□□ -0.54
SAMM50-206ENST00000494795 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.7□□□□□ -0.54
SAMM50-206ENST00000494795 SLC39A2Q9NP94 309 aa11.7□□□□□ -0.54
SAMM50-206ENST00000494795 FBXO28Q9NVF7 368 aa11.7□□□□□ -0.54
SAMM50-206ENST00000494795 NPHP3-ACAD11A0A0J9YXS1 232 aa11.7□□□□□ -0.54
SAMM50-206ENST00000494795 MYMKA6NI61 221 aa11.7□□□□□ -0.54
SAMM50-206ENST00000494795 SOWAHDA6NJG2 315 aa11.7□□□□□ -0.54
SAMM50-206ENST00000494795 FXR1P51114 621 aaKnown RBP eCLIP11.7□□□□□ -0.54
SAMM50-206ENST00000494795 PRELPP51888 382 aa11.7□□□□□ -0.54
SAMM50-206ENST00000494795 CXCL9Q07325 125 aa11.7□□□□□ -0.54
SAMM50-206ENST00000494795 ZNF658Q5TYW1 1059 aaPredicted RBP11.7□□□□□ -0.54
SAMM50-206ENST00000494795 CCDC12Q8WUD4 166 aaPredicted RBP11.7□□□□□ -0.54
SAMM50-206ENST00000494795 IRX2Q9BZI1 471 aaPredicted RBP11.7□□□□□ -0.54
SAMM50-206ENST00000494795 DHX36Q9H2U1 1008 aaKnown RBP11.7□□□□□ -0.54
SAMM50-206ENST00000494795 SMARCA1P28370 1054 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 KLK7P49862 253 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 GSDMDP57764 484 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 LRRC41Q15345 812 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 LRWD1Q9UFC0 647 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 C10orf71Q711Q0 1435 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 ESYT2A0FGR8 921 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 TXLNAP40222 546 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 PAK1Q13153 545 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 PRAMEF18Q5VWM3 479 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 SPECC1LQ69YQ0 1117 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 KIAA0895Q8NCT3 520 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 MKL1Q969V6 931 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 NYAP2Q9P242 653 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 DDX25Q9UHL0 483 aaKnown RBP11.69□□□□□ -0.54
SAMM50-206ENST00000494795 TPM2P07951 284 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 VIL1P09327 827 aaKnown RBP11.69□□□□□ -0.54
SAMM50-206ENST00000494795 PRPHP41219 470 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 ASIC1P78348 528 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 CCDC93Q567U6 631 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 FAM83BQ5T0W9 1011 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 GPATCH4Q5T3I0 446 aaKnown RBP11.69□□□□□ -0.54
SAMM50-206ENST00000494795 CC2D2BQ6DHV5 1058 aa11.69□□□□□ -0.54
SAMM50-206ENST00000494795 SYT10Q6XYQ8 523 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms