RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 CCL23P55773 120 aa17.25■□□□□ 0.35
PCCB-219ENST00000494742 BAATQ14032 418 aaPredicted RBP17.25■□□□□ 0.35
PCCB-219ENST00000494742 SYDE2Q5VT97 1194 aa17.25■□□□□ 0.35
PCCB-219ENST00000494742 CHMP4CQ96CF2 233 aa17.25■□□□□ 0.35
PCCB-219ENST00000494742 MPHOSPH6Q99547 160 aaKnown RBP17.25■□□□□ 0.35
PCCB-219ENST00000494742 WDR11Q9BZH6 1224 aa17.25■□□□□ 0.35
PCCB-219ENST00000494742 INCENPQ9NQS7 918 aa17.25■□□□□ 0.35
PCCB-219ENST00000494742 ZBTB47Q9UFB7 747 aaPredicted RBP17.25■□□□□ 0.35
PCCB-219ENST00000494742 PCDHA11Q9Y5I1 949 aa17.25■□□□□ 0.35
PCCB-219ENST00000494742 SLC4A7Q9Y6M7 1214 aa17.25■□□□□ 0.35
PCCB-219ENST00000494742 ZMYM6O95789 1325 aa17.24■□□□□ 0.35
PCCB-219ENST00000494742 NKRFO15226 690 aaKnown RBP eCLIP17.24■□□□□ 0.35
PCCB-219ENST00000494742 PSMC6P62333 389 aa17.24■□□□□ 0.35
PCCB-219ENST00000494742 PURAQ00577 322 aaKnown RBP17.24■□□□□ 0.35
PCCB-219ENST00000494742 ADGRE1Q14246 886 aa17.24■□□□□ 0.35
PCCB-219ENST00000494742 BRDTQ58F21 947 aaPredicted RBP17.24■□□□□ 0.35
PCCB-219ENST00000494742 VPS53Q5VIR6 699 aa17.24■□□□□ 0.35
PCCB-219ENST00000494742 TTC14Q96N46 770 aa17.24■□□□□ 0.35
PCCB-219ENST00000494742 ASB2Q96Q27 587 aa17.24■□□□□ 0.35
PCCB-219ENST00000494742 NKX2-4Q9H2Z4 354 aa17.24■□□□□ 0.35
PCCB-219ENST00000494742 DDX49Q9Y6V7 483 aaKnown RBP17.24■□□□□ 0.35
PCCB-219ENST00000494742 KPNA6O60684 536 aa17.23■□□□□ 0.35
PCCB-219ENST00000494742 PCP11498 1178 aaKnown RBP17.23■□□□□ 0.35
PCCB-219ENST00000494742 PTGS1P23219 599 aa17.23■□□□□ 0.35
PCCB-219ENST00000494742 SLC16A2P36021 539 aa17.23■□□□□ 0.35
PCCB-219ENST00000494742 MRPS5P82675 430 aaKnown RBP17.23■□□□□ 0.35
PCCB-219ENST00000494742 TMEM63BQ5T3F8 832 aa17.23■□□□□ 0.35
PCCB-219ENST00000494742 TTBK2Q6IQ55 1244 aa17.23■□□□□ 0.35
PCCB-219ENST00000494742 RASGRP2Q7LDG7 609 aa17.23■□□□□ 0.35
PCCB-219ENST00000494742 PPM1EQ8WY54 764 aa17.23■□□□□ 0.35
PCCB-219ENST00000494742 PURBQ96QR8 312 aaKnown RBP17.23■□□□□ 0.35
PCCB-219ENST00000494742 TMEM47Q9BQJ4 181 aa17.23■□□□□ 0.35
PCCB-219ENST00000494742 MTG1Q9BT17 334 aaPredicted RBP17.23■□□□□ 0.35
PCCB-219ENST00000494742 MAF1Q9H063 256 aa17.23■□□□□ 0.35
PCCB-219ENST00000494742 GPHNQ9NQX3 736 aaPredicted RBP17.23■□□□□ 0.35
PCCB-219ENST00000494742 MTMR7Q9Y216 660 aa17.23■□□□□ 0.35
PCCB-219ENST00000494742 YBX2Q9Y2T7 364 aaKnown RBP17.23■□□□□ 0.35
PCCB-219ENST00000494742 TNKSO95271 1327 aa17.22■□□□□ 0.35
PCCB-219ENST00000494742 WDR19Q8NEZ3 1342 aa17.22■□□□□ 0.35
PCCB-219ENST00000494742 RAD50Q92878 1312 aa17.22■□□□□ 0.35
PCCB-219ENST00000494742 PTPDC1A2A3K4 754 aa17.22■□□□□ 0.35
PCCB-219ENST00000494742 B4DLN1 442 aa17.22■□□□□ 0.35
PCCB-219ENST00000494742 NFIBO00712 420 aa17.22■□□□□ 0.35
PCCB-219ENST00000494742 FGAP02671 866 aa17.22■□□□□ 0.35
PCCB-219ENST00000494742 RFC2P35250 354 aa17.22■□□□□ 0.35
PCCB-219ENST00000494742 MRPL12P52815 198 aaKnown RBP17.22■□□□□ 0.35
PCCB-219ENST00000494742 MCMDC2Q4G0Z9 681 aa17.22■□□□□ 0.35
PCCB-219ENST00000494742 RNF207Q6ZRF8 634 aa17.22■□□□□ 0.35
PCCB-219ENST00000494742 DNERQ8NFT8 737 aa17.22■□□□□ 0.35
PCCB-219ENST00000494742 TSPYL2Q9H2G4 693 aaPredicted RBP17.22■□□□□ 0.35
PCCB-219ENST00000494742 TOMM22Q9NS69 142 aa17.22■□□□□ 0.35
PCCB-219ENST00000494742 MYO9BQ13459 2157 aa17.22■□□□□ 0.35
PCCB-219ENST00000494742 SCN10AQ9Y5Y9 1956 aa17.21■□□□□ 0.35
PCCB-219ENST00000494742 PDHBP11177 359 aa17.21■□□□□ 0.35
PCCB-219ENST00000494742 ATP2A2P16615 1042 aaKnown RBP17.21■□□□□ 0.35
PCCB-219ENST00000494742 IGFBP4P22692 258 aa17.21■□□□□ 0.35
PCCB-219ENST00000494742 EDNRBP24530 442 aa17.21■□□□□ 0.35
PCCB-219ENST00000494742 NT5C2P49902 561 aa17.21■□□□□ 0.35
PCCB-219ENST00000494742 PTPN11Q06124 597 aaPredicted RBP17.21■□□□□ 0.35
PCCB-219ENST00000494742 PPP2R2DQ66LE6 453 aa17.21■□□□□ 0.35
PCCB-219ENST00000494742 NFRKBQ6P4R8 1299 aa17.21■□□□□ 0.35
PCCB-219ENST00000494742 OR6J1Q8NGC5 347 aa17.21■□□□□ 0.35
PCCB-219ENST00000494742 SCFD2Q8WU76 684 aa17.21■□□□□ 0.35
PCCB-219ENST00000494742 CLEC4DQ8WXI8 215 aa17.21■□□□□ 0.35
PCCB-219ENST00000494742 VWCEQ96DN2 955 aa17.21■□□□□ 0.35
PCCB-219ENST00000494742 MUC3AQ02505 3323 aa17.21■□□□□ 0.35
PCCB-219ENST00000494742 A6NJR5 290 aa17.2■□□□□ 0.34
PCCB-219ENST00000494742 PITPNM1O00562 1244 aa17.2■□□□□ 0.34
PCCB-219ENST00000494742 MYL3P08590 195 aa17.2■□□□□ 0.34
PCCB-219ENST00000494742 SNHG28P0DPA3 235 aa17.2■□□□□ 0.34
PCCB-219ENST00000494742 ACTN1P12814 892 aa17.2■□□□□ 0.34
PCCB-219ENST00000494742 PDE4DQ08499 809 aa17.2■□□□□ 0.34
PCCB-219ENST00000494742 ZNF543Q08ER8 600 aa17.2■□□□□ 0.34
PCCB-219ENST00000494742 PPP2R5BQ15173 497 aa17.2■□□□□ 0.34
PCCB-219ENST00000494742 RRP12Q5JTH9 1297 aaKnown RBP17.2■□□□□ 0.34
PCCB-219ENST00000494742 ANKRD45Q5TZF3 282 aa17.2■□□□□ 0.34
PCCB-219ENST00000494742 RGS22Q8NE09 1264 aa17.2■□□□□ 0.34
PCCB-219ENST00000494742 SCLYQ96I15 445 aa17.2■□□□□ 0.34
PCCB-219ENST00000494742 GPCPD1Q9NPB8 672 aa17.2■□□□□ 0.34
PCCB-219ENST00000494742 TRMT13Q9NUP7 481 aaKnown RBP17.2■□□□□ 0.34
PCCB-219ENST00000494742 FRMPD2Q68DX3 1309 aaPredicted RBP17.2■□□□□ 0.34
PCCB-219ENST00000494742 ZBBXA8MT70 800 aa17.19■□□□□ 0.34
PCCB-219ENST00000494742 HSPD1P10809 573 aaKnown RBP17.19■□□□□ 0.34
PCCB-219ENST00000494742 CYP2C9P11712 490 aa17.19■□□□□ 0.34
PCCB-219ENST00000494742 POU3F3P20264 500 aaPredicted RBP17.19■□□□□ 0.34
PCCB-219ENST00000494742 CALML3P27482 149 aa17.19■□□□□ 0.34
PCCB-219ENST00000494742 RABGGTBP53611 331 aa17.19■□□□□ 0.34
PCCB-219ENST00000494742 PDE1AP54750 535 aa17.19■□□□□ 0.34
PCCB-219ENST00000494742 RPS6P62753 249 aaKnown RBP17.19■□□□□ 0.34
PCCB-219ENST00000494742 GPATCH4Q5T3I0 446 aaKnown RBP17.19■□□□□ 0.34
PCCB-219ENST00000494742 SLC30A10Q6XR72 485 aa17.19■□□□□ 0.34
PCCB-219ENST00000494742 PHOSPHO2Q8TCD6 241 aa17.19■□□□□ 0.34
PCCB-219ENST00000494742 TANC1Q9C0D5 1861 aa17.18■□□□□ 0.34
PCCB-219ENST00000494742 CCDC85BQ15834 202 aaPredicted RBP17.18■□□□□ 0.34
PCCB-219ENST00000494742 NBPF20Q3BBV1 942 aa17.18■□□□□ 0.34
PCCB-219ENST00000494742 TMEM67Q5HYA8 995 aa17.18■□□□□ 0.34
PCCB-219ENST00000494742 MFSD6Q6ZSS7 791 aa17.18■□□□□ 0.34
PCCB-219ENST00000494742 IL27Q8NEV9 243 aa17.18■□□□□ 0.34
PCCB-219ENST00000494742 ADAMTS19Q8TE59 1207 aa17.18■□□□□ 0.34
PCCB-219ENST00000494742 FAM227BQ96M60 508 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms