RNA–Protein interactions for RNA: ENST00000494722.1

SNX8-209, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-209ENST00000494722 ZSCAN10Q96SZ4 725 aaPredicted RBP21.51■■□□□ 1.03
SNX8-209ENST00000494722 ZKSCAN3Q9BRR0 538 aa21.51■■□□□ 1.03
SNX8-209ENST00000494722 GTF3C3Q9Y5Q9 886 aa21.51■■□□□ 1.03
SNX8-209ENST00000494722 DYNC1LI2O43237 492 aaPredicted RBP21.5■■□□□ 1.03
SNX8-209ENST00000494722 IRX6P78412 446 aaPredicted RBP21.5■■□□□ 1.03
SNX8-209ENST00000494722 BEX3Q00994 111 aa21.5■■□□□ 1.03
SNX8-209ENST00000494722 FAM126BQ8IXS8 530 aa21.5■■□□□ 1.03
SNX8-209ENST00000494722 RGS22Q8NE09 1264 aa21.5■■□□□ 1.03
SNX8-209ENST00000494722 DNERQ8NFT8 737 aa21.5■■□□□ 1.03
SNX8-209ENST00000494722 MYH6P13533 1939 aa21.49■■□□□ 1.03
SNX8-209ENST00000494722 B4E1Z4 1266 aa21.49■■□□□ 1.03
SNX8-209ENST00000494722 CALML3P27482 149 aa21.49■■□□□ 1.03
SNX8-209ENST00000494722 PPIGQ13427 754 aaKnown RBP eCLIP21.49■■□□□ 1.03
SNX8-209ENST00000494722 DUSP28Q4G0W2 176 aa21.49■■□□□ 1.03
SNX8-209ENST00000494722 ASPRV1Q53RT3 343 aa21.49■■□□□ 1.03
SNX8-209ENST00000494722 MFSD5Q6N075 450 aa21.49■■□□□ 1.03
SNX8-209ENST00000494722 CXCL17Q6UXB2 119 aa21.49■■□□□ 1.03
SNX8-209ENST00000494722 TMEM199Q8N511 208 aa21.49■■□□□ 1.03
SNX8-209ENST00000494722 PDGFCQ9NRA1 345 aa21.49■■□□□ 1.03
SNX8-209ENST00000494722 RAD50Q92878 1312 aa21.49■■□□□ 1.03
SNX8-209ENST00000494722 SLC30A10Q6XR72 485 aa21.48■■□□□ 1.03
SNX8-209ENST00000494722 SLC43A3Q8NBI5 491 aa21.48■■□□□ 1.03
SNX8-209ENST00000494722 PURBQ96QR8 312 aaKnown RBP21.48■■□□□ 1.03
SNX8-209ENST00000494722 UBAC1Q9BSL1 405 aa21.48■■□□□ 1.03
SNX8-209ENST00000494722 ZSWIM5Q9P217 1185 aa21.48■■□□□ 1.03
SNX8-209ENST00000494722 TMEM265A0A087WTH1 108 aa21.47■■□□□ 1.03
SNX8-209ENST00000494722 RBM47A0AV96 593 aaKnown RBP21.47■■□□□ 1.03
SNX8-209ENST00000494722 NKRFO15226 690 aaKnown RBP eCLIP21.47■■□□□ 1.03
SNX8-209ENST00000494722 CD4P01730 458 aa21.47■■□□□ 1.03
SNX8-209ENST00000494722 GOLGA8HP0CJ92 632 aa21.47■■□□□ 1.03
SNX8-209ENST00000494722 EPHB4P54760 987 aa21.47■■□□□ 1.03
SNX8-209ENST00000494722 RPS6P62753 249 aaKnown RBP21.47■■□□□ 1.03
SNX8-209ENST00000494722 PDE4DQ08499 809 aa21.47■■□□□ 1.03
SNX8-209ENST00000494722 ITGA7Q13683 1181 aa21.47■■□□□ 1.03
SNX8-209ENST00000494722 TTC22Q5TAA0 569 aa21.47■■□□□ 1.03
SNX8-209ENST00000494722 ENAHQ8N8S7 591 aaPredicted RBP21.47■■□□□ 1.03
SNX8-209ENST00000494722 RUFY2Q8WXA3 655 aa21.47■■□□□ 1.03
SNX8-209ENST00000494722 WDR11Q9BZH6 1224 aa21.47■■□□□ 1.03
SNX8-209ENST00000494722 POLR3EQ9NVU0 708 aa21.47■■□□□ 1.03
SNX8-209ENST00000494722 TNKSO95271 1327 aa21.47■■□□□ 1.03
SNX8-209ENST00000494722 ABCB11O95342 1321 aa21.47■■□□□ 1.03
SNX8-209ENST00000494722 PARP1P09874 1014 aaKnown RBP21.46■■□□□ 1.03
SNX8-209ENST00000494722 CPT1AP50416 773 aa21.46■■□□□ 1.03
SNX8-209ENST00000494722 CDC37Q16543 378 aaPredicted RBP21.46■■□□□ 1.03
SNX8-209ENST00000494722 BRDTQ58F21 947 aaPredicted RBP21.46■■□□□ 1.03
SNX8-209ENST00000494722 GUCD1Q96NT3 240 aa21.46■■□□□ 1.03
SNX8-209ENST00000494722 DDX49Q9Y6V7 483 aaKnown RBP21.46■■□□□ 1.03
SNX8-209ENST00000494722 EDNRBP24530 442 aa21.45■■□□□ 1.02
SNX8-209ENST00000494722 TRDNQ13061 729 aa21.45■■□□□ 1.02
SNX8-209ENST00000494722 USH1GQ495M9 461 aa21.45■■□□□ 1.02
SNX8-209ENST00000494722 MCF2L2Q86YR7 1114 aa21.45■■□□□ 1.02
SNX8-209ENST00000494722 SCFD2Q8WU76 684 aa21.45■■□□□ 1.02
SNX8-209ENST00000494722 UBA5Q9GZZ9 404 aa21.45■■□□□ 1.02
SNX8-209ENST00000494722 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.44■■□□□ 1.02
SNX8-209ENST00000494722 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.44■■□□□ 1.02
SNX8-209ENST00000494722 PDE4AP27815 886 aa21.44■■□□□ 1.02
SNX8-209ENST00000494722 PPP2R5BQ15173 497 aa21.44■■□□□ 1.02
SNX8-209ENST00000494722 IFIT1BQ5T764 474 aaKnown RBP21.44■■□□□ 1.02
SNX8-209ENST00000494722 PSRC1Q6PGN9 363 aaPredicted RBP21.44■■□□□ 1.02
SNX8-209ENST00000494722 ADGRF4Q8IZF3 695 aa21.44■■□□□ 1.02
SNX8-209ENST00000494722 FAM161BQ96MY7 647 aa21.44■■□□□ 1.02
SNX8-209ENST00000494722 SEMA6BQ9H3T3 888 aa21.44■■□□□ 1.02
SNX8-209ENST00000494722 DHX16O60231 1041 aaKnown RBP21.43■■□□□ 1.02
SNX8-209ENST00000494722 KPNA6O60684 536 aa21.43■■□□□ 1.02
SNX8-209ENST00000494722 OR6J1Q8NGC5 347 aa21.43■■□□□ 1.02
SNX8-209ENST00000494722 GPHNQ9NQX3 736 aaPredicted RBP21.43■■□□□ 1.02
SNX8-209ENST00000494722 MRPL11Q9Y3B7 192 aaKnown RBP21.43■■□□□ 1.02
SNX8-209ENST00000494722 GSPT1P15170 499 aaKnown RBP21.42■■□□□ 1.02
SNX8-209ENST00000494722 ERICH6BQ5W0A0 696 aa21.42■■□□□ 1.02
SNX8-209ENST00000494722 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.42■■□□□ 1.02
SNX8-209ENST00000494722 PPP1R12CQ9BZL4 782 aa21.42■■□□□ 1.02
SNX8-209ENST00000494722 MTIF3Q9H2K0 278 aaKnown RBP21.42■■□□□ 1.02
SNX8-209ENST00000494722 CPVLQ9H3G5 476 aa21.42■■□□□ 1.02
SNX8-209ENST00000494722 HIPK3Q9H422 1215 aa21.42■■□□□ 1.02
SNX8-209ENST00000494722 U3KPZ7 1027 aaPredicted RBP21.42■■□□□ 1.02
SNX8-209ENST00000494722 GRIN2DO15399 1336 aa21.41■■□□□ 1.02
SNX8-209ENST00000494722 SUPT20HL2P0C7V6 817 aa21.41■■□□□ 1.02
SNX8-209ENST00000494722 CSF2RAP15509 400 aa21.41■■□□□ 1.02
SNX8-209ENST00000494722 TTLL4Q14679 1199 aa21.41■■□□□ 1.02
SNX8-209ENST00000494722 QRICH1Q2TAL8 776 aa21.41■■□□□ 1.02
SNX8-209ENST00000494722 TMEM63BQ5T3F8 832 aa21.41■■□□□ 1.02
SNX8-209ENST00000494722 FBXO11Q86XK2 927 aa21.41■■□□□ 1.02
SNX8-209ENST00000494722 NSUN6Q8TEA1 469 aaKnown RBP21.41■■□□□ 1.02
SNX8-209ENST00000494722 IWS1Q96ST2 819 aa21.41■■□□□ 1.02
SNX8-209ENST00000494722 IL23AQ9NPF7 189 aa21.41■■□□□ 1.02
SNX8-209ENST00000494722 PTGS1P23219 599 aa21.4■■□□□ 1.02
SNX8-209ENST00000494722 PURAQ00577 322 aaKnown RBP21.4■■□□□ 1.02
SNX8-209ENST00000494722 TMEM240Q5SV17 173 aa21.4■■□□□ 1.02
SNX8-209ENST00000494722 CDX2Q99626 313 aaPredicted RBP21.4■■□□□ 1.02
SNX8-209ENST00000494722 MTG1Q9BT17 334 aaPredicted RBP21.4■■□□□ 1.02
SNX8-209ENST00000494722 IL25Q9H293 177 aa21.4■■□□□ 1.02
SNX8-209ENST00000494722 SCN10AQ9Y5Y9 1956 aa21.39■■□□□ 1.02
SNX8-209ENST00000494722 KIAA1217Q5T5P2 1943 aa21.39■■□□□ 1.02
SNX8-209ENST00000494722 ERICH2A1L162 156 aa21.39■■□□□ 1.01
SNX8-209ENST00000494722 B4GALT4O60513 344 aa21.39■■□□□ 1.01
SNX8-209ENST00000494722 MYL3P08590 195 aa21.39■■□□□ 1.01
SNX8-209ENST00000494722 TXNP10599 105 aaKnown RBP21.39■■□□□ 1.01
SNX8-209ENST00000494722 CHMLP26374 656 aa21.39■■□□□ 1.01
SNX8-209ENST00000494722 CYP2C18P33260 490 aa21.39■■□□□ 1.01
SNX8-209ENST00000494722 PSMC6P62333 389 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms