RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 NKRFO15226 690 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCRN1-209ENST00000494620 TLR3O15455 904 aaKnown RBP12.79□□□□□ -0.36
SCRN1-209ENST00000494620 ASGR1P07306 291 aa12.79□□□□□ -0.36
SCRN1-209ENST00000494620 CALM1P0DP23 149 aa12.79□□□□□ -0.36
SCRN1-209ENST00000494620 CALM2P0DP24 149 aa12.79□□□□□ -0.36
SCRN1-209ENST00000494620 CALM3P0DP25 149 aa12.79□□□□□ -0.36
SCRN1-209ENST00000494620 MDM2Q00987 491 aaPredicted RBP12.79□□□□□ -0.36
SCRN1-209ENST00000494620 TLE2Q04725 743 aa12.79□□□□□ -0.36
SCRN1-209ENST00000494620 GRM4Q14833 912 aa12.79□□□□□ -0.36
SCRN1-209ENST00000494620 TRIM60Q495X7 471 aa12.79□□□□□ -0.36
SCRN1-209ENST00000494620 CREB3L3Q68CJ9 461 aa12.79□□□□□ -0.36
SCRN1-209ENST00000494620 CHST3Q7LGC8 479 aa12.79□□□□□ -0.36
SCRN1-209ENST00000494620 MORC4Q8TE76 937 aa12.79□□□□□ -0.36
SCRN1-209ENST00000494620 TOX2Q96NM4 488 aa12.79□□□□□ -0.36
SCRN1-209ENST00000494620 WDR11Q9BZH6 1224 aa12.79□□□□□ -0.36
SCRN1-209ENST00000494620 LSG1Q9H089 658 aaKnown RBP12.79□□□□□ -0.36
SCRN1-209ENST00000494620 UPF3AQ9H1J1 476 aaKnown RBP12.79□□□□□ -0.36
SCRN1-209ENST00000494620 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
SCRN1-209ENST00000494620 PCDHA1Q9Y5I3 950 aa12.79□□□□□ -0.36
SCRN1-209ENST00000494620 MKI67P46013 3256 aaKnown RBP12.79□□□□□ -0.36
SCRN1-209ENST00000494620 COL11A1P12107 1806 aaPredicted RBP12.78□□□□□ -0.36
SCRN1-209ENST00000494620 A0A0U1RQG5 324 aaPredicted RBP12.78□□□□□ -0.36
SCRN1-209ENST00000494620 SLC27A2O14975 620 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 PRC1O43663 620 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 PQBP1O60828 265 aaKnown RBP12.78□□□□□ -0.36
SCRN1-209ENST00000494620 KRT32Q14532 448 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 TTLL4Q14679 1199 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 SNX17Q15036 470 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 FSCN1Q16658 493 aaKnown RBP12.78□□□□□ -0.36
SCRN1-209ENST00000494620 ARHGEF16Q5VV41 709 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 TLK2Q86UE8 772 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 HOMER1Q86YM7 354 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 FBXO16Q8IX29 292 aaPredicted RBP12.78□□□□□ -0.36
SCRN1-209ENST00000494620 STAG2Q8N3U4 1231 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 IGDCC4Q8TDY8 1250 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 SCFD2Q8WU76 684 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 LENG1Q96BZ8 264 aaPredicted RBP12.78□□□□□ -0.36
SCRN1-209ENST00000494620 IWS1Q96ST2 819 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 MAP3K14Q99558 947 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 KATNBL1Q9H079 304 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 TMEM39AQ9NV64 488 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 MAD2L2Q9UI95 211 aa12.78□□□□□ -0.36
SCRN1-209ENST00000494620 PARP14Q460N5 1801 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 PNMA6FA0A0J9YX94 578 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 DDAH1O94760 285 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 CFBP00751 764 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 CENPBP07199 599 aaPredicted RBP12.77□□□□□ -0.37
SCRN1-209ENST00000494620 CLTBP09497 229 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 RAG1P15918 1043 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 SMPD1P17405 629 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 SMARCA1P28370 1054 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 CPT1AP50416 773 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 NKX3-2P78367 333 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 PPP2R5BQ15173 497 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 NECTIN1Q15223 517 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 STXBP2Q15833 593 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 DUSP28Q4G0W2 176 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 TAPT1Q6NXT6 567 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 SLC30A10Q6XR72 485 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 MB21D2Q8IYB1 491 aaPredicted RBP12.77□□□□□ -0.37
SCRN1-209ENST00000494620 TDHQ8IZJ6 230 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 SYTL5Q8TDW5 730 aaPredicted RBP12.77□□□□□ -0.37
SCRN1-209ENST00000494620 NEK1Q96PY6 1258 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 PURBQ96QR8 312 aaKnown RBP12.77□□□□□ -0.37
SCRN1-209ENST00000494620 RMDN3Q96TC7 470 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 PRO3102Q9H379 93 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 PDGFCQ9NRA1 345 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 POLR3EQ9NVU0 708 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 SEC63Q9UGP8 760 aaKnown RBP12.77□□□□□ -0.37
SCRN1-209ENST00000494620 GNEQ9Y223 722 aaKnown RBP12.77□□□□□ -0.37
SCRN1-209ENST00000494620 SLC12A7Q9Y666 1083 aa12.77□□□□□ -0.37
SCRN1-209ENST00000494620 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.76□□□□□ -0.37
SCRN1-209ENST00000494620 GCOM1H8Y6P7 765 aaPredicted RBP12.76□□□□□ -0.37
SCRN1-209ENST00000494620 ARVCFO00192 962 aa12.76□□□□□ -0.37
SCRN1-209ENST00000494620 KPNA6O60684 536 aa12.76□□□□□ -0.37
SCRN1-209ENST00000494620 HMGB1P09429 215 aaKnown RBP12.76□□□□□ -0.37
SCRN1-209ENST00000494620 POLR2MP0CAP2 368 aa12.76□□□□□ -0.37
SCRN1-209ENST00000494620 TXNP10599 105 aaKnown RBP12.76□□□□□ -0.37
SCRN1-209ENST00000494620 LIFRP42702 1097 aa12.76□□□□□ -0.37
SCRN1-209ENST00000494620 FGD1P98174 961 aa12.76□□□□□ -0.37
SCRN1-209ENST00000494620 TROAPQ12815 778 aa12.76□□□□□ -0.37
SCRN1-209ENST00000494620 CCSAPQ6IQ19 270 aaPredicted RBP12.76□□□□□ -0.37
SCRN1-209ENST00000494620 STOX1Q6ZVD7 989 aa12.76□□□□□ -0.37
SCRN1-209ENST00000494620 ZNF654Q8IZM8 581 aa12.76□□□□□ -0.37
SCRN1-209ENST00000494620 RRP36Q96EU6 259 aaKnown RBP12.76□□□□□ -0.37
SCRN1-209ENST00000494620 PIGSQ96S52 555 aa12.76□□□□□ -0.37
SCRN1-209ENST00000494620 RIOX1Q9H6W3 641 aa12.76□□□□□ -0.37
SCRN1-209ENST00000494620 SMCHD1A6NHR9 2005 aa12.76□□□□□ -0.37
SCRN1-209ENST00000494620 CENPFP49454 3210 aa12.75□□□□□ -0.37
SCRN1-209ENST00000494620 RBM47A0AV96 593 aaKnown RBP12.75□□□□□ -0.37
SCRN1-209ENST00000494620 CEP290O15078 2479 aa12.75□□□□□ -0.37
SCRN1-209ENST00000494620 EIF3JO75822 258 aaKnown RBP12.75□□□□□ -0.37
SCRN1-209ENST00000494620 BEX3Q00994 111 aa12.75□□□□□ -0.37
SCRN1-209ENST00000494620 ERICH6BQ5W0A0 696 aa12.75□□□□□ -0.37
SCRN1-209ENST00000494620 ANKRD33Q7Z3H0 272 aa12.75□□□□□ -0.37
SCRN1-209ENST00000494620 OR6J1Q8NGC5 347 aa12.75□□□□□ -0.37
SCRN1-209ENST00000494620 CUL5Q93034 780 aa12.75□□□□□ -0.37
SCRN1-209ENST00000494620 MTMR8Q96EF0 704 aa12.75□□□□□ -0.37
SCRN1-209ENST00000494620 TAAR1Q96RJ0 339 aa12.75□□□□□ -0.37
SCRN1-209ENST00000494620 MYADML2A6NDP7 307 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms