RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PWP2Q15269 919 aaKnown RBP38.66■■■■□ 3.78
CBX4-203ENST00000494546 GNASQ5JWF2 1037 aa38.66■■■■□ 3.78
CBX4-203ENST00000494546 C1orf53Q5VUE5 145 aa38.66■■■■□ 3.78
CBX4-203ENST00000494546 CATIPQ7Z7H3 387 aa38.66■■■■□ 3.78
CBX4-203ENST00000494546 PCSK9Q8NBP7 692 aaKnown RBP38.66■■■■□ 3.78
CBX4-203ENST00000494546 RGS22Q8NE09 1264 aa38.66■■■■□ 3.78
CBX4-203ENST00000494546 NUP133Q8WUM0 1156 aa38.66■■■■□ 3.78
CBX4-203ENST00000494546 PRDM5Q9NQX1 630 aaPredicted RBP38.66■■■■□ 3.78
CBX4-203ENST00000494546 STARD7Q9NQZ5 370 aa38.66■■■■□ 3.78
CBX4-203ENST00000494546 IQSEC1Q6DN90 963 aa38.65■■■■□ 3.78
CBX4-203ENST00000494546 TBC1D5Q92609 795 aa38.65■■■■□ 3.78
CBX4-203ENST00000494546 MPHOSPH6Q99547 160 aaKnown RBP38.65■■■■□ 3.78
CBX4-203ENST00000494546 GNEQ9Y223 722 aaKnown RBP38.65■■■■□ 3.78
CBX4-203ENST00000494546 MRPL11Q9Y3B7 192 aaKnown RBP38.65■■■■□ 3.78
CBX4-203ENST00000494546 DNAH12Q6ZR08 3092 aa38.65■■■■□ 3.78
CBX4-203ENST00000494546 A0A1W2PPC1 479 aa38.64■■■■□ 3.78
CBX4-203ENST00000494546 PRC1O43663 620 aa38.64■■■■□ 3.78
CBX4-203ENST00000494546 PDE4DQ08499 809 aa38.64■■■■□ 3.78
CBX4-203ENST00000494546 TROAPQ12815 778 aa38.64■■■■□ 3.78
CBX4-203ENST00000494546 TLK2Q86UE8 772 aa38.64■■■■□ 3.78
CBX4-203ENST00000494546 DNERQ8NFT8 737 aa38.64■■■■□ 3.78
CBX4-203ENST00000494546 AMNQ9BXJ7 453 aa38.64■■■■□ 3.78
CBX4-203ENST00000494546 GPHNQ9NQX3 736 aaPredicted RBP38.64■■■■□ 3.78
CBX4-203ENST00000494546 ASGR1P07306 291 aa38.63■■■■□ 3.77
CBX4-203ENST00000494546 PTGS1P23219 599 aa38.63■■■■□ 3.77
CBX4-203ENST00000494546 MCM5P33992 734 aa38.63■■■■□ 3.77
CBX4-203ENST00000494546 TLE2Q04725 743 aa38.63■■■■□ 3.77
CBX4-203ENST00000494546 MCF2L2Q86YR7 1114 aa38.63■■■■□ 3.77
CBX4-203ENST00000494546 LBHD1Q9BQE6 289 aaPredicted RBP38.63■■■■□ 3.77
CBX4-203ENST00000494546 UBE2OQ9C0C9 1292 aaKnown RBP38.63■■■■□ 3.77
CBX4-203ENST00000494546 AP5M1Q9H0R1 490 aa38.63■■■■□ 3.77
CBX4-203ENST00000494546 ZBTB5O15062 677 aa38.62■■■■□ 3.77
CBX4-203ENST00000494546 BEX3Q00994 111 aa38.62■■■■□ 3.77
CBX4-203ENST00000494546 HOMER1Q86YM7 354 aa38.62■■■■□ 3.77
CBX4-203ENST00000494546 VTI1AQ96AJ9 217 aa38.62■■■■□ 3.77
CBX4-203ENST00000494546 MTMR8Q96EF0 704 aa38.62■■■■□ 3.77
CBX4-203ENST00000494546 GLT1D1Q96MS3 346 aa38.62■■■■□ 3.77
CBX4-203ENST00000494546 LY9Q9HBG7 655 aa38.62■■■■□ 3.77
CBX4-203ENST00000494546 CTAGE5O15320 804 aa38.61■■■■□ 3.77
CBX4-203ENST00000494546 DYNC1LI2O43237 492 aaPredicted RBP38.61■■■■□ 3.77
CBX4-203ENST00000494546 TMEM63BQ5T3F8 832 aa38.61■■■■□ 3.77
CBX4-203ENST00000494546 PQBP1O60828 265 aaKnown RBP38.6■■■■□ 3.77
CBX4-203ENST00000494546 SLC35G1Q2M3R5 365 aa38.6■■■■□ 3.77
CBX4-203ENST00000494546 RNF20Q5VTR2 975 aa38.6■■■■□ 3.77
CBX4-203ENST00000494546 SYTL5Q8TDW5 730 aaPredicted RBP38.6■■■■□ 3.77
CBX4-203ENST00000494546 MAF1Q9H063 256 aa38.6■■■■□ 3.77
CBX4-203ENST00000494546 PDLIM7Q9NR12 457 aa38.6■■■■□ 3.77
CBX4-203ENST00000494546 B4DLN1 442 aa38.59■■■■□ 3.77
CBX4-203ENST00000494546 PPP1R11O60927 126 aaPredicted RBP38.59■■■■□ 3.77
CBX4-203ENST00000494546 MRPL12P52815 198 aaKnown RBP38.59■■■■□ 3.77
CBX4-203ENST00000494546 NKX3-2P78367 333 aa38.59■■■■□ 3.77
CBX4-203ENST00000494546 COL9A3Q14050 684 aaPredicted RBP38.59■■■■□ 3.77
CBX4-203ENST00000494546 NFXL1Q6ZNB6 911 aa38.59■■■■□ 3.77
CBX4-203ENST00000494546 ZNF654Q8IZM8 581 aa38.59■■■■□ 3.77
CBX4-203ENST00000494546 PIGSQ96S52 555 aa38.59■■■■□ 3.77
CBX4-203ENST00000494546 MTA3Q9BTC8 594 aa38.59■■■■□ 3.77
CBX4-203ENST00000494546 MYL10Q9BUA6 226 aa38.59■■■■□ 3.77
CBX4-203ENST00000494546 RIOX1Q9H6W3 641 aa38.59■■■■□ 3.77
CBX4-203ENST00000494546 MYH6P13533 1939 aa38.58■■■■□ 3.77
CBX4-203ENST00000494546 EDNRBP24530 442 aa38.58■■■■□ 3.77
CBX4-203ENST00000494546 FSCN1Q16658 493 aaKnown RBP38.58■■■■□ 3.77
CBX4-203ENST00000494546 SH3RF1Q7Z6J0 888 aa38.58■■■■□ 3.77
CBX4-203ENST00000494546 TMEM87BQ96K49 555 aa38.58■■■■□ 3.77
CBX4-203ENST00000494546 TAAR1Q96RJ0 339 aa38.58■■■■□ 3.77
CBX4-203ENST00000494546 WDR11Q9BZH6 1224 aa38.58■■■■□ 3.77
CBX4-203ENST00000494546 COL20A1Q9P218 1284 aa38.58■■■■□ 3.77
CBX4-203ENST00000494546 PCDHA1Q9Y5I3 950 aa38.58■■■■□ 3.77
CBX4-203ENST00000494546 RANBP2P49792 3224 aaKnown RBP38.58■■■■□ 3.77
CBX4-203ENST00000494546 SH2B2O14492 632 aaPredicted RBP38.57■■■■□ 3.76
CBX4-203ENST00000494546 DUSP28Q4G0W2 176 aa38.57■■■■□ 3.76
CBX4-203ENST00000494546 Q9Y3F1 56 aa38.57■■■■□ 3.76
CBX4-203ENST00000494546 ELP1O95163 1332 aa38.57■■■■□ 3.76
CBX4-203ENST00000494546 CFBP00751 764 aa38.56■■■■□ 3.76
CBX4-203ENST00000494546 CLTBP09497 229 aa38.56■■■■□ 3.76
CBX4-203ENST00000494546 CCDC69A6NI79 296 aa38.55■■■■□ 3.76
CBX4-203ENST00000494546 CYTH3O43739 400 aa38.55■■■■□ 3.76
CBX4-203ENST00000494546 DDAH1O94760 285 aa38.55■■■■□ 3.76
CBX4-203ENST00000494546 TDHQ8IZJ6 230 aa38.55■■■■□ 3.76
CBX4-203ENST00000494546 CTCFLQ8NI51 663 aaPredicted RBP38.55■■■■□ 3.76
CBX4-203ENST00000494546 NSUN6Q8TEA1 469 aaKnown RBP38.55■■■■□ 3.76
CBX4-203ENST00000494546 RBM47A0AV96 593 aaKnown RBP38.54■■■■□ 3.76
CBX4-203ENST00000494546 TRIM43BA6NCK2 446 aa38.54■■■■□ 3.76
CBX4-203ENST00000494546 TMTC2Q8N394 836 aa38.54■■■■□ 3.76
CBX4-203ENST00000494546 PIBF1Q8WXW3 757 aa38.54■■■■□ 3.76
CBX4-203ENST00000494546 TRIM43Q96BQ3 446 aaPredicted RBP38.54■■■■□ 3.76
CBX4-203ENST00000494546 LRRC2Q9BYS8 371 aa38.54■■■■□ 3.76
CBX4-203ENST00000494546 ZEB2O60315 1214 aa38.53■■■■□ 3.76
CBX4-203ENST00000494546 CXCL17Q6UXB2 119 aa38.53■■■■□ 3.76
CBX4-203ENST00000494546 ANKRD33Q7Z3H0 272 aa38.53■■■■□ 3.76
CBX4-203ENST00000494546 RMDN3Q96TC7 470 aa38.53■■■■□ 3.76
CBX4-203ENST00000494546 MAP3K14Q99558 947 aa38.53■■■■□ 3.76
CBX4-203ENST00000494546 A0A0U1RQG5 324 aaPredicted RBP38.52■■■■□ 3.76
CBX4-203ENST00000494546 DCDC2CA8MYV0 355 aa38.52■■■■□ 3.76
CBX4-203ENST00000494546 OPLAHO14841 1288 aa38.52■■■■□ 3.76
CBX4-203ENST00000494546 KIF5BP33176 963 aa38.52■■■■□ 3.76
CBX4-203ENST00000494546 TRAF1Q13077 416 aa38.52■■■■□ 3.76
CBX4-203ENST00000494546 SCFD2Q8WU76 684 aa38.52■■■■□ 3.76
CBX4-203ENST00000494546 TOX2Q96NM4 488 aa38.52■■■■□ 3.76
CBX4-203ENST00000494546 PNMA6FA0A0J9YX94 578 aa38.51■■■■□ 3.76
CBX4-203ENST00000494546 PPP2R5BQ15173 497 aa38.51■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms