RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 GPLD1P80108 840 aa9.95□□□□□ -0.82
RIF1-211ENST00000494333 ATP8B2P98198 1209 aa9.95□□□□□ -0.82
RIF1-211ENST00000494333 SREBF2Q12772 1141 aa9.95□□□□□ -0.82
RIF1-211ENST00000494333 TMC7Q7Z402 723 aa9.95□□□□□ -0.82
RIF1-211ENST00000494333 ITPRIPQ8IWB1 547 aa9.95□□□□□ -0.82
RIF1-211ENST00000494333 ANKRD13AQ8IZ07 590 aa9.95□□□□□ -0.82
RIF1-211ENST00000494333 C1orf127Q8N9H9 656 aa9.95□□□□□ -0.82
RIF1-211ENST00000494333 ABHD8Q96I13 439 aa9.95□□□□□ -0.82
RIF1-211ENST00000494333 TEPSINQ96N21 525 aa9.95□□□□□ -0.82
RIF1-211ENST00000494333 ENAMQ9NRM1 1142 aa9.95□□□□□ -0.82
RIF1-211ENST00000494333 HOXD8P13378 290 aaPredicted RBP9.94□□□□□ -0.82
RIF1-211ENST00000494333 AMPD1P23109 780 aa9.94□□□□□ -0.82
RIF1-211ENST00000494333 INHBEP58166 350 aa9.94□□□□□ -0.82
RIF1-211ENST00000494333 RASGRF1Q13972 1273 aa9.94□□□□□ -0.82
RIF1-211ENST00000494333 MVPQ14764 893 aaKnown RBP9.94□□□□□ -0.82
RIF1-211ENST00000494333 PCSK7Q16549 785 aa9.94□□□□□ -0.82
RIF1-211ENST00000494333 GORABQ5T7V8 394 aa9.94□□□□□ -0.82
RIF1-211ENST00000494333 HFE2Q6ZVN8 426 aa9.94□□□□□ -0.82
RIF1-211ENST00000494333 CHSY3Q70JA7 882 aa9.94□□□□□ -0.82
RIF1-211ENST00000494333 NEDD1Q8NHV4 660 aa9.94□□□□□ -0.82
RIF1-211ENST00000494333 DMRTB1Q96MA1 342 aa9.94□□□□□ -0.82
RIF1-211ENST00000494333 NSUN5Q96P11 429 aaKnown RBP9.94□□□□□ -0.82
RIF1-211ENST00000494333 MCOLN1Q9GZU1 580 aa9.94□□□□□ -0.82
RIF1-211ENST00000494333 ABCF2Q9UG63 623 aa9.94□□□□□ -0.82
RIF1-211ENST00000494333 STARD13Q9Y3M8 1113 aa9.94□□□□□ -0.82
RIF1-211ENST00000494333 SSC5DA1L4H1 1573 aa9.93□□□□□ -0.82
RIF1-211ENST00000494333 SALL1Q9NSC2 1324 aa9.93□□□□□ -0.82
RIF1-211ENST00000494333 MANSC4A6NHS7 340 aaPredicted RBP9.93□□□□□ -0.82
RIF1-211ENST00000494333 SURF6O75683 361 aaKnown RBP9.93□□□□□ -0.82
RIF1-211ENST00000494333 ZBTB48P10074 688 aaPredicted RBP9.93□□□□□ -0.82
RIF1-211ENST00000494333 OS9Q13438 667 aaPredicted RBP9.93□□□□□ -0.82
RIF1-211ENST00000494333 FKBP1CQ5VVH2 108 aa9.93□□□□□ -0.82
RIF1-211ENST00000494333 CDC42EP5Q6NZY7 148 aa9.93□□□□□ -0.82
RIF1-211ENST00000494333 FAM83AQ86UY5 434 aa9.93□□□□□ -0.82
RIF1-211ENST00000494333 FAM35AQ86V20 835 aa9.93□□□□□ -0.82
RIF1-211ENST00000494333 ZGPATQ8N5A5 531 aaKnown RBP9.93□□□□□ -0.82
RIF1-211ENST00000494333 SSH3Q8TE77 659 aa9.93□□□□□ -0.82
RIF1-211ENST00000494333 SNX29Q8TEQ0 813 aa9.93□□□□□ -0.82
RIF1-211ENST00000494333 WNK4Q96J92 1243 aa9.93□□□□□ -0.82
RIF1-211ENST00000494333 CHRDQ9H2X0 955 aa9.93□□□□□ -0.82
RIF1-211ENST00000494333 USP40Q9NVE5 1235 aa9.93□□□□□ -0.82
RIF1-211ENST00000494333 NAGPAQ9UK23 515 aa9.93□□□□□ -0.82
RIF1-211ENST00000494333 DAGLAQ9Y4D2 1042 aa9.93□□□□□ -0.82
RIF1-211ENST00000494333 CCDC85CA6NKD9 419 aa9.92□□□□□ -0.82
RIF1-211ENST00000494333 PHF20L1A8MW92 1017 aa9.92□□□□□ -0.82
RIF1-211ENST00000494333 J3QW42 95 aa9.92□□□□□ -0.82
RIF1-211ENST00000494333 PHACTR2O75167 634 aa9.92□□□□□ -0.82
RIF1-211ENST00000494333 CPB1P15086 417 aa9.92□□□□□ -0.82
RIF1-211ENST00000494333 TCP10Q12799 353 aa9.92□□□□□ -0.82
RIF1-211ENST00000494333 SPTY2D1Q68D10 685 aaPredicted RBP9.92□□□□□ -0.82
RIF1-211ENST00000494333 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.92□□□□□ -0.82
RIF1-211ENST00000494333 PANK1Q8TE04 598 aa9.92□□□□□ -0.82
RIF1-211ENST00000494333 OPTNQ96CV9 577 aa9.92□□□□□ -0.82
RIF1-211ENST00000494333 NIF3L1Q9GZT8 377 aa9.92□□□□□ -0.82
RIF1-211ENST00000494333 KANSL3Q9P2N6 904 aa9.92□□□□□ -0.82
RIF1-211ENST00000494333 CES1P23141 567 aa9.91□□□□□ -0.82
RIF1-211ENST00000494333 NFIAQ12857 509 aa9.91□□□□□ -0.82
RIF1-211ENST00000494333 VGLL4Q14135 290 aa9.91□□□□□ -0.82
RIF1-211ENST00000494333 MIGA2Q7L4E1 593 aa9.91□□□□□ -0.82
RIF1-211ENST00000494333 DZIP1Q86YF9 867 aaKnown RBP9.91□□□□□ -0.82
RIF1-211ENST00000494333 ZSCAN29Q8IWY8 852 aaPredicted RBP9.91□□□□□ -0.82
RIF1-211ENST00000494333 SPATA5Q8NB90 893 aa9.91□□□□□ -0.82
RIF1-211ENST00000494333 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.91□□□□□ -0.82
RIF1-211ENST00000494333 ZNF296Q8WUU4 475 aaPredicted RBP9.91□□□□□ -0.82
RIF1-211ENST00000494333 FAM151AQ8WW52 585 aa9.91□□□□□ -0.82
RIF1-211ENST00000494333 HOOK2Q96ED9 719 aa9.91□□□□□ -0.82
RIF1-211ENST00000494333 ASB16Q96NS5 453 aa9.91□□□□□ -0.82
RIF1-211ENST00000494333 R3HDMLQ9H3Y0 253 aa9.91□□□□□ -0.82
RIF1-211ENST00000494333 ZFYVE28Q9HCC9 887 aa9.91□□□□□ -0.82
RIF1-211ENST00000494333 HMG20BQ9P0W2 317 aa9.91□□□□□ -0.82
RIF1-211ENST00000494333 CSADQ9Y600 493 aa9.91□□□□□ -0.82
RIF1-211ENST00000494333 PDS5AQ29RF7 1337 aaKnown RBP9.9□□□□□ -0.82
RIF1-211ENST00000494333 IGF2BP3O00425 579 aaKnown RBP eCLIP9.9□□□□□ -0.82
RIF1-211ENST00000494333 EREGO14944 169 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 ALBP02768 609 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 HOXB4P17483 251 aaPredicted RBP9.9□□□□□ -0.82
RIF1-211ENST00000494333 MECOMQ03112 1051 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 HYAL2Q12891 473 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 ORC1Q13415 861 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 TNNI3KQ59H18 835 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 CCDC158Q5M9N0 1113 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 PERM1Q5SV97 790 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 DCAF15Q66K64 600 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 OTUD7BQ6GQQ9 843 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 KANK3Q6NY19 840 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 PI16Q6UXB8 463 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 ZKSCAN4Q969J2 545 aaPredicted RBP9.9□□□□□ -0.82
RIF1-211ENST00000494333 PMEPA1Q969W9 287 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 ALKBH8Q96BT7 664 aaKnown RBP9.9□□□□□ -0.82
RIF1-211ENST00000494333 WRNIP1Q96S55 665 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 GPR108Q9NPR9 543 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 NOP58Q9Y2X3 529 aaKnown RBP9.9□□□□□ -0.82
RIF1-211ENST00000494333 FPGT-TNNI3KV9GXZ4 949 aa9.9□□□□□ -0.82
RIF1-211ENST00000494333 TREHO43280 583 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 UQCRFS1P1P0C7P4 283 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 MCAMP43121 646 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 DSC3Q14574 896 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 TTC39AQ5SRH9 613 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 PSAPL1Q6NUJ1 521 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 CEP85Q6P2H3 762 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms