RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 ADAMTS4O75173 837 aa25.43■■□□□ 1.66
HPS3-207ENST00000494327 REC8O95072 547 aa25.43■■□□□ 1.66
HPS3-207ENST00000494327 TNFAIP2Q03169 654 aa25.43■■□□□ 1.66
HPS3-207ENST00000494327 DHX32Q7L7V1 743 aaKnown RBP25.43■■□□□ 1.66
HPS3-207ENST00000494327 MAP3K14Q99558 947 aa25.43■■□□□ 1.66
HPS3-207ENST00000494327 SLC12A7Q9Y666 1083 aa25.43■■□□□ 1.66
HPS3-207ENST00000494327 CFBP00751 764 aa25.42■■□□□ 1.66
HPS3-207ENST00000494327 C6orf222P0C671 652 aaPredicted RBP25.42■■□□□ 1.66
HPS3-207ENST00000494327 IRX5P78411 483 aaPredicted RBP25.42■■□□□ 1.66
HPS3-207ENST00000494327 PDE4DQ08499 809 aa25.42■■□□□ 1.66
HPS3-207ENST00000494327 MORC4Q8TE76 937 aa25.42■■□□□ 1.66
HPS3-207ENST00000494327 MPHOSPH6Q99547 160 aaKnown RBP25.42■■□□□ 1.66
HPS3-207ENST00000494327 SPC25Q9HBM1 224 aa25.42■■□□□ 1.66
HPS3-207ENST00000494327 CALM1P0DP23 149 aa25.41■■□□□ 1.66
HPS3-207ENST00000494327 CALM2P0DP24 149 aa25.41■■□□□ 1.66
HPS3-207ENST00000494327 CALM3P0DP25 149 aa25.41■■□□□ 1.66
HPS3-207ENST00000494327 SYN1P17600 705 aa25.41■■□□□ 1.66
HPS3-207ENST00000494327 HSPA4P34932 840 aa25.41■■□□□ 1.66
HPS3-207ENST00000494327 EXOSC10Q01780 885 aaKnown RBP25.41■■□□□ 1.66
HPS3-207ENST00000494327 TAPT1Q6NXT6 567 aa25.41■■□□□ 1.66
HPS3-207ENST00000494327 SLC39A5Q6ZMH5 540 aa25.41■■□□□ 1.66
HPS3-207ENST00000494327 SYNE3Q6ZMZ3 975 aa25.41■■□□□ 1.66
HPS3-207ENST00000494327 DNERQ8NFT8 737 aa25.41■■□□□ 1.66
HPS3-207ENST00000494327 SYTL5Q8TDW5 730 aaPredicted RBP25.41■■□□□ 1.66
HPS3-207ENST00000494327 TAAR1Q96RJ0 339 aa25.41■■□□□ 1.66
HPS3-207ENST00000494327 VTA1Q9NP79 307 aa25.41■■□□□ 1.66
HPS3-207ENST00000494327 MCM3APO60318 1980 aa25.4■■□□□ 1.66
HPS3-207ENST00000494327 PNMA6FA0A0J9YX94 578 aa25.4■■□□□ 1.66
HPS3-207ENST00000494327 MYADML2A6NDP7 307 aa25.4■■□□□ 1.66
HPS3-207ENST00000494327 KCNA10Q16322 511 aa25.4■■□□□ 1.66
HPS3-207ENST00000494327 IQSEC1Q6DN90 963 aa25.4■■□□□ 1.66
HPS3-207ENST00000494327 CHRDL2Q6WN34 429 aa25.4■■□□□ 1.66
HPS3-207ENST00000494327 CMTR1Q8N1G2 835 aaKnown RBP25.4■■□□□ 1.66
HPS3-207ENST00000494327 COL20A1Q9P218 1284 aa25.4■■□□□ 1.66
HPS3-207ENST00000494327 PHF24Q9UPV7 400 aa25.4■■□□□ 1.66
HPS3-207ENST00000494327 COLQQ9Y215 455 aaPredicted RBP25.4■■□□□ 1.66
HPS3-207ENST00000494327 ATP11BQ9Y2G3 1177 aa25.4■■□□□ 1.66
HPS3-207ENST00000494327 LOC102724159A0A0B4J2E5 919 aa25.39■■□□□ 1.66
HPS3-207ENST00000494327 B4DLN1 442 aa25.39■■□□□ 1.66
HPS3-207ENST00000494327 PLEKHA8P1O95397 391 aa25.39■■□□□ 1.66
HPS3-207ENST00000494327 CPA1P15085 419 aa25.39■■□□□ 1.66
HPS3-207ENST00000494327 SMPD1P17405 629 aa25.39■■□□□ 1.66
HPS3-207ENST00000494327 GNAQP50148 359 aa25.39■■□□□ 1.66
HPS3-207ENST00000494327 MRPL12P52815 198 aaKnown RBP25.39■■□□□ 1.66
HPS3-207ENST00000494327 RTP1P59025 263 aa25.39■■□□□ 1.66
HPS3-207ENST00000494327 TRAF1Q13077 416 aa25.39■■□□□ 1.66
HPS3-207ENST00000494327 PWP2Q15269 919 aaKnown RBP25.39■■□□□ 1.66
HPS3-207ENST00000494327 GNASQ5JWF2 1037 aa25.39■■□□□ 1.66
HPS3-207ENST00000494327 MICU3Q86XE3 530 aa25.39■■□□□ 1.66
HPS3-207ENST00000494327 KLHDC9Q8NEP7 349 aa25.39■■□□□ 1.66
HPS3-207ENST00000494327 JAKMIP1Q96N16 626 aaKnown RBP25.39■■□□□ 1.66
HPS3-207ENST00000494327 LZTS2Q9BRK4 669 aa25.39■■□□□ 1.66
HPS3-207ENST00000494327 SNX14Q9Y5W7 946 aa25.39■■□□□ 1.66
HPS3-207ENST00000494327 DYNC1LI2O43237 492 aaPredicted RBP25.38■■□□□ 1.65
HPS3-207ENST00000494327 HMGB1P09429 215 aaKnown RBP25.38■■□□□ 1.65
HPS3-207ENST00000494327 PTGS1P23219 599 aa25.38■■□□□ 1.65
HPS3-207ENST00000494327 ACLYP53396 1101 aa25.38■■□□□ 1.65
HPS3-207ENST00000494327 GJA9P57773 515 aa25.38■■□□□ 1.65
HPS3-207ENST00000494327 FGD1P98174 961 aa25.38■■□□□ 1.65
HPS3-207ENST00000494327 TMEM63BQ5T3F8 832 aa25.38■■□□□ 1.65
HPS3-207ENST00000494327 SGMS1Q86VZ5 419 aa25.38■■□□□ 1.65
HPS3-207ENST00000494327 CCDC82Q8N4S0 544 aa25.38■■□□□ 1.65
HPS3-207ENST00000494327 SRBD1Q8N5C6 995 aaKnown RBP25.38■■□□□ 1.65
HPS3-207ENST00000494327 FANCBQ8NB91 859 aa25.38■■□□□ 1.65
HPS3-207ENST00000494327 KCNB2Q92953 911 aa25.38■■□□□ 1.65
HPS3-207ENST00000494327 RRP36Q96EU6 259 aaKnown RBP25.38■■□□□ 1.65
HPS3-207ENST00000494327 TSEN34Q9BSV6 310 aaKnown RBP25.38■■□□□ 1.65
HPS3-207ENST00000494327 SPZ1Q9BXG8 430 aa25.38■■□□□ 1.65
HPS3-207ENST00000494327 MAF1Q9H063 256 aa25.38■■□□□ 1.65
HPS3-207ENST00000494327 LCTP09848 1927 aa25.37■■□□□ 1.65
HPS3-207ENST00000494327 ALPK3Q96L96 1907 aa25.37■■□□□ 1.65
HPS3-207ENST00000494327 A0A1W2PQ45 241 aaPredicted RBP25.37■■□□□ 1.65
HPS3-207ENST00000494327 A0A1W2PQY0 241 aa25.37■■□□□ 1.65
HPS3-207ENST00000494327 OPLAHO14841 1288 aa25.37■■□□□ 1.65
HPS3-207ENST00000494327 BEX3Q00994 111 aa25.37■■□□□ 1.65
HPS3-207ENST00000494327 TLK2Q86UE8 772 aa25.37■■□□□ 1.65
HPS3-207ENST00000494327 NSUN6Q8TEA1 469 aaKnown RBP25.37■■□□□ 1.65
HPS3-207ENST00000494327 RMDN3Q96TC7 470 aa25.37■■□□□ 1.65
HPS3-207ENST00000494327 WDR11Q9BZH6 1224 aa25.37■■□□□ 1.65
HPS3-207ENST00000494327 AP5M1Q9H0R1 490 aa25.37■■□□□ 1.65
HPS3-207ENST00000494327 UPF3AQ9H1J1 476 aaKnown RBP25.37■■□□□ 1.65
HPS3-207ENST00000494327 PCDH10Q9P2E7 1040 aa25.37■■□□□ 1.65
HPS3-207ENST00000494327 GNEQ9Y223 722 aaKnown RBP25.37■■□□□ 1.65
HPS3-207ENST00000494327 EDNRBP24530 442 aa25.36■■□□□ 1.65
HPS3-207ENST00000494327 HOXA13P31271 388 aaPredicted RBP25.36■■□□□ 1.65
HPS3-207ENST00000494327 ARHGEF16Q5VV41 709 aa25.36■■□□□ 1.65
HPS3-207ENST00000494327 PCSK9Q8NBP7 692 aaKnown RBP25.36■■□□□ 1.65
HPS3-207ENST00000494327 VTI1AQ96AJ9 217 aa25.36■■□□□ 1.65
HPS3-207ENST00000494327 SEC63Q9UGP8 760 aaKnown RBP25.36■■□□□ 1.65
HPS3-207ENST00000494327 BRPF3Q9ULD4 1205 aa25.36■■□□□ 1.65
HPS3-207ENST00000494327 NAP1L2Q9ULW6 460 aaPredicted RBP25.36■■□□□ 1.65
HPS3-207ENST00000494327 MOXD2PA6NHM9 499 aa25.35■■□□□ 1.65
HPS3-207ENST00000494327 ASGR1P07306 291 aa25.35■■□□□ 1.65
HPS3-207ENST00000494327 EIF2AK2P19525 551 aaKnown RBP25.35■■□□□ 1.65
HPS3-207ENST00000494327 SMARCA1P28370 1054 aa25.35■■□□□ 1.65
HPS3-207ENST00000494327 HSD17B4P51659 736 aa25.35■■□□□ 1.65
HPS3-207ENST00000494327 TRIM60Q495X7 471 aa25.35■■□□□ 1.65
HPS3-207ENST00000494327 CCSAPQ6IQ19 270 aaPredicted RBP25.35■■□□□ 1.65
HPS3-207ENST00000494327 APOA5Q6Q788 366 aa25.35■■□□□ 1.65
HPS3-207ENST00000494327 BLOC1S2Q6QNY1 142 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms