RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 CACNB2Q08289 660 aaPredicted RBP14.39□□□□□ -0.11
TRA2A-209ENST00000494255 TRIM32Q13049 653 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 TRIM22Q8IYM9 498 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 ZNF713Q8N859 430 aaPredicted RBP14.39□□□□□ -0.11
TRA2A-209ENST00000494255 TINF2Q9BSI4 451 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 HMX1Q9NP08 348 aaPredicted RBP14.39□□□□□ -0.11
TRA2A-209ENST00000494255 MAP3K20Q9NYL2 800 aaKnown RBP14.39□□□□□ -0.11
TRA2A-209ENST00000494255 ASB14A6NK59 587 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 B4DLN1 442 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 PRPF3O43395 683 aaKnown RBP14.39□□□□□ -0.11
TRA2A-209ENST00000494255 ST18O60284 1047 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 PFKFB2O60825 505 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 CDKL5O76039 1030 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 CCL5P13501 91 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 MRPL12P52815 198 aaKnown RBP14.39□□□□□ -0.11
TRA2A-209ENST00000494255 MTFR1Q15390 333 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 GPKOWQ92917 476 aaPredicted RBP eCLIP14.39□□□□□ -0.114e-7■□□□□ 8.6
TRA2A-209ENST00000494255 MPHOSPH6Q99547 160 aaKnown RBP14.39□□□□□ -0.11
TRA2A-209ENST00000494255 SLC26A6Q9BXS9 759 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 RNF26Q9BY78 433 aaPredicted RBP14.39□□□□□ -0.11
TRA2A-209ENST00000494255 RNF208Q9H0X6 261 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 CNPY2Q9Y2B0 182 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 SYNGAP1Q96PV0 1343 aa14.39□□□□□ -0.11
TRA2A-209ENST00000494255 SOWAHBA6NEL2 793 aa14.38□□□□□ -0.11
TRA2A-209ENST00000494255 GCOM1H8Y6P7 765 aaPredicted RBP14.38□□□□□ -0.11
TRA2A-209ENST00000494255 POLR2MP0CAP2 368 aa14.38□□□□□ -0.11
TRA2A-209ENST00000494255 SSRP1Q08945 709 aaKnown RBP14.38□□□□□ -0.11
TRA2A-209ENST00000494255 NTRK3Q16288 839 aa14.38□□□□□ -0.11
TRA2A-209ENST00000494255 MAP3K21Q5TCX8 1036 aa14.38□□□□□ -0.11
TRA2A-209ENST00000494255 MAMDC4Q6UXC1 1216 aa14.38□□□□□ -0.11
TRA2A-209ENST00000494255 TBC1D5Q92609 795 aa14.38□□□□□ -0.11
TRA2A-209ENST00000494255 CUL5Q93034 780 aa14.38□□□□□ -0.11
TRA2A-209ENST00000494255 PHKBQ93100 1093 aa14.38□□□□□ -0.11
TRA2A-209ENST00000494255 FGD4Q96M96 766 aa14.38□□□□□ -0.11
TRA2A-209ENST00000494255 UNC93B1Q9H1C4 597 aa14.38□□□□□ -0.11
TRA2A-209ENST00000494255 LIMCH1Q9UPQ0 1083 aa14.38□□□□□ -0.11
TRA2A-209ENST00000494255 RPTORQ8N122 1335 aa14.38□□□□□ -0.11
TRA2A-209ENST00000494255 LOC102724159A0A0B4J2E5 919 aa14.37□□□□□ -0.11
TRA2A-209ENST00000494255 OPLAHO14841 1288 aa14.37□□□□□ -0.11
TRA2A-209ENST00000494255 SCG2P13521 617 aa14.37□□□□□ -0.11
TRA2A-209ENST00000494255 HSD17B4P51659 736 aa14.37□□□□□ -0.11
TRA2A-209ENST00000494255 NAPAP54920 295 aa14.37□□□□□ -0.11
TRA2A-209ENST00000494255 SCRN1Q12765 414 aa14.37□□□□□ -0.11
TRA2A-209ENST00000494255 PWP2Q15269 919 aaKnown RBP14.37□□□□□ -0.11
TRA2A-209ENST00000494255 ME3Q16798 604 aa14.37□□□□□ -0.11
TRA2A-209ENST00000494255 PFKFB3Q16875 520 aaPredicted RBP14.37□□□□□ -0.11
TRA2A-209ENST00000494255 WWC2Q6AWC2 1192 aa14.37□□□□□ -0.11
TRA2A-209ENST00000494255 ARMCX2Q7L311 632 aa14.37□□□□□ -0.11
TRA2A-209ENST00000494255 DNERQ8NFT8 737 aa14.37□□□□□ -0.11
TRA2A-209ENST00000494255 SYTL5Q8TDW5 730 aaPredicted RBP14.37□□□□□ -0.11
TRA2A-209ENST00000494255 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.37□□□□□ -0.113e-9■■□□□ 13.6
TRA2A-209ENST00000494255 NRBP1Q9UHY1 535 aa14.37□□□□□ -0.11
TRA2A-209ENST00000494255 LCTP09848 1927 aa14.37□□□□□ -0.11
TRA2A-209ENST00000494255 IGHA2P01877 340 aa14.36□□□□□ -0.11
TRA2A-209ENST00000494255 CNGA1P29973 690 aa14.36□□□□□ -0.11
TRA2A-209ENST00000494255 HOXA13P31271 388 aaPredicted RBP14.36□□□□□ -0.11
TRA2A-209ENST00000494255 ALDH5A1P51649 535 aaPredicted RBP14.36□□□□□ -0.11
TRA2A-209ENST00000494255 GHRHRQ02643 423 aa14.36□□□□□ -0.11
TRA2A-209ENST00000494255 PPP1R18Q6NYC8 613 aa14.36□□□□□ -0.11
TRA2A-209ENST00000494255 ZSCAN31Q96LW9 406 aaPredicted RBP14.36□□□□□ -0.11
TRA2A-209ENST00000494255 PURBQ96QR8 312 aaKnown RBP14.36□□□□□ -0.11
TRA2A-209ENST00000494255 PSTPIP2Q9H939 334 aa14.36□□□□□ -0.11
TRA2A-209ENST00000494255 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.36□□□□□ -0.11
TRA2A-209ENST00000494255 PPFIA3O75145 1194 aa14.36□□□□□ -0.11
TRA2A-209ENST00000494255 CYBAP13498 195 aa14.36□□□□□ -0.11
TRA2A-209ENST00000494255 NECAB1Q8N987 351 aa14.36□□□□□ -0.11
TRA2A-209ENST00000494255 SMARCC2Q8TAQ2 1214 aa14.36□□□□□ -0.11
TRA2A-209ENST00000494255 NSUN6Q8TEA1 469 aaKnown RBP14.36□□□□□ -0.11
TRA2A-209ENST00000494255 CCDC12Q8WUD4 166 aaPredicted RBP14.36□□□□□ -0.11
TRA2A-209ENST00000494255 GTF3C6Q969F1 213 aa14.36□□□□□ -0.11
TRA2A-209ENST00000494255 BARHL2Q9NY43 387 aa14.36□□□□□ -0.11
TRA2A-209ENST00000494255 MCM3APO60318 1980 aa14.35□□□□□ -0.11
TRA2A-209ENST00000494255 ASTN1O14525 1302 aa14.35□□□□□ -0.11
TRA2A-209ENST00000494255 STXBP3O00186 592 aa14.35□□□□□ -0.11
TRA2A-209ENST00000494255 LARGE1O95461 756 aa14.35□□□□□ -0.11
TRA2A-209ENST00000494255 SNAI1O95863 264 aaPredicted RBP14.35□□□□□ -0.11
TRA2A-209ENST00000494255 GJB1P08034 283 aa14.35□□□□□ -0.11
TRA2A-209ENST00000494255 CCND3P30281 292 aaPredicted RBP14.35□□□□□ -0.11
TRA2A-209ENST00000494255 PDE4DQ08499 809 aa14.35□□□□□ -0.11
TRA2A-209ENST00000494255 PRAMEF19Q5SWL8 479 aa14.35□□□□□ -0.11
TRA2A-209ENST00000494255 ARHGEF16Q5VV41 709 aa14.35□□□□□ -0.11
TRA2A-209ENST00000494255 FCHSD1Q86WN1 690 aa14.35□□□□□ -0.11
TRA2A-209ENST00000494255 TAAR1Q96RJ0 339 aa14.35□□□□□ -0.11
TRA2A-209ENST00000494255 RMDN3Q96TC7 470 aa14.35□□□□□ -0.11
TRA2A-209ENST00000494255 GLT8D2Q9H1C3 349 aa14.35□□□□□ -0.11
TRA2A-209ENST00000494255 ABHD16BQ9H3Z7 469 aa14.35□□□□□ -0.11
TRA2A-209ENST00000494255 PAK6Q9NQU5 681 aaPredicted RBP14.35□□□□□ -0.11
TRA2A-209ENST00000494255 SH2B1Q9NRF2 756 aaPredicted RBP14.35□□□□□ -0.11
TRA2A-209ENST00000494255 ZHX1Q9UKY1 873 aaPredicted RBP14.35□□□□□ -0.11
TRA2A-209ENST00000494255 MSCO60682 206 aa14.34□□□□□ -0.11
TRA2A-209ENST00000494255 DEXIO95424 95 aa14.34□□□□□ -0.11
TRA2A-209ENST00000494255 ADCY7P51828 1080 aa14.34□□□□□ -0.11
TRA2A-209ENST00000494255 SOX10P56693 466 aa14.34□□□□□ -0.11
TRA2A-209ENST00000494255 ACVR2BQ13705 512 aa14.34□□□□□ -0.11
TRA2A-209ENST00000494255 PKN1Q16512 942 aa14.34□□□□□ -0.11
TRA2A-209ENST00000494255 TEX2Q8IWB9 1127 aa14.34□□□□□ -0.11
TRA2A-209ENST00000494255 TRPV1Q8NER1 839 aa14.34□□□□□ -0.11
TRA2A-209ENST00000494255 CCDC148Q8NFR7 591 aa14.34□□□□□ -0.11
TRA2A-209ENST00000494255 DEFB118Q96PH6 123 aa14.34□□□□□ -0.11
TRA2A-209ENST00000494255 COL20A1Q9P218 1284 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms