RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ZNF341Q9BYN7 854 aa3.88□□□□□ -1.79
PTPN12-212ENST00000494248 DEF6Q9H4E7 631 aa3.88□□□□□ -1.79
PTPN12-212ENST00000494248 AK5Q9Y6K8 562 aa3.88□□□□□ -1.79
PTPN12-212ENST00000494248 NPEPPSL1A6NEC2 478 aa3.87□□□□□ -1.79
PTPN12-212ENST00000494248 PATE3B3GLJ2 98 aa3.87□□□□□ -1.79
PTPN12-212ENST00000494248 DDX3XO00571 662 aaKnown RBP eCLIP3.87□□□□□ -1.79
PTPN12-212ENST00000494248 SMARCA5O60264 1052 aaPredicted RBP3.87□□□□□ -1.79
PTPN12-212ENST00000494248 PPP1R11O60927 126 aaPredicted RBP3.87□□□□□ -1.79
PTPN12-212ENST00000494248 ST13P50502 369 aaKnown RBP3.87□□□□□ -1.79
PTPN12-212ENST00000494248 REC114Q7Z4M0 266 aa3.87□□□□□ -1.79
PTPN12-212ENST00000494248 C14orf37Q86TY3 774 aa3.87□□□□□ -1.79
PTPN12-212ENST00000494248 NAT16Q8N8M0 369 aa3.87□□□□□ -1.79
PTPN12-212ENST00000494248 NLGN2Q8NFZ4 835 aa3.87□□□□□ -1.79
PTPN12-212ENST00000494248 MBD6Q96DN6 1003 aa3.87□□□□□ -1.79
PTPN12-212ENST00000494248 RHOVQ96L33 236 aa3.87□□□□□ -1.79
PTPN12-212ENST00000494248 SRRTQ9BXP5 876 aaKnown RBP3.87□□□□□ -1.79
PTPN12-212ENST00000494248 TESMINQ9Y4I5 508 aa3.87□□□□□ -1.79
PTPN12-212ENST00000494248 H0Y8X5 98 aa3.86□□□□□ -1.79
PTPN12-212ENST00000494248 SHOXO15266 292 aa3.86□□□□□ -1.79
PTPN12-212ENST00000494248 CLEC3AO75596 197 aa3.86□□□□□ -1.79
PTPN12-212ENST00000494248 SELENOPP49908 381 aa3.86□□□□□ -1.79
PTPN12-212ENST00000494248 FOXE3Q13461 319 aa3.86□□□□□ -1.79
PTPN12-212ENST00000494248 OVOS1Q6IE37 1185 aa3.86□□□□□ -1.79
PTPN12-212ENST00000494248 CIR1Q86X95 450 aaPredicted RBP3.86□□□□□ -1.79
PTPN12-212ENST00000494248 AEBP1Q8IUX7 1158 aa3.86□□□□□ -1.79
PTPN12-212ENST00000494248 FAM26EQ8N5C1 309 aa3.86□□□□□ -1.79
PTPN12-212ENST00000494248 Q8TCH9 128 aa3.86□□□□□ -1.79
PTPN12-212ENST00000494248 CNNM2Q9H8M5 875 aa3.86□□□□□ -1.79
PTPN12-212ENST00000494248 FBXL21Q9UKT6 434 aa3.86□□□□□ -1.79
PTPN12-212ENST00000494248 PCDHB12Q9Y5F1 795 aa3.86□□□□□ -1.79
PTPN12-212ENST00000494248 WDR33Q9C0J8 1336 aaKnown RBP3.86□□□□□ -1.79
PTPN12-212ENST00000494248 MUSKO15146 869 aa3.85□□□□□ -1.79
PTPN12-212ENST00000494248 GSNP06396 782 aa3.85□□□□□ -1.79
PTPN12-212ENST00000494248 GARTP22102 1010 aa3.85□□□□□ -1.79
PTPN12-212ENST00000494248 CORO7P57737 925 aa3.85□□□□□ -1.79
PTPN12-212ENST00000494248 FAM160A1Q05DH4 1040 aa3.85□□□□□ -1.79
PTPN12-212ENST00000494248 AUHQ13825 339 aaKnown RBP3.85□□□□□ -1.79
PTPN12-212ENST00000494248 MIIPQ5JXC2 388 aa3.85□□□□□ -1.79
PTPN12-212ENST00000494248 FAM124AQ86V42 546 aa3.85□□□□□ -1.79
PTPN12-212ENST00000494248 ATG4CQ96DT6 458 aa3.85□□□□□ -1.79
PTPN12-212ENST00000494248 ZNF503Q96F45 646 aa3.85□□□□□ -1.79
PTPN12-212ENST00000494248 LCORQ96JN0 433 aaPredicted RBP3.85□□□□□ -1.79
PTPN12-212ENST00000494248 GMIPQ9P107 970 aa3.85□□□□□ -1.79
PTPN12-212ENST00000494248 NARSO43776 548 aaKnown RBP3.84□□□□□ -1.79
PTPN12-212ENST00000494248 ZNF623O75123 536 aa3.84□□□□□ -1.79
PTPN12-212ENST00000494248 CYP2C8P10632 490 aa3.84□□□□□ -1.79
PTPN12-212ENST00000494248 KRTAP10-11P60412 298 aa3.84□□□□□ -1.79
PTPN12-212ENST00000494248 PURAQ00577 322 aaKnown RBP3.84□□□□□ -1.79
PTPN12-212ENST00000494248 DPTQ07507 201 aa3.84□□□□□ -1.79
PTPN12-212ENST00000494248 KYQ8NBH2 561 aa3.84□□□□□ -1.79
PTPN12-212ENST00000494248 PTCHD1Q96NR3 888 aa3.84□□□□□ -1.79
PTPN12-212ENST00000494248 FCRL3Q96P31 734 aaPredicted RBP3.84□□□□□ -1.79
PTPN12-212ENST00000494248 MKRN2Q9H000 416 aaKnown RBP3.84□□□□□ -1.79
PTPN12-212ENST00000494248 SIT1Q9Y3P8 196 aa3.84□□□□□ -1.79
PTPN12-212ENST00000494248 PLSCR1O15162 318 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 TLR3O15455 904 aaKnown RBP3.83□□□□□ -1.8
PTPN12-212ENST00000494248 L1CAMP32004 1257 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 EPHB4P54760 987 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 RAD51AP2Q09MP3 1159 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 TRIM26Q12899 539 aaPredicted RBP3.83□□□□□ -1.8
PTPN12-212ENST00000494248 MPP2Q14168 576 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 SURF1Q15526 300 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 TAF1CQ15572 869 aaPredicted RBP3.83□□□□□ -1.8
PTPN12-212ENST00000494248 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 CYP2R1Q6VVX0 501 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 USP48Q86UV5 1035 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 SLC6A18Q96N87 628 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 ARID3AQ99856 593 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 TRIM8Q9BZR9 551 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 MEGF9Q9H1U4 602 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 BRMS1Q9HCU9 246 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 RWDD3Q9Y3V2 267 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 TCAF1Q9Y4C2 921 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 PCDHB14Q9Y5E9 798 aa3.83□□□□□ -1.8
PTPN12-212ENST00000494248 TTBK1Q5TCY1 1321 aaPredicted RBP3.83□□□□□ -1.8
PTPN12-212ENST00000494248 USP31Q70CQ4 1352 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 C9IYK1 514 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 ATE1O95260 518 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 CTSHP09668 335 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 IFNGR1P15260 489 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 ITGB6P18564 788 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 IL12RB1P42701 662 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 ITGA1P56199 1179 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 PPP2CBP62714 309 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 PPP2CAP67775 309 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 DGCR2P98153 550 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 SLC9A5Q14940 896 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 GOLM1Q8NBJ4 401 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 USP33Q8TEY7 942 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 PEX11GQ96HA9 241 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 DUSP9Q99956 384 aaKnown RBP3.82□□□□□ -1.8
PTPN12-212ENST00000494248 MTA3Q9BTC8 594 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 PRR13Q9NZ81 148 aa3.82□□□□□ -1.8
PTPN12-212ENST00000494248 ZFR2Q9UPR6 939 aaKnown RBP3.82□□□□□ -1.8
PTPN12-212ENST00000494248 C9orf118A6NHY6 69 aa3.81□□□□□ -1.8
PTPN12-212ENST00000494248 ZNF202O95125 648 aa3.81□□□□□ -1.8
PTPN12-212ENST00000494248 ZNF28P17035 718 aa3.81□□□□□ -1.8
PTPN12-212ENST00000494248 ABHD18Q0P651 414 aa3.81□□□□□ -1.8
PTPN12-212ENST00000494248 PKN3Q6P5Z2 889 aa3.81□□□□□ -1.8
PTPN12-212ENST00000494248 RNF207Q6ZRF8 634 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms