RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CAPS2Q9BXY5 557 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 VCXQ9H320 206 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 HOMER3Q9NSC5 361 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 ZNF804BA4D1E1 1349 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 RESTQ13127 1097 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 MMP1P03956 469 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 IL6STP40189 918 aaPredicted RBP20.96■□□□□ 0.95
COL27A1-207ENST00000494090 PI4K2BQ8TCG2 481 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 DMP1Q13316 513 aaPredicted RBP20.96■□□□□ 0.95
COL27A1-207ENST00000494090 PPP2R5DQ14738 602 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 TSNAXIP1Q2TAA8 658 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 TRIM50Q86XT4 487 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 ARHGEF2Q92974 986 aaKnown RBP20.96■□□□□ 0.95
COL27A1-207ENST00000494090 CACYBPQ9HB71 228 aaKnown RBP20.96■□□□□ 0.95
COL27A1-207ENST00000494090 ST7Q9NRC1 585 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 BZW2Q9Y6E2 419 aaKnown RBP20.96■□□□□ 0.95
COL27A1-207ENST00000494090 SLFN14P0C7P3 912 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 STX2P32856 288 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 KRT81Q14533 505 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 NLRP1Q9C000 1473 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 SH2B2O14492 632 aaPredicted RBP20.96■□□□□ 0.95
COL27A1-207ENST00000494090 STAM2O75886 525 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 PDE6CP51160 858 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 ASPRV1Q53RT3 343 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 SLC35F6Q8N357 371 aa20.96■□□□□ 0.95
COL27A1-207ENST00000494090 KIF1BO60333 1816 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 RBL2Q08999 1139 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 ARHGEF6Q15052 776 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 ABCB5Q2M3G0 1257 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 RAB3IPQ96QF0 476 aaPredicted RBP20.95■□□□□ 0.94
COL27A1-207ENST00000494090 WDR70Q9NW82 654 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 SHROOM2Q13796 1616 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 PFDN6O15212 129 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 XPOTO43592 962 aaKnown RBP20.95■□□□□ 0.94
COL27A1-207ENST00000494090 TFDP1Q14186 410 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 PPP2R5AQ15172 486 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 LOC102724428A0A0B4J2F2 783 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 SIK1P57059 783 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 PTPN12Q05209 780 aaKnown RBP20.95■□□□□ 0.94
COL27A1-207ENST00000494090 MED10Q9BTT4 135 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 AMNQ9BXJ7 453 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 MAN1B1Q9UKM7 699 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 ABCC12Q96J65 1359 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 LARGE1O95461 756 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 MYL1P05976 194 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 CCNA1P78396 465 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 FAM47CQ5HY64 1035 aa20.95■□□□□ 0.94
COL27A1-207ENST00000494090 hCG_1984214I3L0E3 225 aa20.94■□□□□ 0.94
COL27A1-207ENST00000494090 BPIFB4P59827 614 aa20.94■□□□□ 0.94
COL27A1-207ENST00000494090 CUL4BQ13620 913 aa20.94■□□□□ 0.94
COL27A1-207ENST00000494090 ZNF658Q5TYW1 1059 aaPredicted RBP20.94■□□□□ 0.94
COL27A1-207ENST00000494090 KIAA0825Q8IV33 1275 aa20.94■□□□□ 0.94
COL27A1-207ENST00000494090 ZNF713Q8N859 430 aaPredicted RBP20.94■□□□□ 0.94
COL27A1-207ENST00000494090 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.94■□□□□ 0.949e-7■■□□□ 12
COL27A1-207ENST00000494090 CAPN9O14815 690 aa20.94■□□□□ 0.94
COL27A1-207ENST00000494090 HGSO14964 777 aaPredicted RBP20.94■□□□□ 0.94
COL27A1-207ENST00000494090 IFNAR1P17181 557 aa20.94■□□□□ 0.94
COL27A1-207ENST00000494090 ENOX1Q8TC92 643 aaKnown RBP20.94■□□□□ 0.94
COL27A1-207ENST00000494090 TMEM191BP0C7N4 346 aa20.94■□□□□ 0.94
COL27A1-207ENST00000494090 PPARDQ03181 441 aa20.94■□□□□ 0.94
COL27A1-207ENST00000494090 RASSF2P50749 326 aa20.94■□□□□ 0.94
COL27A1-207ENST00000494090 BBOF1Q8ND07 529 aa20.94■□□□□ 0.94
COL27A1-207ENST00000494090 LARP4BQ92615 738 aaKnown RBP20.94■□□□□ 0.94
COL27A1-207ENST00000494090 P2RX5Q93086 422 aa20.94■□□□□ 0.94
COL27A1-207ENST00000494090 TCP10L2B9ZVM9 353 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 EXOC3L4Q17RC7 722 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 ANKRD20A3Q5VUR7 823 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 OSBP2Q969R2 916 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 ABCD1P33897 745 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 ARMCX5Q6P1M9 558 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 ANKRD42Q8N9B4 389 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 NUF2Q9BZD4 464 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 FTOQ9C0B1 505 aaKnown RBP eCLIP20.93■□□□□ 0.948e-7■■■□□ 16.9
COL27A1-207ENST00000494090 USP14P54578 494 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 PDE11AQ9HCR9 933 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 TRPC5Q9UL62 973 aaPredicted RBP20.93■□□□□ 0.94
COL27A1-207ENST00000494090 CCPG1Q9ULG6 757 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 PRAMEF22A3QJZ6 481 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 MUM1L1Q5H9M0 696 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 GADL1Q6ZQY3 521 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 PALM2Q8IXS6 379 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 EPSTI1Q96J88 318 aa20.93■□□□□ 0.94
COL27A1-207ENST00000494090 FAM193BQ96PV7 902 aaPredicted RBP20.93■□□□□ 0.94
COL27A1-207ENST00000494090 CLNS1AP54105 237 aaKnown RBP20.92■□□□□ 0.94
COL27A1-207ENST00000494090 TYW1Q9NV66 732 aaKnown RBP20.92■□□□□ 0.94
COL27A1-207ENST00000494090 TMEM232C9JQI7 657 aa20.92■□□□□ 0.94
COL27A1-207ENST00000494090 HOXA7P31268 230 aaPredicted RBP20.92■□□□□ 0.94
COL27A1-207ENST00000494090 ADCY8P40145 1251 aa20.92■□□□□ 0.94
COL27A1-207ENST00000494090 NT5C2P49902 561 aa20.92■□□□□ 0.94
COL27A1-207ENST00000494090 EXOC8Q8IYI6 725 aa20.92■□□□□ 0.94
COL27A1-207ENST00000494090 RABGAP1Q9Y3P9 1069 aa20.92■□□□□ 0.94
COL27A1-207ENST00000494090 TTLL3Q9Y4R7 772 aa20.92■□□□□ 0.94
COL27A1-207ENST00000494090 SASH1O94885 1247 aa20.92■□□□□ 0.94
COL27A1-207ENST00000494090 POLGP54098 1239 aaPredicted RBP20.92■□□□□ 0.94
COL27A1-207ENST00000494090 MGARPQ8TDB4 240 aa20.92■□□□□ 0.94
COL27A1-207ENST00000494090 ATP6V0A1Q93050 837 aa20.92■□□□□ 0.94
COL27A1-207ENST00000494090 PUS7LQ9H0K6 701 aaKnown RBP20.92■□□□□ 0.94
COL27A1-207ENST00000494090 DPH5Q9H2P9 285 aa20.92■□□□□ 0.94
COL27A1-207ENST00000494090 PCDHA1Q9Y5I3 950 aa20.92■□□□□ 0.94
COL27A1-207ENST00000494090 RASSF7Q02833 373 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms