RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 PWP2Q15269 919 aaKnown RBP15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 SHHQ15465 462 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 SLC35G1Q2M3R5 365 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 ZNF697Q5TEC3 545 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 FAM109BQ6ICB4 259 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 SLC17A8Q8NDX2 589 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 TBC1D5Q92609 795 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 ZSCAN10Q96SZ4 725 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 KRT23Q9C075 422 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 KAT14Q9H8E8 782 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 SENP2Q9HC62 589 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 VTA1Q9NP79 307 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 Q9Y3F1 56 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 ARVCFO00192 962 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 CDK7P50613 346 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 ALDH5A1P51649 535 aaPredicted RBP15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 SEC23AQ15436 765 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 RNF207Q6ZRF8 634 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 KIAA1211Q6ZU35 1233 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 STOX1Q6ZVD7 989 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 TLK2Q86UE8 772 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 STAG2Q8N3U4 1231 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 SEZ6LQ9BYH1 1024 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 CNNM2Q9H8M5 875 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 MTMR10Q9NXD2 777 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 STXBP5LQ9Y2K9 1186 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 CDH23Q9H251 3354 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 GRIN2DO15399 1336 aa15.68■□□□□ 0.1
CTDSP1-212ENST00000494067 DYNC1LI2O43237 492 aaPredicted RBP15.67■□□□□ 0.1
CTDSP1-212ENST00000494067 CYP21A2P08686 494 aa15.67■□□□□ 0.1
CTDSP1-212ENST00000494067 CALML3P27482 149 aa15.67■□□□□ 0.1
CTDSP1-212ENST00000494067 USH1GQ495M9 461 aa15.67■□□□□ 0.1
CTDSP1-212ENST00000494067 ADGRF4Q8IZF3 695 aa15.67■□□□□ 0.1
CTDSP1-212ENST00000494067 RUFY2Q8WXA3 655 aa15.67■□□□□ 0.1
CTDSP1-212ENST00000494067 RNPC3Q96LT9 517 aaKnown RBP15.67■□□□□ 0.1
CTDSP1-212ENST00000494067 UBAC1Q9BSL1 405 aa15.67■□□□□ 0.1
CTDSP1-212ENST00000494067 COL20A1Q9P218 1284 aa15.67■□□□□ 0.1
CTDSP1-212ENST00000494067 WDR19Q8NEZ3 1342 aa15.67■□□□□ 0.1
CTDSP1-212ENST00000494067 TIMP1P01033 207 aa15.66■□□□□ 0.1
CTDSP1-212ENST00000494067 RPS6P62753 249 aaKnown RBP15.66■□□□□ 0.1
CTDSP1-212ENST00000494067 CDC37Q16543 378 aaPredicted RBP15.66■□□□□ 0.1
CTDSP1-212ENST00000494067 FSCN1Q16658 493 aaKnown RBP15.66■□□□□ 0.1
CTDSP1-212ENST00000494067 CXCL17Q6UXB2 119 aa15.66■□□□□ 0.1
CTDSP1-212ENST00000494067 TMEM199Q8N511 208 aa15.66■□□□□ 0.1
CTDSP1-212ENST00000494067 TBX21Q9UL17 535 aa15.66■□□□□ 0.1
CTDSP1-212ENST00000494067 RAD50Q92878 1312 aa15.66■□□□□ 0.1
CTDSP1-212ENST00000494067 OPLAHO14841 1288 aa15.65■□□□□ 0.1
CTDSP1-212ENST00000494067 SGSM2O43147 1006 aa15.65■□□□□ 0.1
CTDSP1-212ENST00000494067 DHX16O60231 1041 aaKnown RBP15.65■□□□□ 0.1
CTDSP1-212ENST00000494067 PPP1R11O60927 126 aaPredicted RBP15.65■□□□□ 0.1
CTDSP1-212ENST00000494067 EDNRBP24530 442 aa15.65■□□□□ 0.1
CTDSP1-212ENST00000494067 SMAD3P84022 425 aaKnown RBP15.65■□□□□ 0.1
CTDSP1-212ENST00000494067 PDE4DQ08499 809 aa15.65■□□□□ 0.1
CTDSP1-212ENST00000494067 TRDNQ13061 729 aa15.65■□□□□ 0.1
CTDSP1-212ENST00000494067 PPIGQ13427 754 aaKnown RBP eCLIP15.65■□□□□ 0.12e-10■■□□□ 14
CTDSP1-212ENST00000494067 BRDTQ58F21 947 aaPredicted RBP15.65■□□□□ 0.1
CTDSP1-212ENST00000494067 FAM126BQ8IXS8 530 aa15.65■□□□□ 0.1
CTDSP1-212ENST00000494067 DNERQ8NFT8 737 aa15.65■□□□□ 0.1
CTDSP1-212ENST00000494067 JMJD4Q9H9V9 463 aa15.65■□□□□ 0.1
CTDSP1-212ENST00000494067 GPHNQ9NQX3 736 aaPredicted RBP15.65■□□□□ 0.1
CTDSP1-212ENST00000494067 RBAK-RBAKDNI3L0D1 243 aa15.64■□□□□ 0.09
CTDSP1-212ENST00000494067 ANTXR2P58335 489 aa15.64■□□□□ 0.09
CTDSP1-212ENST00000494067 PSMC6P62333 389 aa15.64■□□□□ 0.09
CTDSP1-212ENST00000494067 ITGA7Q13683 1181 aa15.64■□□□□ 0.09
CTDSP1-212ENST00000494067 QRICH1Q2TAL8 776 aa15.64■□□□□ 0.09
CTDSP1-212ENST00000494067 ASPRV1Q53RT3 343 aa15.64■□□□□ 0.09
CTDSP1-212ENST00000494067 MFSD5Q6N075 450 aa15.64■□□□□ 0.09
CTDSP1-212ENST00000494067 SLC43A3Q8NBI5 491 aa15.64■□□□□ 0.09
CTDSP1-212ENST00000494067 WDR11Q9BZH6 1224 aa15.64■□□□□ 0.09
CTDSP1-212ENST00000494067 MAF1Q9H063 256 aa15.64■□□□□ 0.09
CTDSP1-212ENST00000494067 MAD2L2Q9UI95 211 aa15.64■□□□□ 0.09
CTDSP1-212ENST00000494067 KIAA1217Q5T5P2 1943 aa15.64■□□□□ 0.09
CTDSP1-212ENST00000494067 EYSQ5T1H1 3165 aa15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 RBM47A0AV96 593 aaKnown RBP15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 NKRFO15226 690 aaKnown RBP eCLIP15.63■□□□□ 0.091e-7■■□□□ 11.7
CTDSP1-212ENST00000494067 ARIH2O95376 493 aa15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 CD4P01730 458 aa15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 PARP1P09874 1014 aaKnown RBP15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 CPT1AP50416 773 aa15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 DUSP28Q4G0W2 176 aa15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 IFIT1BQ5T764 474 aaKnown RBP15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 CHST3Q7LGC8 479 aa15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 MCF2L2Q86YR7 1114 aa15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 RGS22Q8NE09 1264 aa15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 PPP1R13LQ8WUF5 828 aa15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 COPS5Q92905 334 aa15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 FAM161BQ96MY7 647 aa15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 POLR3EQ9NVU0 708 aa15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 UMODL1Q5DID0 1318 aa15.63■□□□□ 0.09
CTDSP1-212ENST00000494067 ERICH2A1L162 156 aa15.62■□□□□ 0.09
CTDSP1-212ENST00000494067 E7EWF7 191 aa15.62■□□□□ 0.09
CTDSP1-212ENST00000494067 C16orf59Q7L2K0 433 aa15.62■□□□□ 0.09
CTDSP1-212ENST00000494067 MTMR8Q96EF0 704 aa15.62■□□□□ 0.09
CTDSP1-212ENST00000494067 GUCD1Q96NT3 240 aa15.62■□□□□ 0.09
CTDSP1-212ENST00000494067 TAAR1Q96RJ0 339 aa15.62■□□□□ 0.09
CTDSP1-212ENST00000494067 PPP1R12CQ9BZL4 782 aa15.62■□□□□ 0.09
CTDSP1-212ENST00000494067 VAT1LQ9HCJ6 419 aa15.62■□□□□ 0.09
CTDSP1-212ENST00000494067 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms