RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PRUNE2Q8WUY3 3088 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 LAMA4Q16363 1823 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 CCDC171Q6TFL3 1326 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 SYNGAP1Q96PV0 1343 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 CHD9Q3L8U1 2897 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 SLC3A2P08195 630 aaKnown RBP9.53□□□□□ -0.88
HDAC6-234ENST00000493923 ALAS1P13196 640 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 AKR1A1P14550 325 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 ZSCAN20P17040 1043 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-234ENST00000493923 STAT2P52630 851 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 FAM193AP78312 1265 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 BEX3Q00994 111 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 IKQ13123 557 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-234ENST00000493923 KCNA10Q16322 511 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 CCDC144BQ3MJ40 725 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 DEFB123Q8N688 67 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 CHST13Q8NET6 341 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 TRERF1Q96PN7 1200 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 ZKSCAN3Q9BRR0 538 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 TOMM22Q9NS69 142 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 SYNPO2Q9UMS6 1093 aa9.53□□□□□ -0.88
HDAC6-234ENST00000493923 R3HCC1Q9Y3T6 440 aaKnown RBP9.53□□□□□ -0.88
HDAC6-234ENST00000493923 CTDP1Q9Y5B0 961 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-234ENST00000493923 UNC80Q8N2C7 3258 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 POTEB2H3BUK9 544 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 NFIBO00712 420 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 PLA2G6O60733 806 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 PQBP1O60828 265 aaKnown RBP9.52□□□□□ -0.89
HDAC6-234ENST00000493923 ACLYP53396 1101 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 OAZ1P54368 228 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 FAAP100Q0VG06 881 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 CCDC96Q2M329 555 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 BTNL9Q6UXG8 535 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 ZNF467Q7Z7K2 595 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-234ENST00000493923 FAM160B2Q86V87 743 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 HSCBQ8IWL3 235 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 CHURC1Q8WUH1 139 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 MS4A3Q96HJ5 214 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 UPF3AQ9H1J1 476 aaKnown RBP9.52□□□□□ -0.89
HDAC6-234ENST00000493923 RANBP17Q9H2T7 1088 aaKnown RBP9.52□□□□□ -0.89
HDAC6-234ENST00000493923 RWDD1Q9H446 243 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-234ENST00000493923 OSBPL3Q9H4L5 887 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 ACAD9Q9H845 621 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 MTMR10Q9NXD2 777 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 CYP39A1Q9NYL5 469 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 CCDC39Q9UFE4 941 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 BAZ2BQ9UIF8 2168 aaKnown RBP9.52□□□□□ -0.89
HDAC6-234ENST00000493923 FAM184BQ9ULE4 1060 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 CNPY2Q9Y2B0 182 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 ZMYM6O95789 1325 aa9.52□□□□□ -0.89
HDAC6-234ENST00000493923 CCDC66A2RUB6 948 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 DUSP11O75319 330 aaKnown RBP9.51□□□□□ -0.89
HDAC6-234ENST00000493923 GOLGA8HP0CJ92 632 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 PDHBP11177 359 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 TOP1P11387 765 aaKnown RBP9.51□□□□□ -0.89
HDAC6-234ENST00000493923 GSPT1P15170 499 aaKnown RBP9.51□□□□□ -0.89
HDAC6-234ENST00000493923 AKNAD1Q5T1N1 836 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 SYDE2Q5VT97 1194 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 C1orf53Q5VUE5 145 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 TAPT1Q6NXT6 567 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 CWC27Q6UX04 472 aaKnown RBP9.51□□□□□ -0.89
HDAC6-234ENST00000493923 NSMFQ6X4W1 530 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 EEPD1Q7L9B9 569 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 RNF180Q86T96 592 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 CREBRFQ8IUR6 639 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 FBXO16Q8IX29 292 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-234ENST00000493923 MSL3Q8N5Y2 521 aaKnown RBP9.51□□□□□ -0.89
HDAC6-234ENST00000493923 DCAF4Q8WV16 495 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 CLEC4DQ8WXI8 215 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 FAM161BQ96MY7 647 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 GUCD1Q96NT3 240 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 GZF1Q9H116 711 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-234ENST00000493923 TCP11L1Q9NUJ3 509 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 FBXO40Q9UH90 709 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 CCPG1Q9ULG6 757 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 TAF6LQ9Y6J9 622 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 GRIN2DO15399 1336 aa9.51□□□□□ -0.89
HDAC6-234ENST00000493923 KIAA0355O15063 1070 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 ASGR1P07306 291 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 CLTBP09497 229 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 C6orf222P0C671 652 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-234ENST00000493923 SNHG28P0DPA3 235 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 SMPD1P17405 629 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 CST5P28325 142 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-234ENST00000493923 CDK7P50613 346 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 GJA9P57773 515 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 ZNF543Q08ER8 600 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 BAATQ14032 418 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-234ENST00000493923 SLC30A10Q6XR72 485 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 TEX2Q8IWB9 1127 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 PPP1R13LQ8WUF5 828 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 TBC1D5Q92609 795 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 LBHD1Q9BQE6 289 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-234ENST00000493923 TSEN34Q9BSV6 310 aaKnown RBP9.5□□□□□ -0.89
HDAC6-234ENST00000493923 UBA5Q9GZZ9 404 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 ABHD16BQ9H3Z7 469 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 TMEM51Q9NW97 253 aa9.5□□□□□ -0.89
HDAC6-234ENST00000493923 GNEQ9Y223 722 aaKnown RBP9.5□□□□□ -0.89
HDAC6-234ENST00000493923 TTC28Q96AY4 2481 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 B4E1Z4 1266 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms