RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 TBX2Q13207 712 aaPredicted RBP15.47■□□□□ 0.07
VCP-207ENST00000493886 APTXQ7Z2E3 356 aaKnown RBP15.47■□□□□ 0.07
VCP-207ENST00000493886 POTEDQ86YR6 584 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 DESI2Q9BSY9 194 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 KANSL2Q9H9L4 492 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 RIC8AQ9NPQ8 531 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 NYAP2Q9P242 653 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 YDJCA8MPS7 323 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 ZBTB5O15062 677 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 C21orf2O43822 256 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 SPECC1LQ69YQ0 1117 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 KRT222Q8N1A0 295 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 LRRC15Q8TF66 581 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 MKL1Q969V6 931 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 MTMR8Q96EF0 704 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 TDRD3Q9H7E2 651 aaKnown RBP15.47■□□□□ 0.07
VCP-207ENST00000493886 L2HGDHQ9H9P8 463 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 KBTBD4Q9NVX7 518 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 COBLO75128 1261 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 MYL1P05976 194 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 TECP42680 631 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 TATDN1Q6P1N9 297 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 CUEDC2Q9H467 287 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 RWDD2AQ9UIY3 292 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 PLCG1P19174 1290 aa15.46■□□□□ 0.07
VCP-207ENST00000493886 SLC20A2Q08357 652 aa15.46■□□□□ 0.07
VCP-207ENST00000493886 PAK1Q13153 545 aa15.46■□□□□ 0.07
VCP-207ENST00000493886 RGS17Q9UGC6 210 aaPredicted RBP15.46■□□□□ 0.07
VCP-207ENST00000493886 GDAQ9Y2T3 454 aa15.46■□□□□ 0.07
VCP-207ENST00000493886 RAD21O60216 631 aa15.46■□□□□ 0.06
VCP-207ENST00000493886 POTEAQ6S8J7 498 aa15.46■□□□□ 0.06
VCP-207ENST00000493886 MNS1Q8NEH6 495 aa15.46■□□□□ 0.06
VCP-207ENST00000493886 NELFBQ8WX92 580 aa15.46■□□□□ 0.06
VCP-207ENST00000493886 MTMR9Q96QG7 549 aa15.46■□□□□ 0.06
VCP-207ENST00000493886 CARD6Q9BX69 1037 aa15.46■□□□□ 0.06
VCP-207ENST00000493886 MAGEF1Q9HAY2 307 aa15.46■□□□□ 0.06
VCP-207ENST00000493886 EDIL3O43854 480 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 CLCN6P51797 869 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 KCNB1Q14721 858 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 SEPT2Q15019 361 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 CALCRLQ16602 461 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 UBE2SQ16763 222 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 TRIM65Q6PJ69 517 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 TOGARAM2Q6ZUX3 1019 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 IGSF22Q8N9C0 903 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 DCAF4Q8WV16 495 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 CUL5Q93034 780 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 CTAGE1Q96RT6 745 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 GEMIN8Q9NWZ8 242 aaKnown RBP15.45■□□□□ 0.06
VCP-207ENST00000493886 TEX33O43247 280 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 KLRC4O43908 158 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 TDP2O95551 362 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 TXKP42681 527 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 PRCPP42785 496 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 SLC1A4P43007 532 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 TNNI2P48788 182 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 CCDC93Q567U6 631 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 SLFN13Q68D06 897 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 TMEM179Q6ZVK1 233 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 REXO1L1PQ8IX06 675 aa15.45■□□□□ 0.06
VCP-207ENST00000493886 PRMT6Q96LA8 375 aaPredicted RBP15.45■□□□□ 0.06
VCP-207ENST00000493886 ADD3Q9UEY8 706 aaKnown RBP15.45■□□□□ 0.06
VCP-207ENST00000493886 SLC37A4O43826 429 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 ENTPD3O75355 529 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 CLK2P49760 499 aaKnown RBP15.44■□□□□ 0.06
VCP-207ENST00000493886 MRPL12P52815 198 aaKnown RBP15.44■□□□□ 0.06
VCP-207ENST00000493886 ICA1Q05084 483 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 SIAH1Q8IUQ4 282 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 WDR24Q96S15 920 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 MMTAG2Q9BU76 263 aaKnown RBP15.44■□□□□ 0.06
VCP-207ENST00000493886 PDGFDQ9GZP0 370 aaPredicted RBP15.44■□□□□ 0.06
VCP-207ENST00000493886 MAPK8IP1Q9UQF2 711 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 PPP2R2CQ9Y2T4 447 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 ATRNL1Q5VV63 1379 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 GDF11O95390 407 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 SEMA3FQ13275 785 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 MTF1Q14872 753 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 CPLX3Q8WVH0 158 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 BAG1Q99933 345 aaPredicted RBP15.44■□□□□ 0.06
VCP-207ENST00000493886 GNG11P61952 73 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 ABCB5Q2M3G0 1257 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 FILIP1LQ4L180 1135 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 TMEM139Q8IV31 216 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 TC2NQ8N9U0 490 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 UBXN4Q92575 508 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 PSTPIP2Q9H939 334 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 SH3BP1Q9Y3L3 701 aa15.44■□□□□ 0.06
VCP-207ENST00000493886 RHOBTB3O94955 611 aa15.43■□□□□ 0.06
VCP-207ENST00000493886 SEC31AO94979 1220 aaKnown RBP15.43■□□□□ 0.06
VCP-207ENST00000493886 FXR2P51116 673 aaKnown RBP eCLIP15.43■□□□□ 0.069e-7■■■■□ 20
VCP-207ENST00000493886 QRICH1Q2TAL8 776 aa15.43■□□□□ 0.06
VCP-207ENST00000493886 ADSSL1Q8N142 457 aa15.43■□□□□ 0.06
VCP-207ENST00000493886 CALML4Q96GE6 196 aa15.43■□□□□ 0.06
VCP-207ENST00000493886 ERICH4A6NGS2 130 aa15.43■□□□□ 0.06
VCP-207ENST00000493886 TMEM266Q2M3C6 531 aa15.43■□□□□ 0.06
VCP-207ENST00000493886 TTLL6Q8N841 843 aa15.43■□□□□ 0.06
VCP-207ENST00000493886 IRX2Q9BZI1 471 aaPredicted RBP15.43■□□□□ 0.06
VCP-207ENST00000493886 LRWD1Q9UFC0 647 aa15.43■□□□□ 0.06
VCP-207ENST00000493886 PBX1P40424 430 aa15.42■□□□□ 0.06
VCP-207ENST00000493886 PPP4R3AQ6IN85 833 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms