RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 CUL4AQ13619 759 aa8.73□□□□□ -1.01
VEGFA-214ENST00000493786 GRB14Q14449 540 aa8.73□□□□□ -1.01
VEGFA-214ENST00000493786 SAFBQ15424 915 aaKnown RBP eCLIP8.73□□□□□ -1.01
VEGFA-214ENST00000493786 PKN1Q16512 942 aa8.73□□□□□ -1.01
VEGFA-214ENST00000493786 MCTP2Q6DN12 878 aa8.73□□□□□ -1.01
VEGFA-214ENST00000493786 GALNT17Q6IS24 598 aa8.73□□□□□ -1.01
VEGFA-214ENST00000493786 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.73□□□□□ -1.015e-7■□□□□ 8.4
VEGFA-214ENST00000493786 RAET1EQ8TD07 263 aa8.73□□□□□ -1.01
VEGFA-214ENST00000493786 CLEC4DQ8WXI8 215 aa8.73□□□□□ -1.01
VEGFA-214ENST00000493786 INTS4Q96HW7 963 aaKnown RBP8.73□□□□□ -1.01
VEGFA-214ENST00000493786 C8orf76Q96K31 380 aa8.73□□□□□ -1.01
VEGFA-214ENST00000493786 APBA2Q99767 749 aa8.73□□□□□ -1.01
VEGFA-214ENST00000493786 CYP39A1Q9NYL5 469 aa8.73□□□□□ -1.01
VEGFA-214ENST00000493786 VPS54Q9P1Q0 977 aa8.73□□□□□ -1.01
VEGFA-214ENST00000493786 ADD3Q9UEY8 706 aaKnown RBP8.73□□□□□ -1.01
VEGFA-214ENST00000493786 COL11A1P12107 1806 aaPredicted RBP8.73□□□□□ -1.01
VEGFA-214ENST00000493786 ESYT2A0FGR8 921 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 SPDYE3A6NKU9 549 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 H3BQV1 296 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 PGK2P07205 417 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 PDCP20941 246 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 FOSBP53539 338 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 RPS6P62753 249 aaKnown RBP8.72□□□□□ -1.01
VEGFA-214ENST00000493786 PRKCZQ05513 592 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 GNL2Q13823 731 aaKnown RBP8.72□□□□□ -1.01
VEGFA-214ENST00000493786 BAATQ14032 418 aaPredicted RBP8.72□□□□□ -1.01
VEGFA-214ENST00000493786 MORN1Q5T089 497 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 IFFO2Q5TF58 517 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 SLC30A10Q6XR72 485 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 CTU1Q7Z7A3 348 aaKnown RBP8.72□□□□□ -1.01
VEGFA-214ENST00000493786 FCHSD1Q86WN1 690 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 TRMT44Q8IYL2 757 aaKnown RBP8.72□□□□□ -1.01
VEGFA-214ENST00000493786 REXO1Q8N1G1 1221 aaKnown RBP8.72□□□□□ -1.01
VEGFA-214ENST00000493786 RIC8AQ9NPQ8 531 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 PRDM10Q9NQV6 1147 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 FOXD4L1Q9NU39 408 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 SRRDQ9UH36 339 aa8.72□□□□□ -1.01
VEGFA-214ENST00000493786 BAZ2BQ9UIF8 2168 aaKnown RBP8.72□□□□□ -1.01
VEGFA-214ENST00000493786 ASB14A6NK59 587 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 PIK3CDO00329 1044 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 DTNBO60941 627 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 FOSP01100 380 aaPredicted RBP8.71□□□□□ -1.02
VEGFA-214ENST00000493786 FDPSP14324 419 aaKnown RBP8.71□□□□□ -1.02
VEGFA-214ENST00000493786 CYP2B6P20813 491 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 CTGFP29279 349 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 HOXA13P31271 388 aaPredicted RBP8.71□□□□□ -1.02
VEGFA-214ENST00000493786 FLT3LGP49771 235 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 HSD17B4P51659 736 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 AP3B2Q13367 1082 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 PKN2Q16513 984 aaKnown RBP8.71□□□□□ -1.02
VEGFA-214ENST00000493786 ARHGEF16Q5VV41 709 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 OTOP1Q7RTM1 612 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 DNERQ8NFT8 737 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 SYTL5Q8TDW5 730 aaPredicted RBP8.71□□□□□ -1.02
VEGFA-214ENST00000493786 NSUN6Q8TEA1 469 aaKnown RBP8.71□□□□□ -1.02
VEGFA-214ENST00000493786 AIFM3Q96NN9 605 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 ZMYND12Q9H0C1 365 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 BIN2Q9UBW5 565 aaPredicted RBP8.71□□□□□ -1.02
VEGFA-214ENST00000493786 PCDHA4Q9UN74 947 aa8.71□□□□□ -1.02
VEGFA-214ENST00000493786 DIS3Q9Y2L1 958 aaKnown RBP8.71□□□□□ -1.02
VEGFA-214ENST00000493786 MYH6P13533 1939 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 LOC102724159A0A0B4J2E5 919 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 CCDC194A0A1B0GVG4 234 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 OPLAHO14841 1288 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 COBLO75128 1261 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 HOXC6P09630 235 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 XRCC5P13010 732 aaKnown RBP8.7□□□□□ -1.02
VEGFA-214ENST00000493786 KRT2P35908 639 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 GUCY1B3Q02153 619 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 CNTN2Q02246 1040 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 GHRHRQ02643 423 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 PDE4DQ08499 809 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 IRF5Q13568 498 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 PWP2Q15269 919 aaKnown RBP8.7□□□□□ -1.02
VEGFA-214ENST00000493786 UBE2SQ16763 222 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 ZNF792Q3KQV3 632 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 MFSD14CQ5VZR4 134 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 LARP1BQ659C4 914 aaKnown RBP8.7□□□□□ -1.02
VEGFA-214ENST00000493786 KRT40Q6A162 431 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 TYW1BQ6NUM6 668 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 USP17L6PQ6QN14 398 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 ZNF467Q7Z7K2 595 aaPredicted RBP8.7□□□□□ -1.02
VEGFA-214ENST00000493786 BLIDQ8IZY5 108 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 DAGLBQ8NCG7 672 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 SPRYD3Q8NCJ5 442 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 SLAIN1Q8ND83 568 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 RMDN3Q96TC7 470 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 PHF20Q9BVI0 1012 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 GABRQQ9UN88 632 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 KCNJ14Q9UNX9 436 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 CNPY2Q9Y2B0 182 aa8.7□□□□□ -1.02
VEGFA-214ENST00000493786 DNAJC25-GNG10A0A024R161 153 aa8.69□□□□□ -1.02
VEGFA-214ENST00000493786 VPS37CA5D8V6 355 aaPredicted RBP8.69□□□□□ -1.02
VEGFA-214ENST00000493786 MEIS2O14770 477 aa8.69□□□□□ -1.02
VEGFA-214ENST00000493786 ADCY3O60266 1144 aa8.69□□□□□ -1.02
VEGFA-214ENST00000493786 MMP1P03956 469 aa8.69□□□□□ -1.02
VEGFA-214ENST00000493786 PDIA4P13667 645 aaKnown RBP8.69□□□□□ -1.02
VEGFA-214ENST00000493786 EIF2AK2P19525 551 aaKnown RBP8.69□□□□□ -1.02
VEGFA-214ENST00000493786 CCND2P30279 289 aa8.69□□□□□ -1.02
VEGFA-214ENST00000493786 ALDH5A1P51649 535 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 949.1 ms