RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 IQSEC1Q6DN90 963 aa17.15■□□□□ 0.34
ATG4B-223ENST00000493618 MORC4Q8TE76 937 aa17.15■□□□□ 0.34
ATG4B-223ENST00000493618 KRT23Q9C075 422 aa17.15■□□□□ 0.34
ATG4B-223ENST00000493618 MROH7Q68CQ1 1323 aa17.15■□□□□ 0.34
ATG4B-223ENST00000493618 GBF1Q92538 1859 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 DLL1O00548 723 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 DHX16O60231 1041 aaKnown RBP17.14■□□□□ 0.33
ATG4B-223ENST00000493618 TIMP1P01033 207 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 PSMC6P62333 389 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 RPS6P62753 249 aaKnown RBP17.14■□□□□ 0.33
ATG4B-223ENST00000493618 NKX3-2P78367 333 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 PTH1RQ03431 593 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 CYB5R4Q7L1T6 521 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 ADGRF4Q8IZF3 695 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 TBC1D5Q92609 795 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 ANKS1AQ92625 1134 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 RNPC3Q96LT9 517 aaKnown RBP17.14■□□□□ 0.33
ATG4B-223ENST00000493618 UBAC1Q9BSL1 405 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 PPP1R12CQ9BZL4 782 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 VAT1LQ9HCJ6 419 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 TBX21Q9UL17 535 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 WDR19Q8NEZ3 1342 aa17.14■□□□□ 0.33
ATG4B-223ENST00000493618 MYH7BA7E2Y1 1941 aa17.13■□□□□ 0.33
ATG4B-223ENST00000493618 CHMLP26374 656 aa17.13■□□□□ 0.33
ATG4B-223ENST00000493618 PDE4DQ08499 809 aa17.13■□□□□ 0.33
ATG4B-223ENST00000493618 FAM126BQ8IXS8 530 aa17.13■□□□□ 0.33
ATG4B-223ENST00000493618 WDR11Q9BZH6 1224 aa17.13■□□□□ 0.33
ATG4B-223ENST00000493618 CNNM2Q9H8M5 875 aa17.13■□□□□ 0.33
ATG4B-223ENST00000493618 TLR3O15455 904 aaKnown RBP17.12■□□□□ 0.33
ATG4B-223ENST00000493618 ZEB2O60315 1214 aa17.12■□□□□ 0.33
ATG4B-223ENST00000493618 PARP1P09874 1014 aaKnown RBP17.12■□□□□ 0.33
ATG4B-223ENST00000493618 ITGA7Q13683 1181 aa17.12■□□□□ 0.33
ATG4B-223ENST00000493618 ASPRV1Q53RT3 343 aa17.12■□□□□ 0.33
ATG4B-223ENST00000493618 IFIT1BQ5T764 474 aaKnown RBP17.12■□□□□ 0.33
ATG4B-223ENST00000493618 ZNF697Q5TEC3 545 aa17.12■□□□□ 0.33
ATG4B-223ENST00000493618 STAG2Q8N3U4 1231 aa17.12■□□□□ 0.33
ATG4B-223ENST00000493618 GUCD1Q96NT3 240 aa17.12■□□□□ 0.33
ATG4B-223ENST00000493618 PNMA2Q9UL42 364 aa17.12■□□□□ 0.33
ATG4B-223ENST00000493618 GRIN2DO15399 1336 aa17.12■□□□□ 0.33
ATG4B-223ENST00000493618 RAD50Q92878 1312 aa17.12■□□□□ 0.33
ATG4B-223ENST00000493618 MYL3P08590 195 aa17.11■□□□□ 0.33
ATG4B-223ENST00000493618 NT5C2P49902 561 aa17.11■□□□□ 0.33
ATG4B-223ENST00000493618 QRICH1Q2TAL8 776 aa17.11■□□□□ 0.33
ATG4B-223ENST00000493618 DUSP28Q4G0W2 176 aa17.11■□□□□ 0.33
ATG4B-223ENST00000493618 MFSD5Q6N075 450 aa17.11■□□□□ 0.33
ATG4B-223ENST00000493618 OR6J1Q8NGC5 347 aa17.11■□□□□ 0.33
ATG4B-223ENST00000493618 PPP1R13LQ8WUF5 828 aa17.11■□□□□ 0.33
ATG4B-223ENST00000493618 COPS5Q92905 334 aa17.11■□□□□ 0.33
ATG4B-223ENST00000493618 JMJD4Q9H9V9 463 aa17.11■□□□□ 0.33
ATG4B-223ENST00000493618 STXBP5LQ9Y2K9 1186 aa17.11■□□□□ 0.33
ATG4B-223ENST00000493618 Q9Y3F1 56 aa17.11■□□□□ 0.33
ATG4B-223ENST00000493618 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
ATG4B-223ENST00000493618 ABCB11O95342 1321 aa17.11■□□□□ 0.33
ATG4B-223ENST00000493618 SCN5AQ14524 2016 aa17.1■□□□□ 0.33
ATG4B-223ENST00000493618 RBM47A0AV96 593 aaKnown RBP17.1■□□□□ 0.33
ATG4B-223ENST00000493618 CABYRO75952 493 aa17.1■□□□□ 0.33
ATG4B-223ENST00000493618 CD4P01730 458 aa17.1■□□□□ 0.33
ATG4B-223ENST00000493618 CYP21A2P08686 494 aa17.1■□□□□ 0.33
ATG4B-223ENST00000493618 ACRP10323 421 aa17.1■□□□□ 0.33
ATG4B-223ENST00000493618 CYP2C18P33260 490 aa17.1■□□□□ 0.33
ATG4B-223ENST00000493618 SEC23AQ15436 765 aa17.1■□□□□ 0.33
ATG4B-223ENST00000493618 FAM109BQ6ICB4 259 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-223ENST00000493618 SLC43A3Q8NBI5 491 aa17.1■□□□□ 0.33
ATG4B-223ENST00000493618 RUFY2Q8WXA3 655 aa17.1■□□□□ 0.33
ATG4B-223ENST00000493618 TAAR1Q96RJ0 339 aa17.1■□□□□ 0.33
ATG4B-223ENST00000493618 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.1■□□□□ 0.335e-7■□□□□ 10.9
ATG4B-223ENST00000493618 TRPV6Q9H1D0 765 aa17.1■□□□□ 0.33
ATG4B-223ENST00000493618 COL20A1Q9P218 1284 aa17.1■□□□□ 0.33
ATG4B-223ENST00000493618 BAZ2BQ9UIF8 2168 aaKnown RBP17.1■□□□□ 0.33
ATG4B-223ENST00000493618 LOC102724159A0A0B4J2E5 919 aa17.09■□□□□ 0.33
ATG4B-223ENST00000493618 CSF2RAP15509 400 aa17.09■□□□□ 0.33
ATG4B-223ENST00000493618 EDNRBP24530 442 aa17.09■□□□□ 0.33
ATG4B-223ENST00000493618 SMAD3P84022 425 aaKnown RBP17.09■□□□□ 0.33
ATG4B-223ENST00000493618 PPP2R5BQ15173 497 aa17.09■□□□□ 0.33
ATG4B-223ENST00000493618 PWP2Q15269 919 aaKnown RBP17.09■□□□□ 0.33
ATG4B-223ENST00000493618 CHST3Q7LGC8 479 aa17.09■□□□□ 0.33
ATG4B-223ENST00000493618 FBXO11Q86XK2 927 aa17.09■□□□□ 0.33
ATG4B-223ENST00000493618 DNERQ8NFT8 737 aa17.09■□□□□ 0.33
ATG4B-223ENST00000493618 MPHOSPH6Q99547 160 aaKnown RBP17.09■□□□□ 0.33
ATG4B-223ENST00000493618 SENP2Q9HC62 589 aa17.09■□□□□ 0.33
ATG4B-223ENST00000493618 UMODL1Q5DID0 1318 aa17.09■□□□□ 0.33
ATG4B-223ENST00000493618 SCN10AQ9Y5Y9 1956 aa17.08■□□□□ 0.33
ATG4B-223ENST00000493618 B4GALT4O60513 344 aa17.08■□□□□ 0.32
ATG4B-223ENST00000493618 ARIH2O95376 493 aa17.08■□□□□ 0.32
ATG4B-223ENST00000493618 TRDNQ13061 729 aa17.08■□□□□ 0.32
ATG4B-223ENST00000493618 PPIGQ13427 754 aaKnown RBP eCLIP17.08■□□□□ 0.321e-10■■□□□ 12.8
ATG4B-223ENST00000493618 C16orf59Q7L2K0 433 aa17.08■□□□□ 0.32
ATG4B-223ENST00000493618 TMEM199Q8N511 208 aa17.08■□□□□ 0.32
ATG4B-223ENST00000493618 RGS22Q8NE09 1264 aa17.08■□□□□ 0.32
ATG4B-223ENST00000493618 SYTL5Q8TDW5 730 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-223ENST00000493618 TTYH1Q9H313 450 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-223ENST00000493618 SEMA6BQ9H3T3 888 aa17.08■□□□□ 0.32
ATG4B-223ENST00000493618 MAD2L2Q9UI95 211 aa17.08■□□□□ 0.32
ATG4B-223ENST00000493618 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-223ENST00000493618 KLRF2D3W0D1 207 aa17.07■□□□□ 0.32
ATG4B-223ENST00000493618 E7EWF7 191 aa17.07■□□□□ 0.32
ATG4B-223ENST00000493618 IFIT3O14879 490 aaKnown RBP17.07■□□□□ 0.32
ATG4B-223ENST00000493618 SGSM2O43147 1006 aa17.07■□□□□ 0.32
ATG4B-223ENST00000493618 TXNP10599 105 aaKnown RBP17.07■□□□□ 0.32
ATG4B-223ENST00000493618 CPT1AP50416 773 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms