RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 KRT14P02533 472 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 TNNI2P48788 182 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 ADAMTS7Q9UKP4 1686 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 RASSF10A6NK89 507 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 LRRC53A6NM62 1247 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 KLRC4O43908 158 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 TACC1O75410 805 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 GNGT1P63211 74 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 PDCLQ13371 301 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 PICALMQ13492 652 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 KLHL7Q8IXQ5 586 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 TBCKQ8TEA7 893 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 GLI3P10071 1580 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 PSMD14O00487 310 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 USO1O60763 962 aaKnown RBP17.34■□□□□ 0.37
CACUL1-206ENST00000493518 KIF11P52732 1056 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 RPS8P62241 208 aaKnown RBP17.34■□□□□ 0.37
CACUL1-206ENST00000493518 TRADDQ15628 312 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 PACS2Q86VP3 889 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 NBPF5PQ86XG9 351 aaPredicted RBP17.34■□□□□ 0.37
CACUL1-206ENST00000493518 C4orf32Q8N8J7 132 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 ARL8AQ96BM9 186 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 PIGSQ96S52 555 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 BRIP1Q9BX63 1249 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 TRIM9Q9C026 710 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 GPCPD1Q9NPB8 672 aa17.34■□□□□ 0.37
CACUL1-206ENST00000493518 BACH1O14867 736 aa17.33■□□□□ 0.37
CACUL1-206ENST00000493518 CKAP4Q07065 602 aaKnown RBP17.33■□□□□ 0.37
CACUL1-206ENST00000493518 PPP2R5BQ15173 497 aa17.33■□□□□ 0.37
CACUL1-206ENST00000493518 TTC31Q49AM3 519 aaPredicted RBP17.33■□□□□ 0.37
CACUL1-206ENST00000493518 ARHGAP20Q9P2F6 1191 aa17.33■□□□□ 0.37
CACUL1-206ENST00000493518 PCDHA13Q9Y5I0 950 aa17.33■□□□□ 0.37
CACUL1-206ENST00000493518 EEF1GP26641 437 aaKnown RBP17.33■□□□□ 0.36
CACUL1-206ENST00000493518 CCNI2Q6ZMN8 369 aaPredicted RBP17.33■□□□□ 0.36
CACUL1-206ENST00000493518 LRRC47Q8N1G4 583 aaKnown RBP17.33■□□□□ 0.36
CACUL1-206ENST00000493518 ZNF507Q8TCN5 953 aa17.33■□□□□ 0.36
CACUL1-206ENST00000493518 SALL4Q9UJQ4 1053 aa17.33■□□□□ 0.36
CACUL1-206ENST00000493518 COL1A1P02452 1464 aaPredicted RBP17.33■□□□□ 0.36
CACUL1-206ENST00000493518 TNS2Q63HR2 1409 aa17.33■□□□□ 0.36
CACUL1-206ENST00000493518 HPDP32754 393 aaPredicted RBP17.32■□□□□ 0.36
CACUL1-206ENST00000493518 SAMD1Q6SPF0 538 aaPredicted RBP17.32■□□□□ 0.36
CACUL1-206ENST00000493518 PTF1AQ7RTS3 328 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 DNAJC7Q99615 494 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 NUDT12Q9BQG2 462 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 TMEM47Q9BQJ4 181 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 BCCIPQ9P287 314 aaKnown RBP eCLIP17.32■□□□□ 0.36
CACUL1-206ENST00000493518 MYO1AQ9UBC5 1043 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 ANAPC4Q9UJX5 808 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 OR52Z1P0C646 297 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 SRGNP10124 158 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 SLC1A4P43007 532 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 ZBED6P86452 979 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 CCDC40Q4G0X9 1142 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 TBC1D9BQ66K14 1250 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 GIMAP8Q8ND71 665 aaPredicted RBP17.32■□□□□ 0.36
CACUL1-206ENST00000493518 MED4Q9NPJ6 270 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 NFU1Q9UMS0 254 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 SPEF2Q9C093 1822 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 TRAF5O00463 557 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 TDP2O95551 362 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 CCNE1P24864 410 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 HLTFQ14527 1009 aaKnown RBP eCLIP17.32■□□□□ 0.36
CACUL1-206ENST00000493518 PARP10Q53GL7 1025 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 SPATA4Q8NEY3 305 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 SEMA6BQ9H3T3 888 aa17.32■□□□□ 0.36
CACUL1-206ENST00000493518 PDS5AQ29RF7 1337 aaKnown RBP17.31■□□□□ 0.36
CACUL1-206ENST00000493518 ATP2C2O75185 946 aa17.31■□□□□ 0.36
CACUL1-206ENST00000493518 GUCY2DQ02846 1103 aa17.31■□□□□ 0.36
CACUL1-206ENST00000493518 C8orf74Q6P047 294 aa17.31■□□□□ 0.36
CACUL1-206ENST00000493518 TSEN2Q8NCE0 465 aaKnown RBP17.31■□□□□ 0.36
CACUL1-206ENST00000493518 KIAA0895Q8NCT3 520 aa17.31■□□□□ 0.36
CACUL1-206ENST00000493518 CALML4Q96GE6 196 aa17.31■□□□□ 0.36
CACUL1-206ENST00000493518 MYH6P13533 1939 aa17.31■□□□□ 0.36
CACUL1-206ENST00000493518 PAFAH1B1P43034 410 aa17.31■□□□□ 0.36
CACUL1-206ENST00000493518 UBE2SQ16763 222 aa17.31■□□□□ 0.36
CACUL1-206ENST00000493518 RBM12Q9NTZ6 932 aaKnown RBP17.31■□□□□ 0.36
CACUL1-206ENST00000493518 SEC63Q9UGP8 760 aaKnown RBP17.31■□□□□ 0.36
CACUL1-206ENST00000493518 TAF1P21675 1872 aa17.31■□□□□ 0.36
CACUL1-206ENST00000493518 NUP188Q5SRE5 1749 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 AGPSO00116 658 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 EHHADHQ08426 723 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 RAPGEF1Q13905 1077 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 UBE4AQ14139 1066 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 NDST4Q9H3R1 872 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 MAD2L2Q9UI95 211 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.3■□□□□ 0.36
CACUL1-206ENST00000493518 TRAPPC10P48553 1259 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 VAV2P52735 878 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 AMOTL1Q8IY63 956 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 OSBPL9Q96SU4 736 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 THAP9Q9H5L6 903 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 LDHBP07195 334 aaKnown RBP17.3■□□□□ 0.36
CACUL1-206ENST00000493518 TUBB2AQ13885 445 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 NONOQ15233 471 aaKnown RBP eCLIP17.3■□□□□ 0.36
CACUL1-206ENST00000493518 WDR93Q6P2C0 686 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 EHBP1Q8NDI1 1231 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 SNX29Q8TEQ0 813 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 NLRP3Q96P20 1036 aa17.3■□□□□ 0.36
CACUL1-206ENST00000493518 TUBB2BQ9BVA1 445 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms