RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 TNPO2O14787 897 aaKnown RBP13.26□□□□□ -0.29
LSM2-214ENST00000493387 CFBP00751 764 aa13.26□□□□□ -0.29
LSM2-214ENST00000493387 FOSP01100 380 aaPredicted RBP13.26□□□□□ -0.29
LSM2-214ENST00000493387 PTPREP23469 700 aa13.26□□□□□ -0.29
LSM2-214ENST00000493387 PSMC4P43686 418 aa13.26□□□□□ -0.29
LSM2-214ENST00000493387 HSD17B4P51659 736 aa13.26□□□□□ -0.29
LSM2-214ENST00000493387 KRT40Q6A162 431 aa13.26□□□□□ -0.29
LSM2-214ENST00000493387 TYW1BQ6NUM6 668 aa13.26□□□□□ -0.29
LSM2-214ENST00000493387 NSMFQ6X4W1 530 aa13.26□□□□□ -0.29
LSM2-214ENST00000493387 RNF207Q6ZRF8 634 aa13.26□□□□□ -0.29
LSM2-214ENST00000493387 GPR142Q7Z601 462 aa13.26□□□□□ -0.29
LSM2-214ENST00000493387 SOCS4Q8WXH5 440 aa13.26□□□□□ -0.29
LSM2-214ENST00000493387 AIFM3Q96NN9 605 aa13.26□□□□□ -0.29
LSM2-214ENST00000493387 PHF20Q9BVI0 1012 aa13.26□□□□□ -0.29
LSM2-214ENST00000493387 PCDHA4Q9UN74 947 aa13.26□□□□□ -0.29
LSM2-214ENST00000493387 B4DLN1 442 aa13.25□□□□□ -0.29
LSM2-214ENST00000493387 MMP1P03956 469 aa13.25□□□□□ -0.29
LSM2-214ENST00000493387 AP3B2Q13367 1082 aa13.25□□□□□ -0.29
LSM2-214ENST00000493387 BAATQ14032 418 aaPredicted RBP13.25□□□□□ -0.29
LSM2-214ENST00000493387 GRB14Q14449 540 aa13.25□□□□□ -0.29
LSM2-214ENST00000493387 BLIDQ8IZY5 108 aa13.25□□□□□ -0.29
LSM2-214ENST00000493387 REXO1Q8N1G1 1221 aaKnown RBP13.25□□□□□ -0.29
LSM2-214ENST00000493387 IPO9Q96P70 1041 aaKnown RBP13.25□□□□□ -0.29
LSM2-214ENST00000493387 NUDT12Q9BQG2 462 aa13.25□□□□□ -0.29
LSM2-214ENST00000493387 EHMT1Q9H9B1 1298 aa13.25□□□□□ -0.29
LSM2-214ENST00000493387 A1CFQ9NQ94 594 aaKnown RBP13.25□□□□□ -0.29
LSM2-214ENST00000493387 CYP39A1Q9NYL5 469 aa13.25□□□□□ -0.29
LSM2-214ENST00000493387 LOC102724159A0A0B4J2E5 919 aa13.24□□□□□ -0.29
LSM2-214ENST00000493387 POTEB2H3BUK9 544 aa13.24□□□□□ -0.29
LSM2-214ENST00000493387 OPLAHO14841 1288 aa13.24□□□□□ -0.29
LSM2-214ENST00000493387 DTNBO60941 627 aa13.24□□□□□ -0.29
LSM2-214ENST00000493387 TAL1P17542 331 aaPredicted RBP13.24□□□□□ -0.29
LSM2-214ENST00000493387 KRT2P35908 639 aa13.24□□□□□ -0.29
LSM2-214ENST00000493387 CTCFP49711 727 aaPredicted RBP13.24□□□□□ -0.29
LSM2-214ENST00000493387 RPS6P62753 249 aaKnown RBP13.24□□□□□ -0.29
LSM2-214ENST00000493387 PWP2Q15269 919 aaKnown RBP13.24□□□□□ -0.29
LSM2-214ENST00000493387 SPRYD3Q8NCJ5 442 aa13.24□□□□□ -0.29
LSM2-214ENST00000493387 SYTL5Q8TDW5 730 aaPredicted RBP13.24□□□□□ -0.29
LSM2-214ENST00000493387 ZNF296Q8WUU4 475 aaPredicted RBP13.24□□□□□ -0.29
LSM2-214ENST00000493387 MPHOSPH6Q99547 160 aaKnown RBP13.24□□□□□ -0.29
LSM2-214ENST00000493387 ADD3Q9UEY8 706 aaKnown RBP13.24□□□□□ -0.29
LSM2-214ENST00000493387 KCNJ14Q9UNX9 436 aa13.24□□□□□ -0.29
LSM2-214ENST00000493387 DIS3Q9Y2L1 958 aaKnown RBP13.24□□□□□ -0.29
LSM2-214ENST00000493387 DNAJC25-GNG10A0A024R161 153 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 SPDYE3A6NKU9 549 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 MEIS2O14770 477 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 SYT1P21579 422 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 ADORA2AP29274 412 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 RGS2P41220 211 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 FOSBP53539 338 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 PRMT2P55345 433 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 MAP2K5Q13163 448 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 MORN1Q5T089 497 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 DPP9Q86TI2 863 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 DNERQ8NFT8 737 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 TRIM47Q96LD4 638 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 FOXP1Q9H334 677 aaPredicted RBP13.23□□□□□ -0.29
LSM2-214ENST00000493387 SMCHD1A6NHR9 2005 aa13.23□□□□□ -0.29
LSM2-214ENST00000493387 STX6O43752 255 aa13.22□□□□□ -0.29
LSM2-214ENST00000493387 HOXC6P09630 235 aa13.22□□□□□ -0.29
LSM2-214ENST00000493387 HSPA1AP0DMV8 641 aaKnown RBP13.22□□□□□ -0.29
LSM2-214ENST00000493387 HSPA1BP0DMV9 641 aaKnown RBP13.22□□□□□ -0.29
LSM2-214ENST00000493387 HOXA13P31271 388 aaPredicted RBP13.22□□□□□ -0.29
LSM2-214ENST00000493387 CLK2P49760 499 aaKnown RBP13.22□□□□□ -0.29
LSM2-214ENST00000493387 GUCY1B3Q02153 619 aa13.22□□□□□ -0.29
LSM2-214ENST00000493387 GNL2Q13823 731 aaKnown RBP13.22□□□□□ -0.29
LSM2-214ENST00000493387 NPY5RQ15761 445 aa13.22□□□□□ -0.29
LSM2-214ENST00000493387 USP17L6PQ6QN14 398 aa13.22□□□□□ -0.29
LSM2-214ENST00000493387 KRT25Q7Z3Z0 450 aa13.22□□□□□ -0.29
LSM2-214ENST00000493387 ZNF467Q7Z7K2 595 aaPredicted RBP13.22□□□□□ -0.29
LSM2-214ENST00000493387 FCHSD1Q86WN1 690 aa13.22□□□□□ -0.29
LSM2-214ENST00000493387 DIS3L2Q8IYB7 885 aaKnown RBP13.22□□□□□ -0.29
LSM2-214ENST00000493387 TRMT44Q8IYL2 757 aaKnown RBP13.22□□□□□ -0.29
LSM2-214ENST00000493387 FAM133AQ8N9E0 248 aa13.22□□□□□ -0.29
LSM2-214ENST00000493387 CD99L2Q8TCZ2 262 aa13.22□□□□□ -0.29
LSM2-214ENST00000493387 NSUN6Q8TEA1 469 aaKnown RBP13.22□□□□□ -0.29
LSM2-214ENST00000493387 TBC1D5Q92609 795 aa13.22□□□□□ -0.29
LSM2-214ENST00000493387 SHISA4Q96DD7 197 aa13.22□□□□□ -0.29
LSM2-214ENST00000493387 GJB4Q9NTQ9 266 aa13.22□□□□□ -0.29
LSM2-214ENST00000493387 GJD2Q9UKL4 321 aa13.22□□□□□ -0.29
LSM2-214ENST00000493387 CCDC194A0A1B0GVG4 234 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 M0R2N6 131 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 HSPA8P11142 646 aaKnown RBP13.21□□□□□ -0.29
LSM2-214ENST00000493387 XRCC5P13010 732 aaKnown RBP13.21□□□□□ -0.29
LSM2-214ENST00000493387 UBE2SQ16763 222 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 ZNF792Q3KQV3 632 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 JAKMIP3Q5VZ66 844 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 MCTP1Q6DN14 999 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 XRRA1Q6P2D8 792 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 SLC30A10Q6XR72 485 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 MSL3Q8N5Y2 521 aaKnown RBP13.21□□□□□ -0.29
LSM2-214ENST00000493387 USP6NLQ92738 828 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 IWS1Q96ST2 819 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 RMDN3Q96TC7 470 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 BIN2Q9UBW5 565 aaPredicted RBP13.21□□□□□ -0.29
LSM2-214ENST00000493387 SRRDQ9UH36 339 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 TSKSQ9UJT2 592 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 PCDHA6Q9UN73 950 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 PCDHA8Q9Y5H6 950 aa13.21□□□□□ -0.29
LSM2-214ENST00000493387 VPS37CA5D8V6 355 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms