RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 USP17L21D6R901 530 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 SLC25A27O95847 323 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 PGK2P07205 417 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 RARBP10826 455 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 EEF2P13639 858 aaKnown RBP8.64□□□□□ -1.03
SPTA1-208ENST00000492934 ATP5JP18859 108 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 ADCYAP1R1P41586 468 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 KCTD2Q14681 263 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 LRRC41Q15345 812 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 SKIV2LQ15477 1246 aaKnown RBP8.64□□□□□ -1.03
SPTA1-208ENST00000492934 CSPP1Q1MSJ5 1256 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 PRAMEF19Q5SWL8 479 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 FAM83BQ5T0W9 1011 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 SLC39A5Q6ZMH5 540 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 SIAH1Q8IUQ4 282 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 FERMT2Q96AC1 680 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 LENG1Q96BZ8 264 aaPredicted RBP8.64□□□□□ -1.03
SPTA1-208ENST00000492934 XPNPEP3Q9NQH7 507 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 PDLIM7Q9NR12 457 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 ZBTB40Q9NUA8 1239 aa8.64□□□□□ -1.03
SPTA1-208ENST00000492934 ARPP21Q9UBL0 812 aaPredicted RBP8.64□□□□□ -1.03
SPTA1-208ENST00000492934 CUL9Q8IWT3 2517 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 GREB1LQ9C091 1923 aaPredicted RBP8.63□□□□□ -1.03
SPTA1-208ENST00000492934 CFAP99D6REC4 459 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 COPB2P35606 906 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 SNX17Q15036 470 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 UBE3CQ15386 1083 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 C9orf50Q5SZB4 431 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 PTCRAQ6ISU1 281 aaPredicted RBP8.63□□□□□ -1.03
SPTA1-208ENST00000492934 ZSCAN25Q6NSZ9 544 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 RIOX2Q8IUF8 465 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 STK11IPQ8N1F8 1099 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 BADQ92934 168 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 GUCD1Q96NT3 240 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 NUP88Q99567 741 aaPredicted RBP8.63□□□□□ -1.03
SPTA1-208ENST00000492934 LRRCC1Q9C099 1032 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 PUS7LQ9H0K6 701 aaKnown RBP8.63□□□□□ -1.03
SPTA1-208ENST00000492934 CHMP4BQ9H444 224 aaKnown RBP8.63□□□□□ -1.03
SPTA1-208ENST00000492934 KANSL2Q9H9L4 492 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 ZNF214Q9UL59 606 aaPredicted RBP8.63□□□□□ -1.03
SPTA1-208ENST00000492934 PPP1R9AQ9ULJ8 1098 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 COL11A1P12107 1806 aaPredicted RBP8.63□□□□□ -1.03
SPTA1-208ENST00000492934 EYSQ5T1H1 3165 aa8.63□□□□□ -1.03
SPTA1-208ENST00000492934 A0A1W2PQ45 241 aaPredicted RBP8.62□□□□□ -1.03
SPTA1-208ENST00000492934 A0A1W2PQY0 241 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 VWA5AO00534 786 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 SMARCA5O60264 1052 aaPredicted RBP8.62□□□□□ -1.03
SPTA1-208ENST00000492934 PGK1P00558 417 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 AKR1A1P14550 325 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 STAT3P40763 770 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 DIEXFQ68CQ4 756 aaKnown RBP8.62□□□□□ -1.03
SPTA1-208ENST00000492934 FAM109BQ6ICB4 259 aaPredicted RBP8.62□□□□□ -1.03
SPTA1-208ENST00000492934 SNRNP48Q6IEG0 339 aaKnown RBP8.62□□□□□ -1.03
SPTA1-208ENST00000492934 CTR9Q6PD62 1173 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 RNF180Q86T96 592 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.62□□□□□ -1.03
SPTA1-208ENST00000492934 TMEM151AQ8N4L1 468 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 GPATCH3Q96I76 525 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 SLF1Q9BQI6 1058 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 TINF2Q9BSI4 451 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 TEX13BQ9BXU2 312 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 NRBP1Q9UHY1 535 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 PHF24Q9UPV7 400 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 CNPY2Q9Y2B0 182 aa8.62□□□□□ -1.03
SPTA1-208ENST00000492934 SYNRGQ9UMZ2 1314 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 PQBP1O60828 265 aaKnown RBP8.61□□□□□ -1.03
SPTA1-208ENST00000492934 NDUFB10O96000 172 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 CLTBP09497 229 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 TAL1P17542 331 aaPredicted RBP8.61□□□□□ -1.03
SPTA1-208ENST00000492934 TDO2P48775 406 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 TLE2Q04725 743 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 SHHQ15465 462 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 QPCTQ16769 361 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 ZNF792Q3KQV3 632 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 TSHZ3Q63HK5 1081 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 MRPL14Q6P1L8 145 aaKnown RBP8.61□□□□□ -1.03
SPTA1-208ENST00000492934 SH3RF1Q7Z6J0 888 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 REPS2Q8NFH8 660 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 RNPC3Q96LT9 517 aaKnown RBP8.61□□□□□ -1.03
SPTA1-208ENST00000492934 FAM117AQ9C073 453 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 MKNK2Q9HBH9 465 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 ECHDC1Q9NTX5 307 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 ZHX1Q9UKY1 873 aaPredicted RBP8.61□□□□□ -1.03
SPTA1-208ENST00000492934 ADAMTS5Q9UNA0 930 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 CTDP1Q9Y5B0 961 aaPredicted RBP8.61□□□□□ -1.03
SPTA1-208ENST00000492934 CDH23Q9H251 3354 aa8.61□□□□□ -1.03
SPTA1-208ENST00000492934 PLXNA1Q9UIW2 1896 aa8.6□□□□□ -1.03
SPTA1-208ENST00000492934 TRIM43BA6NCK2 446 aa8.6□□□□□ -1.03
SPTA1-208ENST00000492934 MINDY4BA8MYZ0 360 aa8.6□□□□□ -1.03
SPTA1-208ENST00000492934 GPAA1O43292 621 aa8.6□□□□□ -1.03
SPTA1-208ENST00000492934 ZNF865P0CJ78 1059 aaPredicted RBP8.6□□□□□ -1.03
SPTA1-208ENST00000492934 RASA1P20936 1047 aa8.6□□□□□ -1.03
SPTA1-208ENST00000492934 CTHP32929 405 aa8.6□□□□□ -1.03
SPTA1-208ENST00000492934 C1orf53Q5VUE5 145 aa8.6□□□□□ -1.03
SPTA1-208ENST00000492934 LRRC47Q8N1G4 583 aaKnown RBP8.6□□□□□ -1.03
SPTA1-208ENST00000492934 KBTBD3Q8NAB2 608 aa8.6□□□□□ -1.03
SPTA1-208ENST00000492934 APPBP2Q92624 585 aa8.6□□□□□ -1.03
SPTA1-208ENST00000492934 TRIM43Q96BQ3 446 aaPredicted RBP8.6□□□□□ -1.03
SPTA1-208ENST00000492934 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms