RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 GHRHRQ02643 423 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 FUT2Q10981 343 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 LRRC41Q15345 812 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 CCDC144BQ3MJ40 725 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 CCSAPQ6IQ19 270 aaPredicted RBP8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 APOA5Q6Q788 366 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 Q6ZUG5 572 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 HOMER1Q86YM7 354 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 FANCBQ8NB91 859 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 KLHDC9Q8NEP7 349 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 PIBF1Q8WXW3 757 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 DPF3Q92784 378 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 TAAR1Q96RJ0 339 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 SPZ1Q9BXG8 430 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 AMNQ9BXJ7 453 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 AGXT2Q9BYV1 514 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 MAF1Q9H063 256 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 C11orf49Q9H6J7 331 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 ZHX1Q9UKY1 873 aaPredicted RBP8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 FAM184BQ9ULE4 1060 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 CNPY2Q9Y2B0 182 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 MRPL11Q9Y3B7 192 aaKnown RBP8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 PCDHA1Q9Y5I3 950 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 NR2E3Q9Y5X4 410 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 SLC12A7Q9Y666 1083 aa8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 ZNFX1Q9P2E3 1918 aaKnown RBP8.35□□□□□ -1.07
PDLIM1-204ENST00000492511 SMCHD1A6NHR9 2005 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 hCG_1642624A0A1W2PR95 340 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 MYADML2A6NDP7 307 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 DUSP11O75319 330 aaKnown RBP8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 CALM1P0DP23 149 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 CALM2P0DP24 149 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 CALM3P0DP25 149 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 RARBP10826 455 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 SMPD1P17405 629 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 CDC27P30260 824 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 KIF5BP33176 963 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 ADCYAP1R1P41586 468 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 HSD17B4P51659 736 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 NKX3-2P78367 333 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 APOBRQ0VD83 1088 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 LRRC26Q2I0M4 334 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 TMTC3Q6ZXV5 915 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 EEPD1Q7L9B9 569 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 MCF2L2Q86YR7 1114 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 FBXO16Q8IX29 292 aaPredicted RBP8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 FBXL16Q8N461 479 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 ARRDC4Q8NCT1 418 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 DNERQ8NFT8 737 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 CTCFLQ8NI51 663 aaPredicted RBP8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 LZTS2Q9BRK4 669 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 SENP6Q9GZR1 1112 aaPredicted RBP8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 ZSWIM6Q9HCJ5 1215 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 XPNPEP3Q9NQH7 507 aa8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 GNEQ9Y223 722 aaKnown RBP8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 RANBP2P49792 3224 aaKnown RBP8.34□□□□□ -1.07
PDLIM1-204ENST00000492511 SYNRGQ9UMZ2 1314 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 LOC102724159A0A0B4J2E5 919 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 KLF18A0A0U1RQI7 1052 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 RBM47A0AV96 593 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 H0YGN5 161 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 CFBP00751 764 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 CASTP20810 708 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 HOXA13P31271 388 aaPredicted RBP8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 GNAQP50148 359 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 GJA9P57773 515 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 TNFAIP2Q03169 654 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 TOB2Q14106 344 aaPredicted RBP8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 PWP2Q15269 919 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 BLOC1S2Q6QNY1 142 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 CHRDL2Q6WN34 429 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 RUFY3Q7L099 469 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 MICU3Q86XE3 530 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 CCDC82Q8N4S0 544 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 BRF1Q92994 677 aa8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 UPF3AQ9H1J1 476 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 ADD3Q9UEY8 706 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-204ENST00000492511 ZBTB43O43298 467 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 ARIH2O95376 493 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 PSMA5P28066 241 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 ADD1P35611 737 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 EVCP57679 992 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 RTN1Q16799 776 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 IQSEC1Q6DN90 963 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 SLC39A5Q6ZMH5 540 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 SYNE3Q6ZMZ3 975 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 NSUN6Q8TEA1 469 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 FERMT2Q96AC1 680 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 RRP36Q96EU6 259 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 IL17RAQ96F46 866 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 RMDN3Q96TC7 470 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 TSEN34Q9BSV6 310 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 TM6SF1Q9BZW5 370 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 VTA1Q9NP79 307 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 PXMP2Q9NR77 195 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 MAP3K20Q9NYL2 800 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 PHF24Q9UPV7 400 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 LCTP09848 1927 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 PLXNA1Q9UIW2 1896 aa8.32□□□□□ -1.08
PDLIM1-204ENST00000492511 CNTNAP5Q8WYK1 1306 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms