RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 Q3C1V9 767 aa12.3□□□□□ -0.44
ATF3-209ENST00000492118 NCAPG2Q86XI2 1143 aa12.3□□□□□ -0.44
ATF3-209ENST00000492118 SH3GLB2Q9NR46 395 aa12.3□□□□□ -0.44
ATF3-209ENST00000492118 ZNF214Q9UL59 606 aaPredicted RBP12.3□□□□□ -0.44
ATF3-209ENST00000492118 BRCA2P51587 3418 aa12.3□□□□□ -0.44
ATF3-209ENST00000492118 CCDC194A0A1B0GVG4 234 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 TTC36A6NLP5 189 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 SLC10A3P09131 477 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 CALML3P27482 149 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 GNA11P29992 359 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 HOXA7P31268 230 aaPredicted RBP12.29□□□□□ -0.44
ATF3-209ENST00000492118 STAT3P40763 770 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 APLP1P51693 650 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 DEFB115Q30KQ5 88 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 CLIC4Q9Y696 253 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 UNCXA6NJT0 531 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 U2AF2P26368 475 aaKnown RBP eCLIP12.29□□□□□ -0.44
ATF3-209ENST00000492118 MYSM1Q5VVJ2 828 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 USP28Q96RU2 1077 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 FOXP1Q9H334 677 aaPredicted RBP12.29□□□□□ -0.44
ATF3-209ENST00000492118 ZSCAN16Q9H4T2 348 aaPredicted RBP12.29□□□□□ -0.44
ATF3-209ENST00000492118 RIC8AQ9NPQ8 531 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 RNF146Q9NTX7 359 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 RBPJLQ9UBG7 517 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 CPA4Q9UI42 421 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 MRVI1Q9Y6F6 885 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 LOC285556D6RIA3 1793 aa12.29□□□□□ -0.44
ATF3-209ENST00000492118 MRPL12P52815 198 aaKnown RBP12.28□□□□□ -0.44
ATF3-209ENST00000492118 PABPC4Q13310 644 aaKnown RBP eCLIP12.28□□□□□ -0.442e-6■■■□□ 16.7
ATF3-209ENST00000492118 ZNF174Q15697 407 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 CEP120Q8N960 986 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 REPS2Q8NFH8 660 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 CAPNS2Q96L46 248 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 TEX13BQ9BXU2 312 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 PCDHB6Q9Y5E3 794 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 MEIS2O14770 477 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 PRPF40AO75400 957 aaKnown RBP12.28□□□□□ -0.44
ATF3-209ENST00000492118 MARCKSP29966 332 aaPredicted RBP12.28□□□□□ -0.44
ATF3-209ENST00000492118 MCM7P33993 719 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 TOB1P50616 345 aaPredicted RBP12.28□□□□□ -0.44
ATF3-209ENST00000492118 TAF1CQ15572 869 aaPredicted RBP12.28□□□□□ -0.44
ATF3-209ENST00000492118 LETM2Q2VYF4 491 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 LBX2Q6XYB7 198 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 TBCKQ8TEA7 893 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 CCDC102AQ96A19 550 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 SPATC1LQ9H0A9 340 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 MRPL11Q9Y3B7 192 aaKnown RBP12.28□□□□□ -0.44
ATF3-209ENST00000492118 ATP6V1DQ9Y5K8 247 aa12.28□□□□□ -0.44
ATF3-209ENST00000492118 SF3A1Q15459 793 aaKnown RBP12.27□□□□□ -0.45
ATF3-209ENST00000492118 NBPF20Q3BBV1 942 aa12.27□□□□□ -0.45
ATF3-209ENST00000492118 SLC30A10Q6XR72 485 aa12.27□□□□□ -0.45
ATF3-209ENST00000492118 BRAPQ7Z569 592 aa12.27□□□□□ -0.45
ATF3-209ENST00000492118 CLEC4DQ8WXI8 215 aa12.27□□□□□ -0.45
ATF3-209ENST00000492118 TNFRSF25Q93038 417 aa12.27□□□□□ -0.45
ATF3-209ENST00000492118 TRIM44Q96DX7 344 aaPredicted RBP12.27□□□□□ -0.45
ATF3-209ENST00000492118 PORCNQ9H237 461 aa12.27□□□□□ -0.45
ATF3-209ENST00000492118 CREBZFQ9NS37 354 aa12.27□□□□□ -0.45
ATF3-209ENST00000492118 ADAMTS5Q9UNA0 930 aa12.27□□□□□ -0.45
ATF3-209ENST00000492118 MANSC4A6NHS7 340 aaPredicted RBP12.26□□□□□ -0.45
ATF3-209ENST00000492118 SPDYE3A6NKU9 549 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 GCOM1H8Y6P7 765 aaPredicted RBP12.26□□□□□ -0.45
ATF3-209ENST00000492118 hCG_1984214I3L0E3 225 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 CNMDO75829 334 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 POLR2MP0CAP2 368 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 ERCC3P19447 782 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 NFKBIBQ15653 356 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 TSHZ1Q6ZSZ6 1077 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 ANKRD23Q86SG2 305 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 IFNL1Q8IU54 200 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 CCAR1Q8IX12 1150 aaKnown RBP12.26□□□□□ -0.45
ATF3-209ENST00000492118 ZNF713Q8N859 430 aaPredicted RBP12.26□□□□□ -0.45
ATF3-209ENST00000492118 BICD2Q8TD16 824 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 GJA10Q969M2 543 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 GBP4Q96PP9 640 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 MOV10L1Q9BXT6 1211 aaKnown RBP12.26□□□□□ -0.45
ATF3-209ENST00000492118 EFCC1Q9HA90 598 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 COL20A1Q9P218 1284 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 PNMA3Q9UL41 463 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 M0R2N6 131 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 CCNT1O60563 726 aaKnown RBP12.26□□□□□ -0.45
ATF3-209ENST00000492118 PGK2P07205 417 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 RPS6P62753 249 aaKnown RBP12.26□□□□□ -0.45
ATF3-209ENST00000492118 KRT85P78386 507 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 BAATQ14032 418 aaPredicted RBP12.26□□□□□ -0.45
ATF3-209ENST00000492118 NONOQ15233 471 aaKnown RBP eCLIP12.26□□□□□ -0.45
ATF3-209ENST00000492118 ANKRD35Q8N283 1001 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 SPATA32Q96LK8 384 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 ABCB11O95342 1321 aa12.26□□□□□ -0.45
ATF3-209ENST00000492118 ERVK-9P63128 1117 aa12.25□□□□□ -0.45
ATF3-209ENST00000492118 ERVK-24P63145 666 aa12.25□□□□□ -0.45
ATF3-209ENST00000492118 PPP1R18Q6NYC8 613 aa12.25□□□□□ -0.45
ATF3-209ENST00000492118 RNF207Q6ZRF8 634 aa12.25□□□□□ -0.45
ATF3-209ENST00000492118 ANO3Q9BYT9 981 aa12.25□□□□□ -0.45
ATF3-209ENST00000492118 HTTP42858 3142 aa12.25□□□□□ -0.45
ATF3-209ENST00000492118 ESYT2A0FGR8 921 aa12.25□□□□□ -0.45
ATF3-209ENST00000492118 GADD45BO75293 160 aaPredicted RBP12.25□□□□□ -0.45
ATF3-209ENST00000492118 EIF2AK2P19525 551 aaKnown RBP12.25□□□□□ -0.45
ATF3-209ENST00000492118 VEGFBP49765 207 aa12.25□□□□□ -0.45
ATF3-209ENST00000492118 CNTN2Q02246 1040 aa12.25□□□□□ -0.45
ATF3-209ENST00000492118 STK38Q15208 465 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms