RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ASPRV1Q53RT3 343 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 MUM1L1Q5H9M0 696 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 TJAP1Q5JTD0 557 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 MFSD5Q6N075 450 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 PSRC1Q6PGN9 363 aaPredicted RBP10.25□□□□□ -0.77
NUP50-217ENST00000491860 SH3RF1Q7Z6J0 888 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 MCF2L2Q86YR7 1114 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 TBC1D10CQ8IV04 446 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 PNMA1Q8ND90 353 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 ANKS1AQ92625 1134 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 UBAC1Q9BSL1 405 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 GPCPD1Q9NPB8 672 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 TBX21Q9UL17 535 aa10.25□□□□□ -0.77
NUP50-217ENST00000491860 LRRC37A2A6NM11 1700 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.24□□□□□ -0.77
NUP50-217ENST00000491860 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.24□□□□□ -0.77
NUP50-217ENST00000491860 RBM47A0AV96 593 aaKnown RBP10.24□□□□□ -0.77
NUP50-217ENST00000491860 MYADML2A6NDP7 307 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 TNFRSF10AO00220 468 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 DYNC1LI2O43237 492 aaPredicted RBP10.24□□□□□ -0.77
NUP50-217ENST00000491860 IGHDP01880 384 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 SUPT20HL2P0C7V6 817 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 SLC16A2P36021 539 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 PDE4DQ08499 809 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 TRDNQ13061 729 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 BAATQ14032 418 aaPredicted RBP10.24□□□□□ -0.77
NUP50-217ENST00000491860 DUSP28Q4G0W2 176 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 TTBK2Q6IQ55 1244 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 TAPT1Q6NXT6 567 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 KIAA1211Q6ZU35 1233 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 FAM126BQ8IXS8 530 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 SLC43A3Q8NBI5 491 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 EXOC6Q8TAG9 804 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 SCFD2Q8WU76 684 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 ZSCAN10Q96SZ4 725 aaPredicted RBP10.24□□□□□ -0.77
NUP50-217ENST00000491860 GPHNQ9NQX3 736 aaPredicted RBP10.24□□□□□ -0.77
NUP50-217ENST00000491860 ABCB11O95342 1321 aa10.24□□□□□ -0.77
NUP50-217ENST00000491860 FRMPD2Q68DX3 1309 aaPredicted RBP10.24□□□□□ -0.77
NUP50-217ENST00000491860 LCTP09848 1927 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 MYH6P13533 1939 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 NFIBO00712 420 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 CTAGE5O15320 804 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 ADCY6O43306 1168 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 KDM4AO75164 1064 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 CD4P01730 458 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 PARP1P09874 1014 aaKnown RBP10.23□□□□□ -0.77
NUP50-217ENST00000491860 SMPD1P17405 629 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 COL9A1P20849 921 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 SNAP25P60880 206 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 ITGA7Q13683 1181 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 FBXO16Q8IX29 292 aaPredicted RBP10.23□□□□□ -0.77
NUP50-217ENST00000491860 SAMD3Q8N6K7 520 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 CLEC4DQ8WXI8 215 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 CHMP4CQ96CF2 233 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 WDR11Q9BZH6 1224 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 MAP3K20Q9NYL2 800 aaKnown RBP10.23□□□□□ -0.77
NUP50-217ENST00000491860 NEDD4P46934 1319 aa10.23□□□□□ -0.77
NUP50-217ENST00000491860 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.22□□□□□ -0.77
NUP50-217ENST00000491860 ERICH2A1L162 156 aa10.22□□□□□ -0.77
NUP50-217ENST00000491860 PFKMP08237 780 aa10.22□□□□□ -0.77
NUP50-217ENST00000491860 EDNRBP24530 442 aa10.22□□□□□ -0.77
NUP50-217ENST00000491860 ITGB8P26012 769 aa10.22□□□□□ -0.77
NUP50-217ENST00000491860 CALML3P27482 149 aa10.22□□□□□ -0.77
NUP50-217ENST00000491860 RPS6P62753 249 aaKnown RBP10.22□□□□□ -0.77
NUP50-217ENST00000491860 BEX3Q00994 111 aa10.22□□□□□ -0.77
NUP50-217ENST00000491860 TTLL4Q14679 1199 aa10.22□□□□□ -0.77
NUP50-217ENST00000491860 SART3Q15020 963 aaKnown RBP10.22□□□□□ -0.77
NUP50-217ENST00000491860 PPP2R5BQ15173 497 aa10.22□□□□□ -0.77
NUP50-217ENST00000491860 IFIT1BQ5T764 474 aaKnown RBP10.22□□□□□ -0.77
NUP50-217ENST00000491860 CXCL17Q6UXB2 119 aa10.22□□□□□ -0.77
NUP50-217ENST00000491860 RPUSD2Q8IZ73 545 aaKnown RBP10.22□□□□□ -0.77
NUP50-217ENST00000491860 IWS1Q96ST2 819 aa10.22□□□□□ -0.77
NUP50-217ENST00000491860 ZSWIM5Q9P217 1185 aa10.22□□□□□ -0.77
NUP50-217ENST00000491860 MRPL11Q9Y3B7 192 aaKnown RBP10.22□□□□□ -0.77
NUP50-217ENST00000491860 U3KPZ7 1027 aaPredicted RBP10.22□□□□□ -0.77
NUP50-217ENST00000491860 TNKSO95271 1327 aa10.22□□□□□ -0.77
NUP50-217ENST00000491860 B4E1Z4 1266 aa10.21□□□□□ -0.77
NUP50-217ENST00000491860 DHX16O60231 1041 aaKnown RBP10.21□□□□□ -0.77
NUP50-217ENST00000491860 PTPN11Q06124 597 aaPredicted RBP10.21□□□□□ -0.77
NUP50-217ENST00000491860 CDC37Q16543 378 aaPredicted RBP10.21□□□□□ -0.77
NUP50-217ENST00000491860 TTC22Q5TAA0 569 aa10.21□□□□□ -0.77
NUP50-217ENST00000491860 EEPD1Q7L9B9 569 aa10.21□□□□□ -0.77
NUP50-217ENST00000491860 RASGRP2Q7LDG7 609 aa10.21□□□□□ -0.77
NUP50-217ENST00000491860 FBXO11Q86XK2 927 aa10.21□□□□□ -0.77
NUP50-217ENST00000491860 ENAHQ8N8S7 591 aaPredicted RBP10.21□□□□□ -0.77
NUP50-217ENST00000491860 OR6J1Q8NGC5 347 aa10.21□□□□□ -0.77
NUP50-217ENST00000491860 NSUN6Q8TEA1 469 aaKnown RBP10.21□□□□□ -0.77
NUP50-217ENST00000491860 ATXN2LQ8WWM7 1075 aaKnown RBP10.21□□□□□ -0.77
NUP50-217ENST00000491860 ZKSCAN3Q9BRR0 538 aa10.21□□□□□ -0.77
NUP50-217ENST00000491860 MTG1Q9BT17 334 aaPredicted RBP10.21□□□□□ -0.77
NUP50-217ENST00000491860 HIPK3Q9H422 1215 aa10.21□□□□□ -0.77
NUP50-217ENST00000491860 IL23AQ9NPF7 189 aa10.21□□□□□ -0.77
NUP50-217ENST00000491860 PDGFCQ9NRA1 345 aa10.21□□□□□ -0.77
NUP50-217ENST00000491860 ASTN1O14525 1302 aa10.21□□□□□ -0.78
NUP50-217ENST00000491860 DNAJB2P25686 324 aa10.2□□□□□ -0.78
NUP50-217ENST00000491860 EPHB4P54760 987 aa10.2□□□□□ -0.78
NUP50-217ENST00000491860 GRIN2CQ14957 1233 aa10.2□□□□□ -0.78
NUP50-217ENST00000491860 RAB30Q15771 203 aa10.2□□□□□ -0.78
NUP50-217ENST00000491860 STXBP2Q15833 593 aa10.2□□□□□ -0.78
NUP50-217ENST00000491860 USH1GQ495M9 461 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms