RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 EDNRBP24530 442 aa9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 IRX6P78412 446 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 PURAQ00577 322 aaKnown RBP9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 IKQ13123 557 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 RASGRP2Q7LDG7 609 aa9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 FBXO16Q8IX29 292 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 EXOC6Q8TAG9 804 aa9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 SLC28A3Q9HAS3 691 aa9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 HELLSQ9NRZ9 838 aa9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 CCPG1Q9ULG6 757 aa9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 YBX2Q9Y2T7 364 aaKnown RBP9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 ZMYM6O95789 1325 aa9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 PRRC2BQ5JSZ5 2229 aaKnown RBP9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 DOCK5Q9H7D0 1870 aa9.98□□□□□ -0.81
APOBEC3F-204ENST00000491387 NKRFO15226 690 aaKnown RBP eCLIP9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 IGHDP01880 384 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 SNHG28P0DPA3 235 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 TOP1P11387 765 aaKnown RBP9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 PTGS1P23219 599 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 RFC2P35250 354 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 CPT1AP50416 773 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 ALDH5A1P51649 535 aaPredicted RBP9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 CCL23P55773 120 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 PSMC6P62333 389 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 MRPS5P82675 430 aaKnown RBP9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 CTDSPL2Q05D32 466 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 PTPN11Q06124 597 aaPredicted RBP9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 BAATQ14032 418 aaPredicted RBP9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 TMEM63BQ5T3F8 832 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 SYDE2Q5VT97 1194 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 NSMFQ6X4W1 530 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 KIAA1211Q6ZU35 1233 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 EEPD1Q7L9B9 569 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 OTOP2Q7RTS6 562 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 RGS22Q8NE09 1264 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 CLEC4DQ8WXI8 215 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 CHMP4CQ96CF2 233 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 EVI5LQ96CN4 794 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 WDR11Q9BZH6 1224 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 NKX2-4Q9H2Z4 354 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 INCENPQ9NQS7 918 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 SLC4A7Q9Y6M7 1214 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 DDX49Q9Y6V7 483 aaKnown RBP9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 WDR19Q8NEZ3 1342 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 MYH7BA7E2Y1 1941 aa9.97□□□□□ -0.81
APOBEC3F-204ENST00000491387 A6NJR5 290 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 PITPNM1O00562 1244 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 NFIBO00712 420 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 RANBP6O60518 1105 aaKnown RBP9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 KPNA6O60684 536 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 PCP11498 1178 aaKnown RBP9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 NT5C2P49902 561 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 SNAP25P60880 206 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 ANKRD45Q5TZF3 282 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 VPS53Q5VIR6 699 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 TTBK2Q6IQ55 1244 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 B4GALNT3Q6L9W6 998 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 NFRKBQ6P4R8 1299 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 DNERQ8NFT8 737 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 PHOSPHO2Q8TCD6 241 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 TTC14Q96N46 770 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 PURBQ96QR8 312 aaKnown RBP9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 TMEM47Q9BQJ4 181 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 MTG1Q9BT17 334 aaPredicted RBP9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 LNPKQ9C0E8 428 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 ISY1Q9ULR0 285 aaKnown RBP9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 TNKSO95271 1327 aa9.96□□□□□ -0.82
APOBEC3F-204ENST00000491387 KIAA1217Q5T5P2 1943 aa9.95□□□□□ -0.82
APOBEC3F-204ENST00000491387 BRWD1Q9NSI6 2320 aa9.95□□□□□ -0.82
APOBEC3F-204ENST00000491387 FGAP02671 866 aa9.95□□□□□ -0.82
APOBEC3F-204ENST00000491387 PDHBP11177 359 aa9.95□□□□□ -0.82
APOBEC3F-204ENST00000491387 ATP2A2P16615 1042 aaKnown RBP9.95□□□□□ -0.82
APOBEC3F-204ENST00000491387 ZNF543Q08ER8 600 aa9.95□□□□□ -0.82
APOBEC3F-204ENST00000491387 CCDC96Q2M329 555 aa9.95□□□□□ -0.82
APOBEC3F-204ENST00000491387 BRDTQ58F21 947 aaPredicted RBP9.95□□□□□ -0.82
APOBEC3F-204ENST00000491387 ADAMTS19Q8TE59 1207 aa9.95□□□□□ -0.82
APOBEC3F-204ENST00000491387 SCFD2Q8WU76 684 aa9.95□□□□□ -0.82
APOBEC3F-204ENST00000491387 SCLYQ96I15 445 aa9.95□□□□□ -0.82
APOBEC3F-204ENST00000491387 TRMT13Q9NUP7 481 aaKnown RBP9.95□□□□□ -0.82
APOBEC3F-204ENST00000491387 BAZ2BQ9UIF8 2168 aaKnown RBP9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 TET1Q8NFU7 2136 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 RAD50Q92878 1312 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 A0A0D9SFI3 127 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 B4DLN1 442 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 HSPD1P10809 573 aaKnown RBP9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 CYP2C9P11712 490 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 BMP1P13497 986 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 SLC16A2P36021 539 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 MRPL12P52815 198 aaKnown RBP9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 RABGGTBP53611 331 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 RPS6P62753 249 aaKnown RBP9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 RBL2Q08999 1139 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 TTLL4Q14679 1199 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 NBPF20Q3BBV1 942 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 MCMDC2Q4G0Z9 681 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 PPP2R2DQ66LE6 453 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 SLC30A10Q6XR72 485 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 RNF207Q6ZRF8 634 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 FAM227BQ96M60 508 aa9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 SLC9A7Q96T83 725 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms