RNA–Protein interactions for RNA: ENST00000491229.1

PSMD1-212, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 2

Gene PSMD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-212ENST00000491229 PTPRAP18433 802 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 IBSPP21815 317 aaPredicted RBP5.7□□□□□ -1.5
PSMD1-212ENST00000491229 NME2P22392 152 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 CRKP46108 304 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 HUNKP57058 714 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 HNRNPUQ00839 825 aaKnown RBP eCLIP5.7□□□□□ -1.5
PSMD1-212ENST00000491229 KIF23Q02241 960 aaPredicted RBP5.7□□□□□ -1.5
PSMD1-212ENST00000491229 GRAPQ13588 217 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 SUZ12Q15022 739 aaKnown RBP5.7□□□□□ -1.5
PSMD1-212ENST00000491229 TCEAL1Q15170 157 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 SPRED3Q2MJR0 410 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 SEZ6Q53EL9 994 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 DPP8Q6V1X1 898 aaPredicted RBP5.7□□□□□ -1.5
PSMD1-212ENST00000491229 ZNF662Q6ZS27 426 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 NLRP10Q86W26 655 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 REXO1Q8N1G1 1221 aaKnown RBP5.7□□□□□ -1.5
PSMD1-212ENST00000491229 GRAPLQ8TC17 118 aaPredicted RBP5.7□□□□□ -1.5
PSMD1-212ENST00000491229 SHDQ96IW2 340 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 FERD3LQ96RJ6 166 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 SLC30A3Q99726 388 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 SPOCK3Q9BQ16 436 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 EMILIN2Q9BXX0 1053 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 BRINP2Q9C0B6 783 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 TMX4Q9H1E5 349 aaPredicted RBP5.7□□□□□ -1.5
PSMD1-212ENST00000491229 BABAM1Q9NWV8 329 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 RNF186Q9NXI6 227 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 ACTR10Q9NZ32 417 aa5.7□□□□□ -1.5
PSMD1-212ENST00000491229 SIN3BO75182 1162 aa5.69□□□□□ -1.5
PSMD1-212ENST00000491229 F13A1P00488 732 aa5.69□□□□□ -1.5
PSMD1-212ENST00000491229 EIF2AK2P19525 551 aaKnown RBP5.69□□□□□ -1.5
PSMD1-212ENST00000491229 FAAP100Q0VG06 881 aa5.69□□□□□ -1.5
PSMD1-212ENST00000491229 IFRD2Q12894 506 aaPredicted RBP5.69□□□□□ -1.5
PSMD1-212ENST00000491229 TCIRG1Q13488 830 aa5.69□□□□□ -1.5
PSMD1-212ENST00000491229 SF3B3Q15393 1217 aaKnown RBP5.69□□□□□ -1.5
PSMD1-212ENST00000491229 HSP90AB3PQ58FF7 597 aa5.69□□□□□ -1.5
PSMD1-212ENST00000491229 DLK2Q6UY11 383 aa5.69□□□□□ -1.5
PSMD1-212ENST00000491229 REC114Q7Z4M0 266 aa5.69□□□□□ -1.5
PSMD1-212ENST00000491229 RAB44Q7Z6P3 723 aaPredicted RBP5.69□□□□□ -1.5
PSMD1-212ENST00000491229 SULF2Q8IWU5 870 aa5.69□□□□□ -1.5
PSMD1-212ENST00000491229 HHIPQ96QV1 700 aa5.69□□□□□ -1.5
PSMD1-212ENST00000491229 UBE2OQ9C0C9 1292 aaKnown RBP5.69□□□□□ -1.5
PSMD1-212ENST00000491229 RASSF4Q9H2L5 321 aa5.69□□□□□ -1.5
PSMD1-212ENST00000491229 GBA2Q9HCG7 927 aaPredicted RBP5.69□□□□□ -1.5
PSMD1-212ENST00000491229 PRKAB1Q9Y478 270 aa5.69□□□□□ -1.5
PSMD1-212ENST00000491229 DUOX1Q9NRD9 1551 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 ANKRD36CQ5JPF3 1778 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 hCG_2014768A0A024R1R8 64 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 PSMD14O00487 310 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 SMAD7O15105 426 aaKnown RBP5.68□□□□□ -1.5
PSMD1-212ENST00000491229 PAGE1O75459 146 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 VIL1P09327 827 aaKnown RBP5.68□□□□□ -1.5
PSMD1-212ENST00000491229 HCLS1P14317 486 aaPredicted RBP5.68□□□□□ -1.5
PSMD1-212ENST00000491229 RPS12P25398 132 aaKnown RBP5.68□□□□□ -1.5
PSMD1-212ENST00000491229 GIPRP48546 466 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 DGKGP49619 791 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 PCDH1Q08174 1060 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 TRIM28Q13263 835 aaKnown RBP5.68□□□□□ -1.5
PSMD1-212ENST00000491229 DDR2Q16832 855 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 LLGL2Q6P1M3 1020 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 CCDC81Q6ZN84 652 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 DDX46Q7L014 1031 aaKnown RBP5.68□□□□□ -1.5
PSMD1-212ENST00000491229 COPS6Q7L5N1 327 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 FCHSD1Q86WN1 690 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 CACTIN-AS1Q8N1I8 211 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 MICALL1Q8N3F8 863 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 C2orf69Q8N8R5 385 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 THUMPD2Q9BTF0 503 aaKnown RBP5.68□□□□□ -1.5
PSMD1-212ENST00000491229 PLVAPQ9BX97 442 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 CCDC113Q9H0I3 377 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 SLKQ9H2G2 1235 aaPredicted RBP5.68□□□□□ -1.5
PSMD1-212ENST00000491229 PPT2Q9UMR5 302 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 MSRB2Q9Y3D2 182 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 SH3TC1Q8TE82 1336 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 PDE4DIPQ5VU43 2346 aa5.68□□□□□ -1.5
PSMD1-212ENST00000491229 ZNF609O15014 1411 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 FAM221AA4D161 298 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 TLR3O15455 904 aaKnown RBP5.67□□□□□ -1.5
PSMD1-212ENST00000491229 CILPO75339 1184 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 CDC45O75419 566 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 TRPA1O75762 1119 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 MCM4P33991 863 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 ZNF157P51786 506 aaPredicted RBP5.67□□□□□ -1.5
PSMD1-212ENST00000491229 ZNF280AP59817 542 aaPredicted RBP5.67□□□□□ -1.5
PSMD1-212ENST00000491229 FKBP1BP68106 108 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 ATP11AP98196 1134 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 AP3B2Q13367 1082 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 PKN2Q16513 984 aaKnown RBP5.67□□□□□ -1.5
PSMD1-212ENST00000491229 PTPROQ16827 1216 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 PROSER3Q2NL68 480 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 TBC1D10BQ4KMP7 808 aaPredicted RBP5.67□□□□□ -1.5
PSMD1-212ENST00000491229 PLEKHG4Q58EX7 1191 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 LINC00114Q6XXX2 140 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 BNC2Q6ZN30 1099 aaPredicted RBP5.67□□□□□ -1.5
PSMD1-212ENST00000491229 KRT26Q7Z3Y9 468 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 CTU1Q7Z7A3 348 aaKnown RBP5.67□□□□□ -1.5
PSMD1-212ENST00000491229 C19orf47Q8N9M1 422 aaKnown RBP5.67□□□□□ -1.5
PSMD1-212ENST00000491229 RBBP8NLQ8NC74 664 aaPredicted RBP5.67□□□□□ -1.5
PSMD1-212ENST00000491229 KCNB2Q92953 911 aa5.67□□□□□ -1.5
PSMD1-212ENST00000491229 DCPSQ96C86 337 aaKnown RBP5.67□□□□□ -1.5
PSMD1-212ENST00000491229 NACC1Q96RE7 527 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms