RNA–Protein interactions for RNA: ENST00000491160.1

PBX3-208, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-208ENST00000491160 TMEM57Q8N5G2 664 aa7.83□□□□□ -1.16
PBX3-208ENST00000491160 PCSK9Q8NBP7 692 aaKnown RBP7.83□□□□□ -1.16
PBX3-208ENST00000491160 CRBNQ96SW2 442 aa7.83□□□□□ -1.16
PBX3-208ENST00000491160 BCL11AQ9H165 835 aa7.83□□□□□ -1.16
PBX3-208ENST00000491160 TRPV6Q9H1D0 765 aa7.83□□□□□ -1.16
PBX3-208ENST00000491160 HIPK3Q9H422 1215 aa7.83□□□□□ -1.16
PBX3-208ENST00000491160 SH2D4AQ9H788 454 aa7.83□□□□□ -1.16
PBX3-208ENST00000491160 ARMT1Q9H993 441 aa7.83□□□□□ -1.16
PBX3-208ENST00000491160 SWAP70Q9UH65 585 aa7.83□□□□□ -1.16
PBX3-208ENST00000491160 SCN5AQ14524 2016 aa7.83□□□□□ -1.16
PBX3-208ENST00000491160 SYNGAP1Q96PV0 1343 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 VPS13AQ96RL7 3174 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.82□□□□□ -1.16
PBX3-208ENST00000491160 TCRBV5S4A2TA0A5A2 114 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 EPOPA6NHQ4 379 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 LRRC37A2A6NM11 1700 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 ZBBXA8MT70 800 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 ERC2O15083 957 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 CST5P28325 142 aaPredicted RBP7.82□□□□□ -1.16
PBX3-208ENST00000491160 CDK8P49336 464 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 AAK1Q2M2I8 961 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 TMEM31Q5JXX7 168 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 CXCL17Q6UXB2 119 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 MAMDC4Q6UXC1 1216 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 NUDT18Q6ZVK8 323 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 AACSQ86V21 672 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 ALYREFQ86V81 257 aaKnown RBP7.82□□□□□ -1.16
PBX3-208ENST00000491160 VWCEQ96DN2 955 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 SCLYQ96I15 445 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 FGD4Q96M96 766 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 UPF3AQ9H1J1 476 aaKnown RBP7.82□□□□□ -1.16
PBX3-208ENST00000491160 WNT8AQ9H1J5 351 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 SPC25Q9HBM1 224 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 C11orf16Q9NQ32 467 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 NOP58Q9Y2X3 529 aaKnown RBP7.82□□□□□ -1.16
PBX3-208ENST00000491160 MTCH2Q9Y6C9 303 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 SLC4A7Q9Y6M7 1214 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 DDX49Q9Y6V7 483 aaKnown RBP7.82□□□□□ -1.16
PBX3-208ENST00000491160 SPTBN4Q9H254 2564 aa7.82□□□□□ -1.16
PBX3-208ENST00000491160 GRIN2DO15399 1336 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 DNAJC25-GNG10A0A024R161 153 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 GOLIM4O00461 696 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 IPO8O15397 1037 aaKnown RBP7.81□□□□□ -1.16
PBX3-208ENST00000491160 TLL1O43897 1013 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 CHGBP05060 677 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 CA3P07451 260 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 COPB2P35606 906 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 PSMC6P62333 389 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 TTLL4Q14679 1199 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 NOL8Q76FK4 1167 aaKnown RBP7.81□□□□□ -1.16
PBX3-208ENST00000491160 ARMCX2Q7L311 632 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 CCDC144CPQ8IYA2 1237 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 STK11IPQ8N1F8 1099 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 ANKRD35Q8N283 1001 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 MSL3Q8N5Y2 521 aaKnown RBP7.81□□□□□ -1.16
PBX3-208ENST00000491160 DNAJC2Q99543 621 aaKnown RBP7.81□□□□□ -1.16
PBX3-208ENST00000491160 SLF1Q9BQI6 1058 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 NOC4LQ9BVI4 516 aaKnown RBP7.81□□□□□ -1.16
PBX3-208ENST00000491160 TEX13BQ9BXU2 312 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 KATNBL1Q9H079 304 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 MTIF3Q9H2K0 278 aaKnown RBP7.81□□□□□ -1.16
PBX3-208ENST00000491160 ABHD16BQ9H3Z7 469 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 RAVER2Q9HCJ3 691 aaKnown RBP7.81□□□□□ -1.16
PBX3-208ENST00000491160 GOPCQ9HD26 462 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 IL1RAPL2Q9NP60 686 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 EXOC6BQ9Y2D4 811 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 PCDHA11Q9Y5I1 949 aa7.81□□□□□ -1.16
PBX3-208ENST00000491160 ASTN1O14525 1302 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 ZFHX2Q9C0A1 2572 aaPredicted RBP7.8□□□□□ -1.16
PBX3-208ENST00000491160 USP17L12C9JPN9 530 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 USP17L21D6R901 530 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 RBAK-RBAKDNI3L0D1 243 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 B4GALT4O60513 344 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 ARHGEF15O94989 841 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 MBD4O95243 580 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 ATP2A2P16615 1042 aaKnown RBP7.8□□□□□ -1.16
PBX3-208ENST00000491160 CNTN2Q02246 1040 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 TNFAIP2Q03169 654 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 ITGA7Q13683 1181 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 TTF1Q15361 905 aaPredicted RBP7.8□□□□□ -1.16
PBX3-208ENST00000491160 TMEM67Q5HYA8 995 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 TMEM63BQ5T3F8 832 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 C12orf60Q5U649 245 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 C16orf86Q6ZW13 317 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 SPRED2Q7Z698 418 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 DEFB128Q7Z7B8 93 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 RPUSD2Q8IZ73 545 aaKnown RBP7.8□□□□□ -1.16
PBX3-208ENST00000491160 SLC43A3Q8NBI5 491 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 ARNTL2Q8WYA1 636 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 KIFC2Q96AC6 838 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 CCDC17Q96LX7 622 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.8□□□□□ -1.16
PBX3-208ENST00000491160 KANSL2Q9H9L4 492 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 CD320Q9NPF0 282 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 HOMER2Q9NSB8 354 aa7.8□□□□□ -1.16
PBX3-208ENST00000491160 ARIH1Q9Y4X5 557 aaPredicted RBP7.8□□□□□ -1.16
PBX3-208ENST00000491160 TET1Q8NFU7 2136 aa7.79□□□□□ -1.16
PBX3-208ENST00000491160 GRXCR2A6NFK2 248 aa7.79□□□□□ -1.16
PBX3-208ENST00000491160 F5H6K3 240 aa7.79□□□□□ -1.16
PBX3-208ENST00000491160 DYNC1LI2O43237 492 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms