RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 PRXQ9BXM0 1461 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 RAPGEF2Q9Y4G8 1499 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 CCNB3Q8WWL7 1395 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 KRTAP4-8A0A0G2JLE6 195 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 NOTOA8MTQ0 251 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 PRRG2O14669 202 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 NPHS1O60500 1241 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 DDAH1O94760 285 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 KCNH1O95259 989 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 FUCA1P04066 466 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 NAT2P11245 290 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 NCAM1P13591 858 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 IFNGR1P15260 489 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 LIMS1P48059 325 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 KCNC1P48547 511 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 CDR1P51861 262 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 FOXO4P98177 505 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 MVKQ03426 396 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 PLP2Q04941 152 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 COL9A2Q14055 689 aaPredicted RBP2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 NFIXQ14938 502 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 UBXN11Q5T124 520 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 EEF1DP3Q658K8 133 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 LARP1BQ659C4 914 aaKnown RBP2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 VHLLQ6RSH7 139 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 TTLL7Q6ZT98 887 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 TTLL10Q6ZVT0 673 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 SLCO6A1Q86UG4 719 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 C1QL4Q86Z23 238 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 MARCH10Q8NA82 808 aaPredicted RBP2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 TMEM52Q8NDY8 209 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 SIN3AQ96ST3 1273 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 HAUS7Q99871 368 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 BCAS3Q9H6U6 928 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 PHAXQ9H814 394 aaKnown RBP2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 CAPN10Q9HC96 672 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 GCM1Q9NP62 436 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 GPRC5CQ9NQ84 441 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 WHRNQ9P202 907 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 GULP1Q9UBP9 304 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 ACSL6Q9UKU0 697 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 ZNF214Q9UL59 606 aaPredicted RBP2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 MRVI1Q9Y6F6 885 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 TOP2BQ02880 1626 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 CUX2O14529 1486 aa2.77□□□□□ -1.97
SNRNP40-207ENST00000491106 A0A087WZG4 1122 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 OTOL1A6NHN0 477 aaPredicted RBP2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 MEIS3P2A8K0S8 358 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 FGF10O15520 208 aaPredicted RBP2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 SMARCA5O60264 1052 aaPredicted RBP2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 FOXD2O60548 495 aaPredicted RBP2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 CYBBP04839 570 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 EPHX1P07099 455 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 MSL3P1P0C860 447 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 SYN1P17600 705 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 MAPKAPK2P49137 400 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 ERVFRD-1P60508 538 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 YBX1P67809 324 aaKnown RBP2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 RTP2Q5QGT7 225 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 POMZP3Q6PJE2 187 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 PPFIBP1Q86W92 1011 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 SP8Q8IXZ3 490 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 CRACR2BQ8N4Y2 399 aaPredicted RBP2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 SYT8Q8NBV8 401 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 OR6P1Q8NGX9 317 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 DDX1Q92499 740 aaKnown RBP2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 PEX11GQ96HA9 241 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 PRR13Q9NZ81 148 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 MARCH2Q9P0N8 246 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 CDK11AQ9UQ88 783 aaPredicted RBP2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 PMF1-BGLAPU3KQ54 211 aa2.76□□□□□ -1.97
SNRNP40-207ENST00000491106 CARMIL1Q5VZK9 1371 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 BIVM-ERCC5R4GMW8 1640 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 SYNJ1O43426 1573 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 ZNF536O15090 1300 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 LTBP3Q9NS15 1303 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 TRBV23OR9-2A0A075B6M9 112 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 A0A1W2PQH9 124 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 ANKRD34BA5PLL1 514 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 NTRK1P04629 796 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 CELA3BP08861 270 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 DBHP09172 617 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 ECI1P42126 302 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 FAM50AQ14320 339 aaKnown RBP2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 PLEKHN1Q494U1 663 aaPredicted RBP2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 CD300LDQ6UXZ3 194 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 PRRT2Q7Z6L0 340 aaPredicted RBP2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 FAM129CQ86XR2 697 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 ADGRG2Q8IZP9 1017 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 DACT3Q96B18 629 aaPredicted RBP2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 ZBTB8AQ96BR9 441 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 TRMT2BQ96GJ1 504 aaKnown RBP2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 AP5M1Q9H0R1 490 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 ACBD3Q9H3P7 528 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 CLEC1BQ9P126 229 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 ZNF281Q9Y2X9 895 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 BACE2Q9Y5Z0 518 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 HCFC2Q9Y5Z7 792 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 ADAMTS20P59510 1910 aa2.75□□□□□ -1.97
SNRNP40-207ENST00000491106 RAB3GAP2Q9H2M9 1393 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms