RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 TSPY8P0CW00 308 aa16.22■□□□□ 0.19
CTDSP1-210ENST00000491064 SLC1A4P43007 532 aa16.22■□□□□ 0.19
CTDSP1-210ENST00000491064 DUSP28Q4G0W2 176 aa16.22■□□□□ 0.19
CTDSP1-210ENST00000491064 CHMP4CQ96CF2 233 aa16.22■□□□□ 0.19
CTDSP1-210ENST00000491064 PURBQ96QR8 312 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-210ENST00000491064 POLR3EQ9NVU0 708 aa16.22■□□□□ 0.19
CTDSP1-210ENST00000491064 DDX19BQ9UMR2 479 aa16.22■□□□□ 0.19
CTDSP1-210ENST00000491064 TRIP12Q14669 1992 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 RNF113AO15541 343 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 MS4A1P11836 297 aa16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 ACTN1P12814 892 aa16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 GNAT2P19087 354 aa16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 MCCP23508 829 aa16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 RFC2P35250 354 aa16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 SNAP25P60880 206 aa16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 PURAQ00577 322 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 TAP1Q03518 808 aa16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 TMEM31Q5JXX7 168 aa16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 PHOSPHO2Q8TCD6 241 aa16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 ARNTL2Q8WYA1 636 aa16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 LRRCC1Q9C099 1032 aa16.21■□□□□ 0.19
CTDSP1-210ENST00000491064 COL4A4P53420 1690 aaPredicted RBP16.21■□□□□ 0.18
CTDSP1-210ENST00000491064 M0R2C6 588 aa16.2■□□□□ 0.18
CTDSP1-210ENST00000491064 SMARCA5O60264 1052 aaPredicted RBP16.2■□□□□ 0.18
CTDSP1-210ENST00000491064 APPP05067 770 aa16.2■□□□□ 0.18
CTDSP1-210ENST00000491064 HNRNPUQ00839 825 aaKnown RBP eCLIP16.2■□□□□ 0.18
CTDSP1-210ENST00000491064 TFAP4Q01664 338 aa16.2■□□□□ 0.18
CTDSP1-210ENST00000491064 NSMFQ6X4W1 530 aa16.2■□□□□ 0.18
CTDSP1-210ENST00000491064 KCTD1Q719H9 257 aa16.2■□□□□ 0.18
CTDSP1-210ENST00000491064 HERC6Q8IVU3 1022 aa16.2■□□□□ 0.18
CTDSP1-210ENST00000491064 IFNL3Q8IZI9 196 aa16.2■□□□□ 0.18
CTDSP1-210ENST00000491064 HLA-CQ95604 372 aa16.2■□□□□ 0.18
CTDSP1-210ENST00000491064 WDR11Q9BZH6 1224 aa16.2■□□□□ 0.18
CTDSP1-210ENST00000491064 ECHDC1Q9NTX5 307 aa16.2■□□□□ 0.18
CTDSP1-210ENST00000491064 PRR12Q9ULL5 1215 aa16.2■□□□□ 0.18
CTDSP1-210ENST00000491064 PATL2C9JE40 543 aaKnown RBP16.19■□□□□ 0.18
CTDSP1-210ENST00000491064 PITPNM1O00562 1244 aa16.19■□□□□ 0.18
CTDSP1-210ENST00000491064 MYL3P08590 195 aa16.19■□□□□ 0.18
CTDSP1-210ENST00000491064 CPT1AP50416 773 aa16.19■□□□□ 0.18
CTDSP1-210ENST00000491064 PDE4BQ07343 736 aa16.19■□□□□ 0.18
CTDSP1-210ENST00000491064 GRB10Q13322 594 aa16.19■□□□□ 0.18
CTDSP1-210ENST00000491064 RASGRP2Q7LDG7 609 aa16.19■□□□□ 0.18
CTDSP1-210ENST00000491064 SPRED2Q7Z698 418 aa16.19■□□□□ 0.18
CTDSP1-210ENST00000491064 KHSRPQ92945 711 aaKnown RBP eCLIP16.19■□□□□ 0.18
CTDSP1-210ENST00000491064 MTG1Q9BT17 334 aaPredicted RBP16.19■□□□□ 0.18
CTDSP1-210ENST00000491064 C11orf16Q9NQ32 467 aa16.19■□□□□ 0.18
CTDSP1-210ENST00000491064 CCPG1Q9ULG6 757 aa16.19■□□□□ 0.18
CTDSP1-210ENST00000491064 RBM47A0AV96 593 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-210ENST00000491064 KIF28PB7ZC32 967 aa16.18■□□□□ 0.18
CTDSP1-210ENST00000491064 LPXNO60711 386 aa16.18■□□□□ 0.18
CTDSP1-210ENST00000491064 GPR37L1O60883 481 aa16.18■□□□□ 0.18
CTDSP1-210ENST00000491064 ZFYP08048 801 aaPredicted RBP16.18■□□□□ 0.18
CTDSP1-210ENST00000491064 IQCF3P0C7M6 154 aa16.18■□□□□ 0.18
CTDSP1-210ENST00000491064 ALDH5A1P51649 535 aaPredicted RBP16.18■□□□□ 0.18
CTDSP1-210ENST00000491064 NBPF20Q3BBV1 942 aa16.18■□□□□ 0.18
CTDSP1-210ENST00000491064 FAM47CQ5HY64 1035 aa16.18■□□□□ 0.18
CTDSP1-210ENST00000491064 RCSD1Q6JBY9 416 aa16.18■□□□□ 0.18
CTDSP1-210ENST00000491064 OR6J1Q8NGC5 347 aa16.18■□□□□ 0.18
CTDSP1-210ENST00000491064 ADD3Q9UEY8 706 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-210ENST00000491064 ICAM1P05362 532 aa16.17■□□□□ 0.18
CTDSP1-210ENST00000491064 BAATQ14032 418 aaPredicted RBP16.17■□□□□ 0.18
CTDSP1-210ENST00000491064 PPP4R3BQ5MIZ7 849 aa16.17■□□□□ 0.18
CTDSP1-210ENST00000491064 NFRKBQ6P4R8 1299 aa16.17■□□□□ 0.18
CTDSP1-210ENST00000491064 RETREG2Q8NC44 543 aa16.17■□□□□ 0.18
CTDSP1-210ENST00000491064 PPP1R13LQ8WUF5 828 aa16.17■□□□□ 0.18
CTDSP1-210ENST00000491064 FTOQ9C0B1 505 aaKnown RBP eCLIP16.17■□□□□ 0.18
CTDSP1-210ENST00000491064 GPHNQ9NQX3 736 aaPredicted RBP16.17■□□□□ 0.18
CTDSP1-210ENST00000491064 STX8Q9UNK0 236 aa16.17■□□□□ 0.18
CTDSP1-210ENST00000491064 LOC102724159A0A0B4J2E5 919 aa16.16■□□□□ 0.18
CTDSP1-210ENST00000491064 FAM86C2PA6NEL3 165 aa16.16■□□□□ 0.18
CTDSP1-210ENST00000491064 BAIAP3O94812 1187 aa16.16■□□□□ 0.18
CTDSP1-210ENST00000491064 SLC3A2P08195 630 aaKnown RBP16.16■□□□□ 0.18
CTDSP1-210ENST00000491064 PPARAQ07869 468 aa16.16■□□□□ 0.18
CTDSP1-210ENST00000491064 PWP2Q15269 919 aaKnown RBP16.16■□□□□ 0.18
CTDSP1-210ENST00000491064 TSHZ3Q63HK5 1081 aa16.16■□□□□ 0.18
CTDSP1-210ENST00000491064 NACAP1Q9BZK3 213 aa16.16■□□□□ 0.18
CTDSP1-210ENST00000491064 RANBP17Q9H2T7 1088 aaKnown RBP16.16■□□□□ 0.18
CTDSP1-210ENST00000491064 LCHNA4D1U4 455 aa16.15■□□□□ 0.18
CTDSP1-210ENST00000491064 NFIBO00712 420 aa16.15■□□□□ 0.18
CTDSP1-210ENST00000491064 NMT2O60551 498 aa16.15■□□□□ 0.18
CTDSP1-210ENST00000491064 PTPN11Q06124 597 aaPredicted RBP16.15■□□□□ 0.18
CTDSP1-210ENST00000491064 BFSP2Q13515 415 aa16.15■□□□□ 0.18
CTDSP1-210ENST00000491064 BRDTQ58F21 947 aaPredicted RBP16.15■□□□□ 0.18
CTDSP1-210ENST00000491064 SEC62Q99442 399 aaKnown RBP16.15■□□□□ 0.18
CTDSP1-210ENST00000491064 NAPBQ9H115 298 aa16.15■□□□□ 0.18
CTDSP1-210ENST00000491064 CD320Q9NPF0 282 aa16.15■□□□□ 0.18
CTDSP1-210ENST00000491064 IL17RBQ9NRM6 502 aa16.15■□□□□ 0.18
CTDSP1-210ENST00000491064 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.15■□□□□ 0.18
CTDSP1-210ENST00000491064 A6NJR5 290 aa16.14■□□□□ 0.17
CTDSP1-210ENST00000491064 PI4K2BG5E9Z4 385 aa16.14■□□□□ 0.17
CTDSP1-210ENST00000491064 NKRFO15226 690 aaKnown RBP eCLIP16.14■□□□□ 0.171e-7■□□□□ 11.3
CTDSP1-210ENST00000491064 KCNJ6P48051 423 aa16.14■□□□□ 0.17
CTDSP1-210ENST00000491064 GDPD5Q8WTR4 605 aa16.14■□□□□ 0.17
CTDSP1-210ENST00000491064 GPATCH3Q96I76 525 aa16.14■□□□□ 0.17
CTDSP1-210ENST00000491064 CHMP4BQ9H444 224 aaKnown RBP16.14■□□□□ 0.17
CTDSP1-210ENST00000491064 LMCD1Q9NZU5 365 aa16.14■□□□□ 0.17
CTDSP1-210ENST00000491064 MTMR7Q9Y216 660 aa16.14■□□□□ 0.17
CTDSP1-210ENST00000491064 RAD50Q92878 1312 aa16.14■□□□□ 0.17
CTDSP1-210ENST00000491064 SIP14410 1827 aa16.13■□□□□ 0.17
CTDSP1-210ENST00000491064 PTPDC1A2A3K4 754 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms