RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 NEDD1Q8NHV4 660 aa18.21■□□□□ 0.51
SCAMP3-208ENST00000490999 STAG1Q8WVM7 1258 aa18.21■□□□□ 0.51
SCAMP3-208ENST00000490999 GMCL1Q96IK5 515 aa18.21■□□□□ 0.51
SCAMP3-208ENST00000490999 LRRCC1Q9C099 1032 aa18.21■□□□□ 0.51
SCAMP3-208ENST00000490999 ZNF287Q9HBT7 754 aa18.21■□□□□ 0.51
SCAMP3-208ENST00000490999 VTA1Q9NP79 307 aa18.21■□□□□ 0.51
SCAMP3-208ENST00000490999 ECHDC1Q9NTX5 307 aa18.21■□□□□ 0.51
SCAMP3-208ENST00000490999 CCPG1Q9ULG6 757 aa18.21■□□□□ 0.51
SCAMP3-208ENST00000490999 SCN5AQ14524 2016 aa18.21■□□□□ 0.51
SCAMP3-208ENST00000490999 RNF113AO15541 343 aaKnown RBP18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 NMT2O60551 498 aa18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 PFKMP08237 780 aa18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 TFAP4Q01664 338 aa18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 GRB10Q13322 594 aa18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 TKFCQ3LXA3 575 aa18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 CHURC1Q8WUH1 139 aa18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 SLC9A7Q96T83 725 aa18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 SEC62Q99442 399 aaKnown RBP18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 SEZ6LQ9BYH1 1024 aa18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 C11orf16Q9NQ32 467 aa18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 PRR12Q9ULL5 1215 aa18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 DDX19BQ9UMR2 479 aa18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 STX8Q9UNK0 236 aa18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 TANC1Q9C0D5 1861 aa18.2■□□□□ 0.5
SCAMP3-208ENST00000490999 TLL1O43897 1013 aa18.19■□□□□ 0.5
SCAMP3-208ENST00000490999 FDX1P10109 184 aa18.19■□□□□ 0.5
SCAMP3-208ENST00000490999 ACTN1P12814 892 aa18.19■□□□□ 0.5
SCAMP3-208ENST00000490999 DUSP28Q4G0W2 176 aa18.19■□□□□ 0.5
SCAMP3-208ENST00000490999 TMEM31Q5JXX7 168 aa18.19■□□□□ 0.5
SCAMP3-208ENST00000490999 HERC6Q8IVU3 1022 aa18.19■□□□□ 0.5
SCAMP3-208ENST00000490999 IFNL3Q8IZI9 196 aa18.19■□□□□ 0.5
SCAMP3-208ENST00000490999 OR6J1Q8NGC5 347 aa18.19■□□□□ 0.5
SCAMP3-208ENST00000490999 GDPD5Q8WTR4 605 aa18.19■□□□□ 0.5
SCAMP3-208ENST00000490999 WDR11Q9BZH6 1224 aa18.19■□□□□ 0.5
SCAMP3-208ENST00000490999 FTOQ9C0B1 505 aaKnown RBP eCLIP18.19■□□□□ 0.5
SCAMP3-208ENST00000490999 Q9Y3F1 56 aa18.19■□□□□ 0.5
SCAMP3-208ENST00000490999 LCHNA4D1U4 455 aa18.18■□□□□ 0.5
SCAMP3-208ENST00000490999 NFIBO00712 420 aa18.18■□□□□ 0.5
SCAMP3-208ENST00000490999 SUPT20HL2P0C7V6 817 aa18.18■□□□□ 0.5
SCAMP3-208ENST00000490999 POU3F3P20264 500 aaPredicted RBP18.18■□□□□ 0.5
SCAMP3-208ENST00000490999 ALDH5A1P51649 535 aaPredicted RBP18.18■□□□□ 0.5
SCAMP3-208ENST00000490999 CHMP4BP1P59074 171 aa18.18■□□□□ 0.5
SCAMP3-208ENST00000490999 CCDC96Q2M329 555 aa18.18■□□□□ 0.5
SCAMP3-208ENST00000490999 NBPF20Q3BBV1 942 aa18.18■□□□□ 0.5
SCAMP3-208ENST00000490999 SLC30A10Q6XR72 485 aa18.18■□□□□ 0.5
SCAMP3-208ENST00000490999 HLA-CQ95604 372 aa18.18■□□□□ 0.5
SCAMP3-208ENST00000490999 POLR3EQ9NVU0 708 aa18.18■□□□□ 0.5
SCAMP3-208ENST00000490999 COG5Q9UP83 839 aa18.18■□□□□ 0.5
SCAMP3-208ENST00000490999 LPXNO60711 386 aa18.17■□□□□ 0.5
SCAMP3-208ENST00000490999 GNAT2P19087 354 aa18.17■□□□□ 0.5
SCAMP3-208ENST00000490999 CPT1AP50416 773 aa18.17■□□□□ 0.5
SCAMP3-208ENST00000490999 PDE4BQ07343 736 aa18.17■□□□□ 0.5
SCAMP3-208ENST00000490999 PPARAQ07869 468 aa18.17■□□□□ 0.5
SCAMP3-208ENST00000490999 BAATQ14032 418 aaPredicted RBP18.17■□□□□ 0.5
SCAMP3-208ENST00000490999 MORC4Q8TE76 937 aa18.17■□□□□ 0.5
SCAMP3-208ENST00000490999 MTG1Q9BT17 334 aaPredicted RBP18.17■□□□□ 0.5
SCAMP3-208ENST00000490999 INCENPQ9NQS7 918 aa18.17■□□□□ 0.5
SCAMP3-208ENST00000490999 MTUS1Q9ULD2 1270 aa18.17■□□□□ 0.5
SCAMP3-208ENST00000490999 PIEZO1Q92508 2521 aa18.17■□□□□ 0.5
SCAMP3-208ENST00000490999 PTPDC1A2A3K4 754 aa18.16■□□□□ 0.5
SCAMP3-208ENST00000490999 ICAM1P05362 532 aa18.16■□□□□ 0.5
SCAMP3-208ENST00000490999 IQCF3P0C7M6 154 aa18.16■□□□□ 0.5
SCAMP3-208ENST00000490999 SLC16A2P36021 539 aa18.16■□□□□ 0.5
SCAMP3-208ENST00000490999 COPS5Q92905 334 aa18.16■□□□□ 0.5
SCAMP3-208ENST00000490999 NAPBQ9H115 298 aa18.16■□□□□ 0.5
SCAMP3-208ENST00000490999 CD320Q9NPF0 282 aa18.16■□□□□ 0.5
SCAMP3-208ENST00000490999 GPHNQ9NQX3 736 aaPredicted RBP18.16■□□□□ 0.5
SCAMP3-208ENST00000490999 PATL2C9JE40 543 aaKnown RBP18.15■□□□□ 0.5
SCAMP3-208ENST00000490999 CALML3P27482 149 aa18.15■□□□□ 0.5
SCAMP3-208ENST00000490999 RFC2P35250 354 aa18.15■□□□□ 0.5
SCAMP3-208ENST00000490999 CTDSPL2Q05D32 466 aa18.15■□□□□ 0.5
SCAMP3-208ENST00000490999 TTBK2Q6IQ55 1244 aa18.15■□□□□ 0.5
SCAMP3-208ENST00000490999 NACAP1Q9BZK3 213 aa18.15■□□□□ 0.5
SCAMP3-208ENST00000490999 IL17RBQ9NRM6 502 aa18.15■□□□□ 0.5
SCAMP3-208ENST00000490999 MUC6Q6W4X9 2439 aa18.15■□□□□ 0.5
SCAMP3-208ENST00000490999 TSPY2A6NKD2 308 aa18.14■□□□□ 0.49
SCAMP3-208ENST00000490999 PITPNM1O00562 1244 aa18.14■□□□□ 0.49
SCAMP3-208ENST00000490999 MS4A1P11836 297 aa18.14■□□□□ 0.49
SCAMP3-208ENST00000490999 PPP2R5BQ15173 497 aa18.14■□□□□ 0.49
SCAMP3-208ENST00000490999 RCSD1Q6JBY9 416 aa18.14■□□□□ 0.49
SCAMP3-208ENST00000490999 RETREG2Q8NC44 543 aa18.14■□□□□ 0.49
SCAMP3-208ENST00000490999 PHOSPHO2Q8TCD6 241 aa18.14■□□□□ 0.49
SCAMP3-208ENST00000490999 RANBP17Q9H2T7 1088 aaKnown RBP18.14■□□□□ 0.49
SCAMP3-208ENST00000490999 NOD1Q9Y239 953 aa18.14■□□□□ 0.49
SCAMP3-208ENST00000490999 FRMPD2Q68DX3 1309 aaPredicted RBP18.14■□□□□ 0.49
SCAMP3-208ENST00000490999 KIF28PB7ZC32 967 aa18.13■□□□□ 0.49
SCAMP3-208ENST00000490999 PLA2G6O60733 806 aa18.13■□□□□ 0.49
SCAMP3-208ENST00000490999 ZFYP08048 801 aaPredicted RBP18.13■□□□□ 0.49
SCAMP3-208ENST00000490999 SLC3A2P08195 630 aaKnown RBP18.13■□□□□ 0.49
SCAMP3-208ENST00000490999 KCNJ6P48051 423 aa18.13■□□□□ 0.49
SCAMP3-208ENST00000490999 WDR5P61964 334 aaKnown RBP18.13■□□□□ 0.49
SCAMP3-208ENST00000490999 DEFB103AP81534 67 aa18.13■□□□□ 0.49
SCAMP3-208ENST00000490999 GPATCH3Q96I76 525 aa18.13■□□□□ 0.49
SCAMP3-208ENST00000490999 ADD3Q9UEY8 706 aaKnown RBP18.13■□□□□ 0.49
SCAMP3-208ENST00000490999 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.13■□□□□ 0.49
SCAMP3-208ENST00000490999 PTPRSQ13332 1948 aa18.12■□□□□ 0.49
SCAMP3-208ENST00000490999 SCN10AQ9Y5Y9 1956 aa18.12■□□□□ 0.49
SCAMP3-208ENST00000490999 RBM47A0AV96 593 aaKnown RBP18.12■□□□□ 0.49
SCAMP3-208ENST00000490999 FOXP2O15409 715 aa18.12■□□□□ 0.49
SCAMP3-208ENST00000490999 TCTN1Q2MV58 587 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms