RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 FGFR2P21802 821 aa21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 RFC4P35249 363 aa21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 MATR3P43243 847 aaKnown RBP eCLIP21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 PSEN1P49768 467 aa21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 ZBED6P86452 979 aa21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 NUP58Q9BVL2 599 aa21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 STIM2Q9P246 746 aa21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 LRWD1Q9UFC0 647 aa21.53■■□□□ 1.04
SNAPC3-206ENST00000490969 LAMB2P55268 1798 aa21.52■■□□□ 1.04
SNAPC3-206ENST00000490969 RASSF10A6NK89 507 aa21.52■■□□□ 1.04
SNAPC3-206ENST00000490969 NPY5RQ15761 445 aa21.52■■□□□ 1.04
SNAPC3-206ENST00000490969 NBPF5PQ86XG9 351 aaPredicted RBP21.52■■□□□ 1.04
SNAPC3-206ENST00000490969 RETREG2Q8NC44 543 aa21.52■■□□□ 1.04
SNAPC3-206ENST00000490969 CELF1Q92879 486 aaKnown RBP21.52■■□□□ 1.04
SNAPC3-206ENST00000490969 TRIM47Q96LD4 638 aa21.52■■□□□ 1.04
SNAPC3-206ENST00000490969 RNF41Q9H4P4 317 aaPredicted RBP21.52■■□□□ 1.04
SNAPC3-206ENST00000490969 EXOC1Q9NV70 894 aa21.52■■□□□ 1.04
SNAPC3-206ENST00000490969 CAPN6Q9Y6Q1 641 aa21.52■■□□□ 1.04
SNAPC3-206ENST00000490969 SLC4A4Q9Y6R1 1079 aa21.52■■□□□ 1.04
SNAPC3-206ENST00000490969 TNKSO95271 1327 aa21.52■■□□□ 1.04
SNAPC3-206ENST00000490969 TACC1O75410 805 aa21.52■■□□□ 1.03
SNAPC3-206ENST00000490969 KLK7P49862 253 aa21.52■■□□□ 1.03
SNAPC3-206ENST00000490969 ATP1A2P50993 1020 aa21.52■■□□□ 1.03
SNAPC3-206ENST00000490969 SEC23AQ15436 765 aa21.52■■□□□ 1.03
SNAPC3-206ENST00000490969 LCORLQ8N3X6 602 aa21.52■■□□□ 1.03
SNAPC3-206ENST00000490969 SH2D3CQ8N5H7 860 aa21.52■■□□□ 1.03
SNAPC3-206ENST00000490969 A1CFQ9NQ94 594 aaKnown RBP21.52■■□□□ 1.03
SNAPC3-206ENST00000490969 ZNF263O14978 683 aa21.51■■□□□ 1.03
SNAPC3-206ENST00000490969 PRLRP16471 622 aa21.51■■□□□ 1.03
SNAPC3-206ENST00000490969 DDR1Q08345 913 aa21.51■■□□□ 1.03
SNAPC3-206ENST00000490969 CCDC96Q2M329 555 aa21.51■■□□□ 1.03
SNAPC3-206ENST00000490969 HAUS3Q68CZ6 603 aa21.51■■□□□ 1.03
SNAPC3-206ENST00000490969 SPATA5Q8NB90 893 aa21.51■■□□□ 1.03
SNAPC3-206ENST00000490969 ZIM3Q96PE6 472 aa21.51■■□□□ 1.03
SNAPC3-206ENST00000490969 PLEKHA8P1O95397 391 aa21.51■■□□□ 1.03
SNAPC3-206ENST00000490969 CCDC172P0C7W6 258 aa21.51■■□□□ 1.03
SNAPC3-206ENST00000490969 NNTQ13423 1086 aa21.51■■□□□ 1.03
SNAPC3-206ENST00000490969 NFIXQ14938 502 aa21.51■■□□□ 1.03
SNAPC3-206ENST00000490969 SPA17Q15506 151 aa21.51■■□□□ 1.03
SNAPC3-206ENST00000490969 ZEB2O60315 1214 aa21.5■■□□□ 1.03
SNAPC3-206ENST00000490969 GNAT2P19087 354 aa21.5■■□□□ 1.03
SNAPC3-206ENST00000490969 TNFRSF8P28908 595 aa21.5■■□□□ 1.03
SNAPC3-206ENST00000490969 KCTD16Q68DU8 428 aa21.5■■□□□ 1.03
SNAPC3-206ENST00000490969 OSBPL9Q96SU4 736 aa21.5■■□□□ 1.03
SNAPC3-206ENST00000490969 TUBGCP2Q9BSJ2 902 aa21.5■■□□□ 1.03
SNAPC3-206ENST00000490969 MCM7P33993 719 aa21.5■■□□□ 1.03
SNAPC3-206ENST00000490969 STAT6P42226 847 aa21.5■■□□□ 1.03
SNAPC3-206ENST00000490969 CDK17Q00537 523 aa21.5■■□□□ 1.03
SNAPC3-206ENST00000490969 CHRNDQ07001 517 aa21.5■■□□□ 1.03
SNAPC3-206ENST00000490969 KRT26Q7Z3Y9 468 aa21.5■■□□□ 1.03
SNAPC3-206ENST00000490969 JPH2Q9BR39 696 aaPredicted RBP21.5■■□□□ 1.03
SNAPC3-206ENST00000490969 UBR3Q6ZT12 1888 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 MROH5Q6ZUA9 1318 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 USO1O60763 962 aaKnown RBP21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 TBC1D8BQ0IIM8 1120 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 SF3B3Q15393 1217 aaKnown RBP21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 NFRKBQ6P4R8 1299 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 KDM7AQ6ZMT4 941 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 MICALCLQ6ZW33 695 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 RPAINQ86UA6 219 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 CCDC42Q96M95 316 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 PAGR1Q9BTK6 254 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 SH2D4AQ9H788 454 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 MLXIPQ9HAP2 919 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 SMARCAL1Q9NZC9 954 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 RGS17Q9UGC6 210 aaPredicted RBP21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 PSMA7O14818 248 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 KRT14P02533 472 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 TCP1P17987 556 aaKnown RBP21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 LSP1P33241 339 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 NAP1L1P55209 391 aaKnown RBP21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 PUM3Q15397 648 aaKnown RBP21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 CCDC181Q5TID7 509 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 NAA35Q5VZE5 725 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 YTHDF3Q7Z739 585 aaKnown RBP21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 EPN3Q9H201 632 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 HYOU1Q9Y4L1 999 aa21.49■■□□□ 1.03
SNAPC3-206ENST00000490969 IGHMBP2P38935 993 aaKnown RBP21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 TXNRD1Q16881 649 aa21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 SLC10A5Q5PT55 438 aa21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 TTI2Q6NXR4 508 aa21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 PIK3AP1Q6ZUJ8 805 aa21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 RNPC3Q96LT9 517 aaKnown RBP21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 PCMTD1Q96MG8 357 aaPredicted RBP21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 COL24A1Q17RW2 1714 aa21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 PNPLA7Q6ZV29 1317 aa21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 MYH10P35580 1976 aa21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 MOCS3O95396 460 aa21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 C8orf74Q6P047 294 aa21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 NOC3LQ8WTT2 800 aaKnown RBP21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 PSMB7Q99436 277 aa21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 IFIH1Q9BYX4 1025 aaKnown RBP21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 DONSONQ9NYP3 566 aa21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 EHD2Q9NZN4 543 aa21.48■■□□□ 1.03
SNAPC3-206ENST00000490969 DOCK2Q92608 1830 aa21.47■■□□□ 1.03
SNAPC3-206ENST00000490969 CXCR5P32302 372 aa21.47■■□□□ 1.03
SNAPC3-206ENST00000490969 TRAPPC10P48553 1259 aa21.47■■□□□ 1.03
SNAPC3-206ENST00000490969 BCAMP50895 628 aa21.47■■□□□ 1.03
SNAPC3-206ENST00000490969 RASGRF1Q13972 1273 aa21.47■■□□□ 1.03
SNAPC3-206ENST00000490969 KCNB1Q14721 858 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms