RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 DCP1AQ9NPI6 582 aaPredicted RBP10.87□□□□□ -0.67
SRRM1-217ENST00000490543 ATP13A2Q9NQ11 1180 aa10.87□□□□□ -0.67
SRRM1-217ENST00000490543 NRBP1Q9UHY1 535 aa10.87□□□□□ -0.67
SRRM1-217ENST00000490543 TBX21Q9UL17 535 aa10.87□□□□□ -0.67
SRRM1-217ENST00000490543 ADAMTS5Q9UNA0 930 aa10.87□□□□□ -0.67
SRRM1-217ENST00000490543 TMX2Q9Y320 296 aa10.87□□□□□ -0.67
SRRM1-217ENST00000490543 MYADML2A6NDP7 307 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 DCDC2CA8MYV0 355 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 SLC25A27O95847 323 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 ACRP10323 421 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 PDE6AP16499 860 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 ADGRE1Q14246 886 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 CCDC85BQ15834 202 aaPredicted RBP10.86□□□□□ -0.67
SRRM1-217ENST00000490543 KCNA10Q16322 511 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 SLFNL1Q499Z3 407 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 TMEM240Q5SV17 173 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 SLC9C2Q5TAH2 1124 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 CCSAPQ6IQ19 270 aaPredicted RBP10.86□□□□□ -0.67
SRRM1-217ENST00000490543 RIOX2Q8IUF8 465 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 LCORLQ8N3X6 602 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 KLHDC9Q8NEP7 349 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 ASB2Q96Q27 587 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 TSEN34Q9BSV6 310 aaKnown RBP10.86□□□□□ -0.67
SRRM1-217ENST00000490543 CRNKL1Q9BZJ0 848 aaKnown RBP10.86□□□□□ -0.67
SRRM1-217ENST00000490543 STARD7Q9NQZ5 370 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 CHD9Q3L8U1 2897 aa10.86□□□□□ -0.67
SRRM1-217ENST00000490543 SYNRGQ9UMZ2 1314 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 CYP2D7A0A087X1C5 515 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 WDR46O15213 610 aaKnown RBP10.85□□□□□ -0.67
SRRM1-217ENST00000490543 PRKAB2O43741 272 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 SNAI1O95863 264 aaPredicted RBP10.85□□□□□ -0.67
SRRM1-217ENST00000490543 AKR1A1P14550 325 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 CSF2RAP15509 400 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 STAT3P40763 770 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 ICA1Q05084 483 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 KCTD2Q14681 263 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 C4orf48Q5BLP8 95 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 RASIP1Q5U651 963 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 MFSD5Q6N075 450 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 CCDC129Q6ZRS4 1044 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 AACSQ86V21 672 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 FAM174AQ8TBP5 190 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 ADAMTS19Q8TE59 1207 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 ATXN2LQ8WWM7 1075 aaKnown RBP10.85□□□□□ -0.67
SRRM1-217ENST00000490543 GAS2L1Q99501 681 aaPredicted RBP10.85□□□□□ -0.67
SRRM1-217ENST00000490543 ARHGEF10LQ9HCE6 1279 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 ZNF214Q9UL59 606 aaPredicted RBP10.85□□□□□ -0.67
SRRM1-217ENST00000490543 DIS3Q9Y2L1 958 aaKnown RBP10.85□□□□□ -0.67
SRRM1-217ENST00000490543 COL11A1P12107 1806 aaPredicted RBP10.85□□□□□ -0.67
SRRM1-217ENST00000490543 PLXNA1Q9UIW2 1896 aa10.85□□□□□ -0.67
SRRM1-217ENST00000490543 ZNF532Q9HCE3 1301 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 PARP14Q460N5 1801 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 TCRBV5S4A2TA0A5A2 114 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 VWA5AO00534 786 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 ADCY6O43306 1168 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 EEF2P13639 858 aaKnown RBP10.84□□□□□ -0.67
SRRM1-217ENST00000490543 CDK7P50613 346 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 AKNAD1Q5T1N1 836 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 PPP2R2DQ66LE6 453 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 TMED8Q6PL24 325 aaPredicted RBP10.84□□□□□ -0.67
SRRM1-217ENST00000490543 ZNF365Q70YC5 407 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 ARMC2Q8NEN0 867 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 REPS2Q8NFH8 660 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 NUP133Q8WUM0 1156 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 ARMT1Q9H993 441 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 SWAP70Q9UH65 585 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 CNPY2Q9Y2B0 182 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 EXOC6BQ9Y2D4 811 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 ROBO3Q96MS0 1386 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 NAV1Q8NEY1 1877 aa10.84□□□□□ -0.67
SRRM1-217ENST00000490543 IGFBP4P22692 258 aa10.83□□□□□ -0.68
SRRM1-217ENST00000490543 CDK8P49336 464 aa10.83□□□□□ -0.68
SRRM1-217ENST00000490543 MRPS5P82675 430 aaKnown RBP10.83□□□□□ -0.68
SRRM1-217ENST00000490543 AGERQ15109 404 aa10.83□□□□□ -0.68
SRRM1-217ENST00000490543 FAM83BQ5T0W9 1011 aa10.83□□□□□ -0.68
SRRM1-217ENST00000490543 ZKSCAN2Q63HK3 967 aa10.83□□□□□ -0.68
SRRM1-217ENST00000490543 BPHLQ86WA6 291 aaPredicted RBP10.83□□□□□ -0.68
SRRM1-217ENST00000490543 NECAB3Q96P71 396 aaPredicted RBP10.83□□□□□ -0.68
SRRM1-217ENST00000490543 UHRF1Q96T88 793 aaPredicted RBP10.83□□□□□ -0.68
SRRM1-217ENST00000490543 PPP1R12CQ9BZL4 782 aa10.83□□□□□ -0.68
SRRM1-217ENST00000490543 IL1RAPL2Q9NP60 686 aa10.83□□□□□ -0.68
SRRM1-217ENST00000490543 CXXC1Q9P0U4 656 aaPredicted RBP10.83□□□□□ -0.68
SRRM1-217ENST00000490543 THEGQ9P2T0 379 aa10.83□□□□□ -0.68
SRRM1-217ENST00000490543 ZHX1Q9UKY1 873 aaPredicted RBP10.83□□□□□ -0.68
SRRM1-217ENST00000490543 FAM184BQ9ULE4 1060 aa10.83□□□□□ -0.68
SRRM1-217ENST00000490543 PPP1R9AQ9ULJ8 1098 aa10.83□□□□□ -0.68
SRRM1-217ENST00000490543 RIPK3Q9Y572 518 aa10.83□□□□□ -0.68
SRRM1-217ENST00000490543 GOLIM4O00461 696 aa10.82□□□□□ -0.68
SRRM1-217ENST00000490543 RAD21O60216 631 aa10.82□□□□□ -0.68
SRRM1-217ENST00000490543 DUSP11O75319 330 aaKnown RBP10.82□□□□□ -0.68
SRRM1-217ENST00000490543 CHGBP05060 677 aa10.82□□□□□ -0.68
SRRM1-217ENST00000490543 ASGR1P07306 291 aa10.82□□□□□ -0.68
SRRM1-217ENST00000490543 C6orf222P0C671 652 aaPredicted RBP10.82□□□□□ -0.68
SRRM1-217ENST00000490543 RLBP1P12271 317 aa10.82□□□□□ -0.68
SRRM1-217ENST00000490543 CYP2C18P33260 490 aa10.82□□□□□ -0.68
SRRM1-217ENST00000490543 PPIGQ13427 754 aaKnown RBP eCLIP10.82□□□□□ -0.681e-13■■□□□ 14.5
SRRM1-217ENST00000490543 C12orf60Q5U649 245 aa10.82□□□□□ -0.68
SRRM1-217ENST00000490543 LRRN4Q8WUT4 740 aa10.82□□□□□ -0.68
SRRM1-217ENST00000490543 VTI1AQ96AJ9 217 aa10.82□□□□□ -0.68
SRRM1-217ENST00000490543 GLT1D1Q96MS3 346 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms