RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 OPLAHO14841 1288 aa10.62□□□□□ -0.71
ECM1-205ENST00000490346 SNAI1O95863 264 aaPredicted RBP10.62□□□□□ -0.71
ECM1-205ENST00000490346 CNGA1P29973 690 aa10.62□□□□□ -0.71
ECM1-205ENST00000490346 PDIA3P30101 505 aaKnown RBP10.62□□□□□ -0.71
ECM1-205ENST00000490346 GJA8P48165 433 aa10.62□□□□□ -0.71
ECM1-205ENST00000490346 NEK4P51957 841 aa10.62□□□□□ -0.71
ECM1-205ENST00000490346 CCT2P78371 535 aaKnown RBP10.62□□□□□ -0.71
ECM1-205ENST00000490346 TRAF1Q13077 416 aa10.62□□□□□ -0.71
ECM1-205ENST00000490346 MAMDC4Q6UXC1 1216 aa10.62□□□□□ -0.71
ECM1-205ENST00000490346 ARMCX2Q7L311 632 aa10.62□□□□□ -0.71
ECM1-205ENST00000490346 MCF2L2Q86YR7 1114 aa10.62□□□□□ -0.71
ECM1-205ENST00000490346 MSL3Q8N5Y2 521 aaKnown RBP10.62□□□□□ -0.71
ECM1-205ENST00000490346 RGS22Q8NE09 1264 aa10.62□□□□□ -0.71
ECM1-205ENST00000490346 U2AF1L4Q8WU68 220 aaKnown RBP10.62□□□□□ -0.71
ECM1-205ENST00000490346 NCOA5Q9HCD5 579 aaKnown RBP10.62□□□□□ -0.71
ECM1-205ENST00000490346 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.62□□□□□ -0.71
ECM1-205ENST00000490346 SGPL1O95470 568 aa10.61□□□□□ -0.71
ECM1-205ENST00000490346 CFBP00751 764 aa10.61□□□□□ -0.71
ECM1-205ENST00000490346 ALDH5A1P51649 535 aaPredicted RBP10.61□□□□□ -0.71
ECM1-205ENST00000490346 AK2P54819 239 aa10.61□□□□□ -0.71
ECM1-205ENST00000490346 STK3Q13188 491 aa10.61□□□□□ -0.71
ECM1-205ENST00000490346 PPP2R5BQ15173 497 aa10.61□□□□□ -0.71
ECM1-205ENST00000490346 NOL8Q76FK4 1167 aaKnown RBP10.61□□□□□ -0.71
ECM1-205ENST00000490346 HEATR3Q7Z4Q2 680 aa10.61□□□□□ -0.71
ECM1-205ENST00000490346 SYTL5Q8TDW5 730 aaPredicted RBP10.61□□□□□ -0.71
ECM1-205ENST00000490346 SHISA4Q96DD7 197 aa10.61□□□□□ -0.71
ECM1-205ENST00000490346 ZNF274Q96GC6 653 aaPredicted RBP10.61□□□□□ -0.71
ECM1-205ENST00000490346 ALDH8A1Q9H2A2 487 aaPredicted RBP10.61□□□□□ -0.71
ECM1-205ENST00000490346 UPF2Q9HAU5 1272 aaKnown RBP10.61□□□□□ -0.71
ECM1-205ENST00000490346 COL20A1Q9P218 1284 aa10.61□□□□□ -0.71
ECM1-205ENST00000490346 ADD3Q9UEY8 706 aaKnown RBP10.61□□□□□ -0.71
ECM1-205ENST00000490346 ZHX1Q9UKY1 873 aaPredicted RBP10.61□□□□□ -0.71
ECM1-205ENST00000490346 TPCN1Q9ULQ1 816 aa10.61□□□□□ -0.71
ECM1-205ENST00000490346 CNPY2Q9Y2B0 182 aa10.61□□□□□ -0.71
ECM1-205ENST00000490346 V9GY48 417 aaPredicted RBP10.61□□□□□ -0.71
ECM1-205ENST00000490346 ASB14A6NK59 587 aa10.6□□□□□ -0.71
ECM1-205ENST00000490346 PPFIA3O75145 1194 aa10.6□□□□□ -0.71
ECM1-205ENST00000490346 TFRCP02786 760 aaKnown RBP10.6□□□□□ -0.71
ECM1-205ENST00000490346 ZNF865P0CJ78 1059 aaPredicted RBP10.6□□□□□ -0.71
ECM1-205ENST00000490346 HOXA13P31271 388 aaPredicted RBP10.6□□□□□ -0.71
ECM1-205ENST00000490346 RBM25P49756 843 aaKnown RBP10.6□□□□□ -0.71
ECM1-205ENST00000490346 HSD17B4P51659 736 aa10.6□□□□□ -0.71
ECM1-205ENST00000490346 NTRK3Q16288 839 aa10.6□□□□□ -0.71
ECM1-205ENST00000490346 ANO1Q5XXA6 986 aa10.6□□□□□ -0.71
ECM1-205ENST00000490346 GPKOWQ92917 476 aaPredicted RBP eCLIP10.6□□□□□ -0.71
ECM1-205ENST00000490346 PHKBQ93100 1093 aa10.6□□□□□ -0.71
ECM1-205ENST00000490346 TAAR1Q96RJ0 339 aa10.6□□□□□ -0.71
ECM1-205ENST00000490346 KIF2CQ99661 725 aa10.6□□□□□ -0.71
ECM1-205ENST00000490346 CRISPLD2Q9H0B8 497 aa10.6□□□□□ -0.71
ECM1-205ENST00000490346 DDX20Q9UHI6 824 aaKnown RBP10.6□□□□□ -0.71
ECM1-205ENST00000490346 NRBP1Q9UHY1 535 aa10.6□□□□□ -0.71
ECM1-205ENST00000490346 LRRC37A2A6NM11 1700 aa10.6□□□□□ -0.71
ECM1-205ENST00000490346 FRMPD3Q5JV73 1810 aa10.6□□□□□ -0.71
ECM1-205ENST00000490346 GCOM1H8Y6P7 765 aaPredicted RBP10.59□□□□□ -0.71
ECM1-205ENST00000490346 SEPT4O43236 478 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 POLR2MP0CAP2 368 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 GHRHRQ02643 423 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 ACVR2BQ13705 512 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 ANKRD1Q15327 319 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 LHX8Q68G74 356 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 WWC2Q6AWC2 1192 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 EEPD1Q7L9B9 569 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 DNERQ8NFT8 737 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 MORC4Q8TE76 937 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 LENG1Q96BZ8 264 aaPredicted RBP10.59□□□□□ -0.71
ECM1-205ENST00000490346 RMDN3Q96TC7 470 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 MAF1Q9H063 256 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 KATNBL1Q9H079 304 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 SLKQ9H2G2 1235 aaPredicted RBP10.59□□□□□ -0.71
ECM1-205ENST00000490346 ABHD16BQ9H3Z7 469 aa10.59□□□□□ -0.71
ECM1-205ENST00000490346 STXBP3O00186 592 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 CPLX1O14810 134 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 PRPF3O43395 683 aaKnown RBP10.58□□□□□ -0.72
ECM1-205ENST00000490346 MSCO60682 206 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 PFKFB2O60825 505 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 AKR1A1P14550 325 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 IFNAR1P17181 557 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 EIF2AK2P19525 551 aaKnown RBP10.58□□□□□ -0.72
ECM1-205ENST00000490346 EDNRBP24530 442 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 PDE4DQ08499 809 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 SCRN1Q12765 414 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 PFKFB3Q16875 520 aaPredicted RBP10.58□□□□□ -0.72
ECM1-205ENST00000490346 CCDC144BQ3MJ40 725 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 ARHGEF16Q5VV41 709 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 TYW1BQ6NUM6 668 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 USP17L6PQ6QN14 398 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 FCHSD1Q86WN1 690 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 FBXO16Q8IX29 292 aaPredicted RBP10.58□□□□□ -0.72
ECM1-205ENST00000490346 SAMD3Q8N6K7 520 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 NSUN6Q8TEA1 469 aaKnown RBP10.58□□□□□ -0.72
ECM1-205ENST00000490346 MPHOSPH6Q99547 160 aaKnown RBP10.58□□□□□ -0.72
ECM1-205ENST00000490346 SLC26A6Q9BXS9 759 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 BACH2Q9BYV9 841 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 MAP3K20Q9NYL2 800 aaKnown RBP10.58□□□□□ -0.72
ECM1-205ENST00000490346 OGDHLQ9ULD0 1010 aa10.58□□□□□ -0.72
ECM1-205ENST00000490346 LOC102724159A0A0B4J2E5 919 aa10.57□□□□□ -0.72
ECM1-205ENST00000490346 B4DLN1 442 aa10.57□□□□□ -0.72
ECM1-205ENST00000490346 ADCY6O43306 1168 aa10.57□□□□□ -0.72
ECM1-205ENST00000490346 FARP2O94887 1054 aaPredicted RBP10.57□□□□□ -0.72
ECM1-205ENST00000490346 LARGE1O95461 756 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms