RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 IRS1P35568 1242 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 EIF4A3P38919 411 aaKnown RBP5.31□□□□□ -1.56
RTN1-207ENST00000490111 HTR3AP46098 478 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 EIF4A1P60842 406 aaKnown RBP5.31□□□□□ -1.56
RTN1-207ENST00000490111 RPS8P62241 208 aaKnown RBP5.31□□□□□ -1.56
RTN1-207ENST00000490111 AIMP1Q12904 312 aaKnown RBP5.31□□□□□ -1.56
RTN1-207ENST00000490111 PDE3AQ14432 1141 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 MLC1Q15049 377 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 TAF7Q15545 349 aaPredicted RBP5.31□□□□□ -1.56
RTN1-207ENST00000490111 C21orf62-AS1Q17RA5 79 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 LRRC26Q2I0M4 334 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 C9orf50Q5SZB4 431 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 AKNAD1Q5T1N1 836 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 GET4Q7L5D6 327 aaPredicted RBP5.31□□□□□ -1.56
RTN1-207ENST00000490111 ZBTB33Q86T24 672 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 STAG2Q8N3U4 1231 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 AFAP1L2Q8N4X5 818 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 SLC39A7Q92504 469 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 CFAP53Q96M91 514 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 USB1Q9BQ65 265 aaKnown RBP5.31□□□□□ -1.56
RTN1-207ENST00000490111 RSPH9Q9H1X1 276 aaPredicted RBP5.31□□□□□ -1.56
RTN1-207ENST00000490111 ST7Q9NRC1 585 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 LUZP4Q9P127 313 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 TRMT112Q9UI30 125 aaKnown RBP5.31□□□□□ -1.56
RTN1-207ENST00000490111 PCDHB11Q9Y5F2 797 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 PIEZO1Q92508 2521 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 OTOFQ9HC10 1997 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 E2F8A0AVK6 867 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 PRPF3O43395 683 aaKnown RBP5.3□□□□□ -1.56
RTN1-207ENST00000490111 ST18O60284 1047 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 TRIM27P14373 513 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 SNAPC2Q13487 334 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 PWP1Q13610 501 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 VGLL4Q14135 290 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 SF3B3Q15393 1217 aaKnown RBP5.3□□□□□ -1.56
RTN1-207ENST00000490111 DLGAP5Q15398 846 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 MTERF2Q49AM1 385 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 CT47A1Q5JQC4 288 aaPredicted RBP5.3□□□□□ -1.56
RTN1-207ENST00000490111 AXDND1Q5T1B0 1012 aaPredicted RBP5.3□□□□□ -1.56
RTN1-207ENST00000490111 STRIP1Q5VSL9 837 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 KANK3Q6NY19 840 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 BLOC1S3Q6QNY0 202 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 ANKRD23Q86SG2 305 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 NLRP10Q86W26 655 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 ETFBKMTQ8IXQ9 262 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 MAGEB6Q8N7X4 407 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 ZBTB38Q8NAP3 1195 aaPredicted RBP5.3□□□□□ -1.56
RTN1-207ENST00000490111 EPS8L3Q8TE67 593 aaKnown RBP5.3□□□□□ -1.56
RTN1-207ENST00000490111 JARID2Q92833 1246 aaPredicted RBP5.3□□□□□ -1.56
RTN1-207ENST00000490111 PLEKHF1Q96S99 279 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 C2orf49Q9BVC5 232 aaPredicted RBP5.3□□□□□ -1.56
RTN1-207ENST00000490111 SRCIN1Q9C0H9 1055 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 IFT122Q9HBG6 1241 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 ACTR10Q9NZ32 417 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 OGDHLQ9ULD0 1010 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 DAAM1Q9Y4D1 1078 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 CSADQ9Y600 493 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 BDP1A6H8Y1 2624 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 MGAMO43451 1857 aa5.3□□□□□ -1.56
RTN1-207ENST00000490111 GOLGA6CA6NDK9 693 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 GOLGA6BA6NDN3 693 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 GSG1L2A8MUP6 293 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 PRR33A8MZF0 331 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 PRRT4C9JH25 899 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 PDHXO00330 501 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 IRS4O14654 1257 aaPredicted RBP5.29□□□□□ -1.56
RTN1-207ENST00000490111 MYO1BO43795 1136 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 PDE8AO60658 829 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 GOLGA6DP0CG33 693 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 BCRP11274 1271 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 APOBRQ0VD83 1088 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 CCDC85BQ15834 202 aaPredicted RBP5.29□□□□□ -1.56
RTN1-207ENST00000490111 AAK1Q2M2I8 961 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 GFOD2Q3B7J2 385 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 PROX2Q3B8N5 592 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 SMAP1Q8IYB5 467 aaPredicted RBP5.29□□□□□ -1.56
RTN1-207ENST00000490111 UBR7Q8N806 425 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 CCDC89Q8N998 374 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 SNRNP27Q8WVK2 155 aaKnown RBP5.29□□□□□ -1.56
RTN1-207ENST00000490111 CCDC74AQ96AQ1 378 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 TMEM74Q96NL1 305 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 GAS2L1Q99501 681 aaPredicted RBP5.29□□□□□ -1.56
RTN1-207ENST00000490111 KCNH6Q9H252 994 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 ZNF576Q9H609 170 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 VEZTQ9HBM0 779 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 GOLGA6AQ9NYA3 693 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 NOB1Q9ULX3 412 aaKnown RBP5.29□□□□□ -1.56
RTN1-207ENST00000490111 GTF2A1LQ9UNN4 478 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 NUDCQ9Y266 331 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 FRMD4BQ9Y2L6 1034 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 EYSQ5T1H1 3165 aa5.29□□□□□ -1.56
RTN1-207ENST00000490111 TCF20Q9UGU0 1960 aaKnown RBP5.28□□□□□ -1.56
RTN1-207ENST00000490111 CLRN2A0PK11 232 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 DYTNA2CJ06 578 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 F6X3S4 739 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 PI4K2BG5E9Z4 385 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 TNPO2O14787 897 aaKnown RBP5.28□□□□□ -1.56
RTN1-207ENST00000490111 BACH1O14867 736 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 NUDT7P0C024 238 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 CCNYL3P0C7X3 344 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms