RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 ZNF605Q86T29 641 aa8.09□□□□□ -1.11
CCDC39-206ENST00000489868 OSBP2Q969R2 916 aa8.09□□□□□ -1.11
CCDC39-206ENST00000489868 ZNF669Q96BR6 464 aaPredicted RBP8.09□□□□□ -1.11
CCDC39-206ENST00000489868 SPATA9Q9BWV2 254 aa8.09□□□□□ -1.11
CCDC39-206ENST00000489868 EPB41L4BQ9H329 900 aa8.09□□□□□ -1.11
CCDC39-206ENST00000489868 ZNF552Q9H707 407 aaPredicted RBP8.09□□□□□ -1.11
CCDC39-206ENST00000489868 DCP1AQ9NPI6 582 aaPredicted RBP8.09□□□□□ -1.11
CCDC39-206ENST00000489868 PDLIM7Q9NR12 457 aa8.09□□□□□ -1.11
CCDC39-206ENST00000489868 RWDD3Q9Y3V2 267 aa8.09□□□□□ -1.11
CCDC39-206ENST00000489868 LCP1P13796 627 aa8.08□□□□□ -1.12
CCDC39-206ENST00000489868 CORO7P57737 925 aa8.08□□□□□ -1.12
CCDC39-206ENST00000489868 FOXB2Q5VYV0 432 aa8.08□□□□□ -1.12
CCDC39-206ENST00000489868 MTA3Q9BTC8 594 aa8.08□□□□□ -1.12
CCDC39-206ENST00000489868 AARSD1Q9BTE6 412 aaKnown RBP8.08□□□□□ -1.12
CCDC39-206ENST00000489868 FBXL7Q9UJT9 491 aa8.08□□□□□ -1.12
CCDC39-206ENST00000489868 IQCA1LA6NCM1 817 aa8.07□□□□□ -1.12
CCDC39-206ENST00000489868 OR14I1A6ND48 311 aa8.07□□□□□ -1.12
CCDC39-206ENST00000489868 PRODHO43272 600 aa8.07□□□□□ -1.12
CCDC39-206ENST00000489868 KRT1P04264 644 aa8.07□□□□□ -1.12
CCDC39-206ENST00000489868 SSRP1Q08945 709 aaKnown RBP8.07□□□□□ -1.12
CCDC39-206ENST00000489868 HSP90AA2PQ14568 343 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-206ENST00000489868 TESK1Q15569 626 aa8.07□□□□□ -1.12
CCDC39-206ENST00000489868 PPIL6Q8IXY8 311 aa8.07□□□□□ -1.12
CCDC39-206ENST00000489868 UBXN4Q92575 508 aa8.07□□□□□ -1.12
CCDC39-206ENST00000489868 CCDC140Q96MF4 163 aa8.07□□□□□ -1.12
CCDC39-206ENST00000489868 SRPK1Q96SB4 655 aaKnown RBP8.07□□□□□ -1.12
CCDC39-206ENST00000489868 MCOLN1Q9GZU1 580 aa8.07□□□□□ -1.12
CCDC39-206ENST00000489868 OSBPL2Q9H1P3 480 aa8.07□□□□□ -1.12
CCDC39-206ENST00000489868 KLHL14Q9P2G3 628 aa8.07□□□□□ -1.12
CCDC39-206ENST00000489868 HCFC2Q9Y5Z7 792 aa8.07□□□□□ -1.12
CCDC39-206ENST00000489868 TRBV23OR9-2A0A075B6M9 112 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 A0A1W2PQ27 194 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 A0A1W2PQ64 194 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 A0A1W2PQC6 194 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 A0A1W2PQD8 194 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 NUDT19A8MXV4 375 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 FARP2O94887 1054 aaPredicted RBP8.06□□□□□ -1.12
CCDC39-206ENST00000489868 CPP00450 1065 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 FGFR1P11362 822 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 PABPC1P11940 636 aaKnown RBP8.06□□□□□ -1.12
CCDC39-206ENST00000489868 YBX1P67809 324 aaKnown RBP8.06□□□□□ -1.12
CCDC39-206ENST00000489868 MAP4K2Q12851 820 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 NTRK3Q16288 839 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 ACBD5Q5T8D3 534 aaPredicted RBP8.06□□□□□ -1.12
CCDC39-206ENST00000489868 SOGA3Q5TF21 947 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 RPTNQ6XPR3 784 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 LRP10Q7Z4F1 713 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 LRRC47Q8N1G4 583 aaKnown RBP8.06□□□□□ -1.12
CCDC39-206ENST00000489868 RCBTB1Q8NDN9 531 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 MKL1Q969V6 931 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 DNAJC7Q99615 494 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 LNPKQ9C0E8 428 aa8.06□□□□□ -1.12
CCDC39-206ENST00000489868 BLACEA4D250 179 aa8.05□□□□□ -1.12
CCDC39-206ENST00000489868 MEFVO15553 781 aaPredicted RBP8.05□□□□□ -1.12
CCDC39-206ENST00000489868 DBHP09172 617 aa8.05□□□□□ -1.12
CCDC39-206ENST00000489868 FAM153BP0C7A2 387 aa8.05□□□□□ -1.12
CCDC39-206ENST00000489868 GLI4P10075 376 aa8.05□□□□□ -1.12
CCDC39-206ENST00000489868 ARL4AP40617 200 aa8.05□□□□□ -1.12
CCDC39-206ENST00000489868 E4F1Q66K89 784 aaPredicted RBP8.05□□□□□ -1.12
CCDC39-206ENST00000489868 BICRALQ6AI39 1079 aa8.05□□□□□ -1.12
CCDC39-206ENST00000489868 FBXO15Q8NCQ5 510 aaPredicted RBP8.05□□□□□ -1.12
CCDC39-206ENST00000489868 DIO2Q92813 273 aa8.05□□□□□ -1.12
CCDC39-206ENST00000489868 KRTAP9-2Q9BYQ4 174 aa8.05□□□□□ -1.12
CCDC39-206ENST00000489868 RXFP1Q9HBX9 757 aa8.05□□□□□ -1.12
CCDC39-206ENST00000489868 PLA2G2DQ9UNK4 145 aa8.05□□□□□ -1.12
CCDC39-206ENST00000489868 NPFFR2Q9Y5X5 522 aa8.05□□□□□ -1.12
CCDC39-206ENST00000489868 TRAV20A0A0B4J274 112 aa8.04□□□□□ -1.12
CCDC39-206ENST00000489868 NPHS1O60500 1241 aa8.04□□□□□ -1.12
CCDC39-206ENST00000489868 VIPR1P32241 457 aa8.04□□□□□ -1.12
CCDC39-206ENST00000489868 BMS1Q14692 1282 aaKnown RBP8.04□□□□□ -1.12
CCDC39-206ENST00000489868 NLRP10Q86W26 655 aa8.04□□□□□ -1.12
CCDC39-206ENST00000489868 LZTR1Q8N653 840 aa8.04□□□□□ -1.12
CCDC39-206ENST00000489868 PLEKHO2Q8TD55 490 aa8.04□□□□□ -1.12
CCDC39-206ENST00000489868 KCTD13Q8WZ19 329 aa8.04□□□□□ -1.12
CCDC39-206ENST00000489868 SGPP1Q9BX95 441 aa8.04□□□□□ -1.12
CCDC39-206ENST00000489868 CDK11AQ9UQ88 783 aaPredicted RBP8.04□□□□□ -1.12
CCDC39-206ENST00000489868 KDM2BQ8NHM5 1336 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 SRGAP3O43295 1099 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 MSCO60682 206 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 FUCA1P04066 466 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 MPOP05164 745 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 C8AP07357 584 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 LTBRP36941 435 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 TXKP42681 527 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 CBX2Q14781 532 aaPredicted RBP8.03□□□□□ -1.12
CCDC39-206ENST00000489868 RAB3GAP1Q15042 981 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 ZNF124Q15973 351 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 PLEKHN1Q494U1 663 aaPredicted RBP8.03□□□□□ -1.12
CCDC39-206ENST00000489868 FAM209AQ5JX71 171 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 NSMFQ6X4W1 530 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 SYDE1Q6ZW31 735 aaPredicted RBP8.03□□□□□ -1.12
CCDC39-206ENST00000489868 TEX2Q8IWB9 1127 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 ZBTB38Q8NAP3 1195 aaPredicted RBP8.03□□□□□ -1.12
CCDC39-206ENST00000489868 FAM84AQ96KN4 292 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 EXOC2Q96KP1 924 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 GCM1Q9NP62 436 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 BTG4Q9NY30 223 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 MARCH2Q9P0N8 246 aa8.03□□□□□ -1.12
CCDC39-206ENST00000489868 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.02□□□□□ -1.13
CCDC39-206ENST00000489868 PEX10O60683 326 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms