RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 THEGQ9P2T0 379 aa17.75■□□□□ 0.43
FAM3D-204ENST00000489857 NFIBO00712 420 aa17.74■□□□□ 0.43
FAM3D-204ENST00000489857 ORC4O43929 436 aa17.74■□□□□ 0.43
FAM3D-204ENST00000489857 FGRP09769 529 aa17.74■□□□□ 0.43
FAM3D-204ENST00000489857 IGFBP4P22692 258 aa17.74■□□□□ 0.43
FAM3D-204ENST00000489857 ALDH5A1P51649 535 aaPredicted RBP17.74■□□□□ 0.43
FAM3D-204ENST00000489857 BTNL9Q6UXG8 535 aa17.74■□□□□ 0.43
FAM3D-204ENST00000489857 ASB2Q96Q27 587 aa17.74■□□□□ 0.43
FAM3D-204ENST00000489857 TRMT13Q9NUP7 481 aaKnown RBP17.74■□□□□ 0.43
FAM3D-204ENST00000489857 CYP2C9P11712 490 aa17.73■□□□□ 0.43
FAM3D-204ENST00000489857 MYOGP15173 224 aa17.73■□□□□ 0.43
FAM3D-204ENST00000489857 SYDE2Q5VT97 1194 aa17.73■□□□□ 0.43
FAM3D-204ENST00000489857 WDR11Q9BZH6 1224 aa17.73■□□□□ 0.43
FAM3D-204ENST00000489857 SLC4A7Q9Y6M7 1214 aa17.73■□□□□ 0.43
FAM3D-204ENST00000489857 MYO9BQ13459 2157 aa17.72■□□□□ 0.43
FAM3D-204ENST00000489857 GBF1Q92538 1859 aa17.72■□□□□ 0.43
FAM3D-204ENST00000489857 RBM47A0AV96 593 aaKnown RBP17.72■□□□□ 0.43
FAM3D-204ENST00000489857 PURAQ00577 322 aaKnown RBP17.72■□□□□ 0.43
FAM3D-204ENST00000489857 SLC30A10Q6XR72 485 aa17.72■□□□□ 0.43
FAM3D-204ENST00000489857 RPUSD2Q8IZ73 545 aaKnown RBP17.72■□□□□ 0.43
FAM3D-204ENST00000489857 TMEM47Q9BQJ4 181 aa17.72■□□□□ 0.43
FAM3D-204ENST00000489857 GPCPD1Q9NPB8 672 aa17.72■□□□□ 0.43
FAM3D-204ENST00000489857 POLR3EQ9NVU0 708 aa17.72■□□□□ 0.43
FAM3D-204ENST00000489857 ADD3Q9UEY8 706 aaKnown RBP17.72■□□□□ 0.43
FAM3D-204ENST00000489857 TNKSO95271 1327 aa17.72■□□□□ 0.43
FAM3D-204ENST00000489857 FRMPD2Q68DX3 1309 aaPredicted RBP17.72■□□□□ 0.43
FAM3D-204ENST00000489857 LOC102724159A0A0B4J2E5 919 aa17.71■□□□□ 0.43
FAM3D-204ENST00000489857 PTPDC1A2A3K4 754 aa17.71■□□□□ 0.43
FAM3D-204ENST00000489857 ZBBXA8MT70 800 aa17.71■□□□□ 0.43
FAM3D-204ENST00000489857 MYL3P08590 195 aa17.71■□□□□ 0.43
FAM3D-204ENST00000489857 TOP1P11387 765 aaKnown RBP17.71■□□□□ 0.43
FAM3D-204ENST00000489857 MRPS5P82675 430 aaKnown RBP17.71■□□□□ 0.43
FAM3D-204ENST00000489857 TTLL4Q14679 1199 aa17.71■□□□□ 0.43
FAM3D-204ENST00000489857 PWP2Q15269 919 aaKnown RBP17.71■□□□□ 0.43
FAM3D-204ENST00000489857 ALX1Q15699 326 aa17.71■□□□□ 0.43
FAM3D-204ENST00000489857 PPP2R2DQ66LE6 453 aa17.71■□□□□ 0.43
FAM3D-204ENST00000489857 ADAMTS19Q8TE59 1207 aa17.71■□□□□ 0.43
FAM3D-204ENST00000489857 CLEC4DQ8WXI8 215 aa17.71■□□□□ 0.43
FAM3D-204ENST00000489857 PCDHA11Q9Y5I1 949 aa17.71■□□□□ 0.43
FAM3D-204ENST00000489857 MUC3AQ02505 3323 aa17.71■□□□□ 0.43
FAM3D-204ENST00000489857 SUPT20HL2P0C7V6 817 aa17.7■□□□□ 0.42
FAM3D-204ENST00000489857 ATP2A2P16615 1042 aaKnown RBP17.7■□□□□ 0.42
FAM3D-204ENST00000489857 CALML3P27482 149 aa17.7■□□□□ 0.42
FAM3D-204ENST00000489857 OR6J1Q8NGC5 347 aa17.7■□□□□ 0.42
FAM3D-204ENST00000489857 PPP1R13LQ8WUF5 828 aa17.7■□□□□ 0.42
FAM3D-204ENST00000489857 TOMM22Q9NS69 142 aa17.7■□□□□ 0.42
FAM3D-204ENST00000489857 CHD7Q9P2D1 2997 aa17.7■□□□□ 0.42
FAM3D-204ENST00000489857 FGAP02671 866 aa17.69■□□□□ 0.42
FAM3D-204ENST00000489857 PDHBP11177 359 aa17.69■□□□□ 0.42
FAM3D-204ENST00000489857 CPT1AP50416 773 aa17.69■□□□□ 0.42
FAM3D-204ENST00000489857 RRP12Q5JTH9 1297 aaKnown RBP17.69■□□□□ 0.42
FAM3D-204ENST00000489857 DEFB128Q7Z7B8 93 aa17.69■□□□□ 0.42
FAM3D-204ENST00000489857 EVI5LQ96CN4 794 aa17.69■□□□□ 0.42
FAM3D-204ENST00000489857 FAM227BQ96M60 508 aa17.69■□□□□ 0.42
FAM3D-204ENST00000489857 MTG1Q9BT17 334 aaPredicted RBP17.69■□□□□ 0.42
FAM3D-204ENST00000489857 HELLSQ9NRZ9 838 aa17.69■□□□□ 0.42
FAM3D-204ENST00000489857 TCP11L1Q9NUJ3 509 aa17.69■□□□□ 0.42
FAM3D-204ENST00000489857 A0A0D9SFI3 127 aa17.68■□□□□ 0.42
FAM3D-204ENST00000489857 PFKMP08237 780 aa17.68■□□□□ 0.42
FAM3D-204ENST00000489857 COL9A1P20849 921 aa17.68■□□□□ 0.42
FAM3D-204ENST00000489857 EDNRBP24530 442 aa17.68■□□□□ 0.42
FAM3D-204ENST00000489857 NBPF20Q3BBV1 942 aa17.68■□□□□ 0.42
FAM3D-204ENST00000489857 RNF207Q6ZRF8 634 aa17.68■□□□□ 0.42
FAM3D-204ENST00000489857 COPS5Q92905 334 aa17.68■□□□□ 0.42
FAM3D-204ENST00000489857 UHRF1Q96T88 793 aaPredicted RBP17.68■□□□□ 0.42
FAM3D-204ENST00000489857 RPS6P62753 249 aaKnown RBP17.67■□□□□ 0.42
FAM3D-204ENST00000489857 PDE4DQ08499 809 aa17.67■□□□□ 0.42
FAM3D-204ENST00000489857 ZNF543Q08ER8 600 aa17.67■□□□□ 0.42
FAM3D-204ENST00000489857 PPP2R5BQ15173 497 aa17.67■□□□□ 0.42
FAM3D-204ENST00000489857 FAM47CQ5HY64 1035 aa17.67■□□□□ 0.42
FAM3D-204ENST00000489857 MICALL1Q8N3F8 863 aa17.67■□□□□ 0.42
FAM3D-204ENST00000489857 GPHNQ9NQX3 736 aaPredicted RBP17.67■□□□□ 0.42
FAM3D-204ENST00000489857 WDR19Q8NEZ3 1342 aa17.67■□□□□ 0.42
FAM3D-204ENST00000489857 SCN10AQ9Y5Y9 1956 aa17.66■□□□□ 0.42
FAM3D-204ENST00000489857 A6NJR5 290 aa17.66■□□□□ 0.42
FAM3D-204ENST00000489857 RFXAPO00287 272 aa17.66■□□□□ 0.42
FAM3D-204ENST00000489857 NKRFO15226 690 aaKnown RBP eCLIP17.66■□□□□ 0.42
FAM3D-204ENST00000489857 CA3P07451 260 aa17.66■□□□□ 0.42
FAM3D-204ENST00000489857 SNHG28P0DPA3 235 aa17.66■□□□□ 0.42
FAM3D-204ENST00000489857 HAND2P61296 217 aa17.66■□□□□ 0.42
FAM3D-204ENST00000489857 TMEM67Q5HYA8 995 aa17.66■□□□□ 0.42
FAM3D-204ENST00000489857 ANKRD45Q5TZF3 282 aa17.66■□□□□ 0.42
FAM3D-204ENST00000489857 ZNF589Q86UQ0 364 aaPredicted RBP17.66■□□□□ 0.42
FAM3D-204ENST00000489857 SCFD2Q8WU76 684 aa17.66■□□□□ 0.42
FAM3D-204ENST00000489857 ZMYM6O95789 1325 aa17.66■□□□□ 0.42
FAM3D-204ENST00000489857 BDP1A6H8Y1 2624 aa17.66■□□□□ 0.42
FAM3D-204ENST00000489857 NCOR1O75376 2440 aa17.65■□□□□ 0.42
FAM3D-204ENST00000489857 ARIH2O95376 493 aa17.65■□□□□ 0.42
FAM3D-204ENST00000489857 IQCF3P0C7M6 154 aa17.65■□□□□ 0.42
FAM3D-204ENST00000489857 HSPD1P10809 573 aaKnown RBP17.65■□□□□ 0.42
FAM3D-204ENST00000489857 PDE1AP54750 535 aa17.65■□□□□ 0.42
FAM3D-204ENST00000489857 MCMDC2Q4G0Z9 681 aa17.65■□□□□ 0.42
FAM3D-204ENST00000489857 BRDTQ58F21 947 aaPredicted RBP17.65■□□□□ 0.42
FAM3D-204ENST00000489857 NFRKBQ6P4R8 1299 aa17.65■□□□□ 0.42
FAM3D-204ENST00000489857 DNERQ8NFT8 737 aa17.65■□□□□ 0.42
FAM3D-204ENST00000489857 CERS4Q9HA82 394 aa17.65■□□□□ 0.42
FAM3D-204ENST00000489857 RAPGEFL1Q9UHV5 662 aa17.65■□□□□ 0.42
FAM3D-204ENST00000489857 PNMA2Q9UL42 364 aa17.65■□□□□ 0.42
FAM3D-204ENST00000489857 SCN5AQ14524 2016 aa17.65■□□□□ 0.42
FAM3D-204ENST00000489857 EPOPA6NHQ4 379 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms