RNA–Protein interactions for RNA: ENST00000489769.1

SERPINA1-210, Transcript of serpin family A member 1, humanhuman

TSL 1 (best)

Gene SERPINA1, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-210ENST00000489769 USP6NLQ92738 828 aa13.17□□□□□ -0.3
SERPINA1-210ENST00000489769 MRPL11Q9Y3B7 192 aaKnown RBP13.17□□□□□ -0.3
SERPINA1-210ENST00000489769 PRPF3O43395 683 aaKnown RBP13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 ADCY3O60266 1144 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 CALML3P27482 149 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 RGS2P41220 211 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 AKAP17AQ02040 695 aaKnown RBP13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 CCDC173Q0VFZ6 552 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 PKN1Q16512 942 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 WWC2Q6AWC2 1192 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 SLC30A10Q6XR72 485 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 RNF207Q6ZRF8 634 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 SOCS4Q8WXH5 440 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 ZSCAN31Q96LW9 406 aaPredicted RBP13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 AIFM3Q96NN9 605 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 MCOLN1Q9GZU1 580 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 CYP39A1Q9NYL5 469 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 FLRT1Q9NZU1 646 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 PNMA2Q9UL42 364 aa13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 DDX49Q9Y6V7 483 aaKnown RBP13.16□□□□□ -0.3
SERPINA1-210ENST00000489769 CFBP00751 764 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 MYCP01106 439 aaPredicted RBP13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 HOXA13P31271 388 aaPredicted RBP13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 TYW1BQ6NUM6 668 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 CPLX2Q6PUV4 134 aaKnown RBP13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 TRIM22Q8IYM9 498 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 ABRAQ8N0Z2 381 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 SH3TC2Q8TF17 1288 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 ANP32BQ92688 251 aaKnown RBP13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 TRIM44Q96DX7 344 aaPredicted RBP13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 POTEB2H3BUK9 544 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 JAK2O60674 1132 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 SCG2P13521 617 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 MCM2P49736 904 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 PRMT2P55345 433 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 RPS6P62753 249 aaKnown RBP13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 TRIM32Q13049 653 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 PFKFB3Q16875 520 aaPredicted RBP13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 FBXO46Q6PJ61 603 aaPredicted RBP13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 TRIB2Q92519 343 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 TMX3Q96JJ7 454 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 APBA2Q99767 749 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 RNF26Q9BY78 433 aaPredicted RBP13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 PANK2Q9BZ23 570 aa13.15□□□□□ -0.3
SERPINA1-210ENST00000489769 PFASO15067 1338 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 DNAJC25-GNG10A0A024R161 153 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 SOWAHBA6NEL2 793 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 ESPNB1AK53 854 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 STXBP3O00186 592 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 CDKL5O76039 1030 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 BAG4O95429 457 aaKnown RBP13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 GRK4P32298 578 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 FOSBP53539 338 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 NAPAP54920 295 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 ZNF445P59923 1031 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 TRAF1Q13077 416 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 IRF5Q13568 498 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 PKN2Q16513 984 aaKnown RBP13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 ZNF792Q3KQV3 632 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 NSUN7Q8NE18 718 aaKnown RBP13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 MAML3Q96JK9 1138 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 SH2B1Q9NRF2 756 aaPredicted RBP13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 COL20A1Q9P218 1284 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 BIN2Q9UBW5 565 aaPredicted RBP13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 KIAA1217Q5T5P2 1943 aa13.14□□□□□ -0.31
SERPINA1-210ENST00000489769 HOXC6P09630 235 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 XRCC5P13010 732 aaKnown RBP13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 FDPSP14324 419 aaKnown RBP13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 CYP2C19P33261 490 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 SLC9C1Q4G0N8 1177 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 USP17L6PQ6QN14 398 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.13□□□□□ -0.311e-7■■■□□ 16.6
SERPINA1-210ENST00000489769 FCHSD1Q86WN1 690 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 MCF2L2Q86YR7 1114 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 FAM133AQ8N9E0 248 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 SHISA4Q96DD7 197 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 FGD4Q96M96 766 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 TAAR1Q96RJ0 339 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 PPP1R9BQ96SB3 815 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 PSTPIP2Q9H939 334 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 BARHL2Q9NY43 387 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 SLC5A4Q9NY91 659 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 VPS54Q9P1Q0 977 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 ORC3Q9UBD5 711 aaPredicted RBP13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 KIAA0100Q14667 2235 aaKnown RBP13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 ASTN1O14525 1302 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 MYH7BA7E2Y1 1941 aa13.13□□□□□ -0.31
SERPINA1-210ENST00000489769 SMCO2A6NFE2 343 aa13.12□□□□□ -0.31
SERPINA1-210ENST00000489769 ADAMTS3O15072 1205 aa13.12□□□□□ -0.31
SERPINA1-210ENST00000489769 DEXIO95424 95 aa13.12□□□□□ -0.31
SERPINA1-210ENST00000489769 UBE2SQ16763 222 aa13.12□□□□□ -0.31
SERPINA1-210ENST00000489769 HS1BP3Q53T59 392 aa13.12□□□□□ -0.31
SERPINA1-210ENST00000489769 PRAMEF19Q5SWL8 479 aa13.12□□□□□ -0.31
SERPINA1-210ENST00000489769 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
SERPINA1-210ENST00000489769 SYTL5Q8TDW5 730 aaPredicted RBP13.12□□□□□ -0.31
SERPINA1-210ENST00000489769 GJB4Q9NTQ9 266 aa13.12□□□□□ -0.31
SERPINA1-210ENST00000489769 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
SERPINA1-210ENST00000489769 GCOM1H8Y6P7 765 aaPredicted RBP13.11□□□□□ -0.31
SERPINA1-210ENST00000489769 MEIS2O14770 477 aa13.11□□□□□ -0.31
SERPINA1-210ENST00000489769 POLR2MP0CAP2 368 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms