RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 TTBK2Q6IQ55 1244 aa15.33■□□□□ 0.04
LTA-216ENST00000489638 DCAF4Q8WV16 495 aa15.33■□□□□ 0.04
LTA-216ENST00000489638 SCLYQ96I15 445 aa15.33■□□□□ 0.04
LTA-216ENST00000489638 TRMT13Q9NUP7 481 aaKnown RBP15.33■□□□□ 0.04
LTA-216ENST00000489638 ANAPC4Q9UJX5 808 aa15.33■□□□□ 0.04
LTA-216ENST00000489638 MTMR7Q9Y216 660 aa15.33■□□□□ 0.04
LTA-216ENST00000489638 PCDHA11Q9Y5I1 949 aa15.33■□□□□ 0.04
LTA-216ENST00000489638 SLC4A7Q9Y6M7 1214 aa15.33■□□□□ 0.04
LTA-216ENST00000489638 TNKSO95271 1327 aa15.32■□□□□ 0.04
LTA-216ENST00000489638 NFIBO00712 420 aa15.32■□□□□ 0.04
LTA-216ENST00000489638 ORC4O43929 436 aa15.32■□□□□ 0.04
LTA-216ENST00000489638 CYP2C9P11712 490 aa15.32■□□□□ 0.04
LTA-216ENST00000489638 SLC16A2P36021 539 aa15.32■□□□□ 0.04
LTA-216ENST00000489638 PURAQ00577 322 aaKnown RBP15.32■□□□□ 0.04
LTA-216ENST00000489638 BAATQ14032 418 aaPredicted RBP15.32■□□□□ 0.04
LTA-216ENST00000489638 VPS53Q5VIR6 699 aa15.32■□□□□ 0.04
LTA-216ENST00000489638 BTNL9Q6UXG8 535 aa15.32■□□□□ 0.04
LTA-216ENST00000489638 RPUSD2Q8IZ73 545 aaKnown RBP15.32■□□□□ 0.04
LTA-216ENST00000489638 SALL3Q9BXA9 1300 aa15.31■□□□□ 0.04
LTA-216ENST00000489638 LOC102724159A0A0B4J2E5 919 aa15.31■□□□□ 0.04
LTA-216ENST00000489638 RBM47A0AV96 593 aaKnown RBP15.31■□□□□ 0.04
LTA-216ENST00000489638 ZBBXA8MT70 800 aa15.31■□□□□ 0.04
LTA-216ENST00000489638 RANBP6O60518 1105 aaKnown RBP15.31■□□□□ 0.04
LTA-216ENST00000489638 PFKMP08237 780 aa15.31■□□□□ 0.04
LTA-216ENST00000489638 FGRP09769 529 aa15.31■□□□□ 0.04
LTA-216ENST00000489638 ATP2A2P16615 1042 aaKnown RBP15.31■□□□□ 0.04
LTA-216ENST00000489638 MX1P20591 662 aa15.31■□□□□ 0.04
LTA-216ENST00000489638 COL9A1P20849 921 aa15.31■□□□□ 0.04
LTA-216ENST00000489638 TTLL4Q14679 1199 aa15.31■□□□□ 0.04
LTA-216ENST00000489638 PWP2Q15269 919 aaKnown RBP15.31■□□□□ 0.04
LTA-216ENST00000489638 SYDE2Q5VT97 1194 aa15.31■□□□□ 0.04
LTA-216ENST00000489638 SLC30A10Q6XR72 485 aa15.31■□□□□ 0.04
LTA-216ENST00000489638 UHRF1Q96T88 793 aaPredicted RBP15.31■□□□□ 0.04
LTA-216ENST00000489638 WDR11Q9BZH6 1224 aa15.31■□□□□ 0.04
LTA-216ENST00000489638 POLR3EQ9NVU0 708 aa15.31■□□□□ 0.04
LTA-216ENST00000489638 ADD3Q9UEY8 706 aaKnown RBP15.31■□□□□ 0.04
LTA-216ENST00000489638 PCDHB15Q9Y5E8 787 aa15.31■□□□□ 0.04
LTA-216ENST00000489638 NCOR1O75376 2440 aa15.3■□□□□ 0.04
LTA-216ENST00000489638 TMEM47Q9BQJ4 181 aa15.3■□□□□ 0.04
LTA-216ENST00000489638 SCN10AQ9Y5Y9 1956 aa15.29■□□□□ 0.04
LTA-216ENST00000489638 FRMPD2Q68DX3 1309 aaPredicted RBP15.29■□□□□ 0.04
LTA-216ENST00000489638 PTPDC1A2A3K4 754 aa15.29■□□□□ 0.04
LTA-216ENST00000489638 BDP1A6H8Y1 2624 aa15.29■□□□□ 0.04
LTA-216ENST00000489638 MYL3P08590 195 aa15.29■□□□□ 0.04
LTA-216ENST00000489638 SUPT20HL2P0C7V6 817 aa15.29■□□□□ 0.04
LTA-216ENST00000489638 CPT1AP50416 773 aa15.29■□□□□ 0.04
LTA-216ENST00000489638 OR6J1Q8NGC5 347 aa15.29■□□□□ 0.04
LTA-216ENST00000489638 CLEC4DQ8WXI8 215 aa15.29■□□□□ 0.04
LTA-216ENST00000489638 MTG1Q9BT17 334 aaPredicted RBP15.29■□□□□ 0.04
LTA-216ENST00000489638 TANC1Q9C0D5 1861 aa15.28■□□□□ 0.04
LTA-216ENST00000489638 CA3P07451 260 aa15.28■□□□□ 0.04
LTA-216ENST00000489638 TOP1P11387 765 aaKnown RBP15.28■□□□□ 0.04
LTA-216ENST00000489638 EDNRBP24530 442 aa15.28■□□□□ 0.04
LTA-216ENST00000489638 ALX1Q15699 326 aa15.28■□□□□ 0.04
LTA-216ENST00000489638 DEFB128Q7Z7B8 93 aa15.28■□□□□ 0.04
LTA-216ENST00000489638 MICALL1Q8N3F8 863 aa15.28■□□□□ 0.04
LTA-216ENST00000489638 GPCPD1Q9NPB8 672 aa15.28■□□□□ 0.04
LTA-216ENST00000489638 RAPGEFL1Q9UHV5 662 aa15.28■□□□□ 0.04
LTA-216ENST00000489638 SCN5AQ14524 2016 aa15.28■□□□□ 0.04
LTA-216ENST00000489638 PDHBP11177 359 aa15.27■□□□□ 0.04
LTA-216ENST00000489638 CALML3P27482 149 aa15.27■□□□□ 0.04
LTA-216ENST00000489638 TFF2Q03403 129 aa15.27■□□□□ 0.04
LTA-216ENST00000489638 PPP2R5BQ15173 497 aa15.27■□□□□ 0.04
LTA-216ENST00000489638 NBPF20Q3BBV1 942 aa15.27■□□□□ 0.04
LTA-216ENST00000489638 TMEM67Q5HYA8 995 aa15.27■□□□□ 0.04
LTA-216ENST00000489638 RNF207Q6ZRF8 634 aa15.27■□□□□ 0.04
LTA-216ENST00000489638 IL27Q8NEV9 243 aa15.27■□□□□ 0.04
LTA-216ENST00000489638 PPP1R13LQ8WUF5 828 aa15.27■□□□□ 0.04
LTA-216ENST00000489638 NECAB3Q96P71 396 aaPredicted RBP15.27■□□□□ 0.04
LTA-216ENST00000489638 TSPYL2Q9H2G4 693 aaPredicted RBP15.27■□□□□ 0.04
LTA-216ENST00000489638 WDR19Q8NEZ3 1342 aa15.27■□□□□ 0.03
LTA-216ENST00000489638 EPOPA6NHQ4 379 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 A6NJR5 290 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 PITPNM1O00562 1244 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 BMP1P13497 986 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 POU3F3P20264 500 aaPredicted RBP15.26■□□□□ 0.03
LTA-216ENST00000489638 RFC2P35250 354 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 RPS6P62753 249 aaKnown RBP15.26■□□□□ 0.03
LTA-216ENST00000489638 FAM47CQ5HY64 1035 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 RRP12Q5JTH9 1297 aaKnown RBP15.26■□□□□ 0.03
LTA-216ENST00000489638 NFRKBQ6P4R8 1299 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 COPS5Q92905 334 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 SLC9A7Q96T83 725 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 GPHNQ9NQX3 736 aaPredicted RBP15.26■□□□□ 0.03
LTA-216ENST00000489638 HELLSQ9NRZ9 838 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 TOMM22Q9NS69 142 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 TCP11L1Q9NUJ3 509 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 ZMYM6O95789 1325 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 RAD50Q92878 1312 aa15.26■□□□□ 0.03
LTA-216ENST00000489638 A0A0D9SFI3 127 aa15.25■□□□□ 0.03
LTA-216ENST00000489638 RFXAPO00287 272 aa15.25■□□□□ 0.03
LTA-216ENST00000489638 NKRFO15226 690 aaKnown RBP eCLIP15.25■□□□□ 0.03
LTA-216ENST00000489638 ARHGEF15O94989 841 aa15.25■□□□□ 0.03
LTA-216ENST00000489638 FGAP02671 866 aa15.25■□□□□ 0.03
LTA-216ENST00000489638 IQCF3P0C7M6 154 aa15.25■□□□□ 0.03
LTA-216ENST00000489638 ACTN1P12814 892 aa15.25■□□□□ 0.03
LTA-216ENST00000489638 PDE4DQ08499 809 aa15.25■□□□□ 0.03
LTA-216ENST00000489638 ZNF543Q08ER8 600 aa15.25■□□□□ 0.03
LTA-216ENST00000489638 BRDTQ58F21 947 aaPredicted RBP15.25■□□□□ 0.03
LTA-216ENST00000489638 SCFD2Q8WU76 684 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms