RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 AP3B2Q13367 1082 aa15.92■□□□□ 0.14
C9orf3-221ENST00000489562 DIS3L2Q8IYB7 885 aaKnown RBP15.92■□□□□ 0.14
C9orf3-221ENST00000489562 ABRAQ8N0Z2 381 aa15.92■□□□□ 0.14
C9orf3-221ENST00000489562 DNAJC5GQ8N7S2 189 aa15.92■□□□□ 0.14
C9orf3-221ENST00000489562 GJB4Q9NTQ9 266 aa15.92■□□□□ 0.14
C9orf3-221ENST00000489562 IVNS1ABPQ9Y6Y0 642 aa15.92■□□□□ 0.14
C9orf3-221ENST00000489562 CFBP00751 764 aa15.91■□□□□ 0.14
C9orf3-221ENST00000489562 FOSP01100 380 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-221ENST00000489562 FCER1AP12319 257 aa15.91■□□□□ 0.14
C9orf3-221ENST00000489562 TAL1P17542 331 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-221ENST00000489562 GNL2Q13823 731 aaKnown RBP15.91■□□□□ 0.14
C9orf3-221ENST00000489562 KCTD2Q14681 263 aa15.91■□□□□ 0.14
C9orf3-221ENST00000489562 NPY5RQ15761 445 aa15.91■□□□□ 0.14
C9orf3-221ENST00000489562 WDR78Q5VTH9 848 aa15.91■□□□□ 0.14
C9orf3-221ENST00000489562 NSMFQ6X4W1 530 aa15.91■□□□□ 0.14
C9orf3-221ENST00000489562 RNF207Q6ZRF8 634 aa15.91■□□□□ 0.14
C9orf3-221ENST00000489562 ANKRD35Q8N283 1001 aa15.91■□□□□ 0.14
C9orf3-221ENST00000489562 PORCNQ9H237 461 aa15.91■□□□□ 0.14
C9orf3-221ENST00000489562 MTMR6Q9Y217 621 aa15.91■□□□□ 0.14
C9orf3-221ENST00000489562 CASP8AP2Q9UKL3 1982 aa15.9■□□□□ 0.14
C9orf3-221ENST00000489562 M0R2N6 131 aa15.9■□□□□ 0.14
C9orf3-221ENST00000489562 MEIS2O14770 477 aa15.9■□□□□ 0.14
C9orf3-221ENST00000489562 TBC1D8O95759 1140 aa15.9■□□□□ 0.14
C9orf3-221ENST00000489562 CLK2P49760 499 aaKnown RBP15.9■□□□□ 0.14
C9orf3-221ENST00000489562 KIF22Q14807 665 aa15.9■□□□□ 0.14
C9orf3-221ENST00000489562 KRT25Q7Z3Z0 450 aa15.9■□□□□ 0.14
C9orf3-221ENST00000489562 PLEKHH3Q7Z736 793 aa15.9■□□□□ 0.14
C9orf3-221ENST00000489562 MMP19Q99542 508 aa15.9■□□□□ 0.14
C9orf3-221ENST00000489562 EHMT1Q9H9B1 1298 aa15.9■□□□□ 0.14
C9orf3-221ENST00000489562 EFCC1Q9HA90 598 aa15.9■□□□□ 0.14
C9orf3-221ENST00000489562 A1CFQ9NQ94 594 aaKnown RBP15.9■□□□□ 0.14
C9orf3-221ENST00000489562 CYP39A1Q9NYL5 469 aa15.9■□□□□ 0.14
C9orf3-221ENST00000489562 CEP350Q5VT06 3117 aa15.89■□□□□ 0.13
C9orf3-221ENST00000489562 CCDC194A0A1B0GVG4 234 aa15.89■□□□□ 0.13
C9orf3-221ENST00000489562 SPDYE3A6NKU9 549 aa15.89■□□□□ 0.13
C9orf3-221ENST00000489562 BTBD18B2RXH4 712 aa15.89■□□□□ 0.13
C9orf3-221ENST00000489562 BRD1O95696 1058 aa15.89■□□□□ 0.13
C9orf3-221ENST00000489562 ZSCAN22P10073 491 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-221ENST00000489562 U2AF2P26368 475 aaKnown RBP eCLIP15.89■□□□□ 0.133e-12■□□□□ 9.6
C9orf3-221ENST00000489562 RPS6P62753 249 aaKnown RBP15.89■□□□□ 0.13
C9orf3-221ENST00000489562 SP3Q02447 781 aa15.89■□□□□ 0.13
C9orf3-221ENST00000489562 MCTP1Q6DN14 999 aa15.89■□□□□ 0.13
C9orf3-221ENST00000489562 BRAPQ7Z569 592 aa15.89■□□□□ 0.13
C9orf3-221ENST00000489562 GPR142Q7Z601 462 aa15.89■□□□□ 0.13
C9orf3-221ENST00000489562 ZSCAN16Q9H4T2 348 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-221ENST00000489562 WBP1LQ9NX94 342 aa15.89■□□□□ 0.13
C9orf3-221ENST00000489562 CHMP5Q9NZZ3 219 aa15.89■□□□□ 0.13
C9orf3-221ENST00000489562 SLC15A5A6NIM6 579 aa15.88■□□□□ 0.13
C9orf3-221ENST00000489562 FCGRTP55899 365 aa15.88■□□□□ 0.13
C9orf3-221ENST00000489562 LACTBP83111 547 aaPredicted RBP15.88■□□□□ 0.13
C9orf3-221ENST00000489562 BAATQ14032 418 aaPredicted RBP15.88■□□□□ 0.13
C9orf3-221ENST00000489562 UBE2SQ16763 222 aa15.88■□□□□ 0.13
C9orf3-221ENST00000489562 USP17L6PQ6QN14 398 aa15.88■□□□□ 0.13
C9orf3-221ENST00000489562 NOSTRINQ8IVI9 506 aa15.88■□□□□ 0.13
C9orf3-221ENST00000489562 SYTL5Q8TDW5 730 aaPredicted RBP15.88■□□□□ 0.13
C9orf3-221ENST00000489562 TNFRSF25Q93038 417 aa15.88■□□□□ 0.13
C9orf3-221ENST00000489562 R3HDMLQ9H3Y0 253 aa15.88■□□□□ 0.13
C9orf3-221ENST00000489562 BIN2Q9UBW5 565 aaPredicted RBP15.88■□□□□ 0.13
C9orf3-221ENST00000489562 PCDHA6Q9UN73 950 aa15.88■□□□□ 0.13
C9orf3-221ENST00000489562 PCDHA8Q9Y5H6 950 aa15.88■□□□□ 0.13
C9orf3-221ENST00000489562 LOC102724159A0A0B4J2E5 919 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 POTEB2H3BUK9 544 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 GPR25O00155 361 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 PTPREP23469 700 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 HOXA13P31271 388 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-221ENST00000489562 NR5A1Q13285 461 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 GRB14Q14449 540 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 ARHGEF6Q15052 776 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 NONOQ15233 471 aaKnown RBP eCLIP15.87■□□□□ 0.13
C9orf3-221ENST00000489562 PWP2Q15269 919 aaKnown RBP15.87■□□□□ 0.13
C9orf3-221ENST00000489562 JAKMIP3Q5VZ66 844 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 SLC30A10Q6XR72 485 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 FCHSD1Q86WN1 690 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 JMYQ8N9B5 988 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 DNERQ8NFT8 737 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 OXER1Q8TDS5 423 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 SOCS4Q8WXH5 440 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 TBC1D5Q92609 795 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 ANO3Q9BYT9 981 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 SLC5A4Q9NY91 659 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 ADD3Q9UEY8 706 aaKnown RBP15.87■□□□□ 0.13
C9orf3-221ENST00000489562 ATP6V1DQ9Y5K8 247 aa15.87■□□□□ 0.13
C9orf3-221ENST00000489562 MCM3APO60318 1980 aa15.86■□□□□ 0.13
C9orf3-221ENST00000489562 DNAJC25-GNG10A0A024R161 153 aa15.86■□□□□ 0.13
C9orf3-221ENST00000489562 B4DLN1 442 aa15.86■□□□□ 0.13
C9orf3-221ENST00000489562 TNPO2O14787 897 aaKnown RBP15.86■□□□□ 0.13
C9orf3-221ENST00000489562 F13A1P00488 732 aa15.86■□□□□ 0.13
C9orf3-221ENST00000489562 FAM133AQ8N9E0 248 aa15.86■□□□□ 0.13
C9orf3-221ENST00000489562 RASGRP4Q8TDF6 673 aa15.86■□□□□ 0.13
C9orf3-221ENST00000489562 ERO1AQ96HE7 468 aa15.86■□□□□ 0.13
C9orf3-221ENST00000489562 MPHOSPH6Q99547 160 aaKnown RBP15.86■□□□□ 0.13
C9orf3-221ENST00000489562 TMEM260Q9NX78 707 aa15.86■□□□□ 0.13
C9orf3-221ENST00000489562 NOL7Q9UMY1 257 aaKnown RBP15.86■□□□□ 0.13
C9orf3-221ENST00000489562 ZSWIM8A7E2V4 1837 aa15.86■□□□□ 0.13
C9orf3-221ENST00000489562 FRMPD4Q14CM0 1322 aa15.86■□□□□ 0.13
C9orf3-221ENST00000489562 TCHHQ07283 1943 aa15.86■□□□□ 0.13
C9orf3-221ENST00000489562 KIF28PB7ZC32 967 aa15.85■□□□□ 0.13
C9orf3-221ENST00000489562 FKTNO75072 461 aa15.85■□□□□ 0.13
C9orf3-221ENST00000489562 GNRH1P01148 92 aa15.85■□□□□ 0.13
C9orf3-221ENST00000489562 ADORA2AP29274 412 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms